Initialize USB PHY after every Link controller reset

Cc: 3.16+ <stable@vger.kernel.org>
Cc: Tim Bird <tbird20d@gmail.com>
Signed-off-by: Peter Chen <peter.chen@freescale.com>
Signed-off-by: Ivan T. Ivanov <iivanov@mm-sol.com>
Signed-off-by: Greg Kroah-Hartman <gregkh@linuxfoundation.org>