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Boxiang Sun
cython
Commits
b9ffa8b7
Commit
b9ffa8b7
authored
Sep 23, 2008
by
Dag Sverre Seljebotn
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Plain Diff
Buffers: negative_indices option
parent
83198d1b
Changes
3
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3 changed files
with
56 additions
and
8 deletions
+56
-8
Cython/Compiler/Buffer.py
Cython/Compiler/Buffer.py
+15
-6
Cython/Compiler/PyrexTypes.py
Cython/Compiler/PyrexTypes.py
+2
-1
tests/run/bufaccess.pyx
tests/run/bufaccess.pyx
+39
-1
No files found.
Cython/Compiler/Buffer.py
View file @
b9ffa8b7
...
@@ -113,8 +113,8 @@ class IntroduceBufferAuxiliaryVars(CythonTransform):
...
@@ -113,8 +113,8 @@ class IntroduceBufferAuxiliaryVars(CythonTransform):
#
#
# Analysis
# Analysis
#
#
buffer_options
=
(
"dtype"
,
"ndim"
,
"mode"
)
# ordered!
buffer_options
=
(
"dtype"
,
"ndim"
,
"mode"
,
"negative_indices"
)
# ordered!
buffer_defaults
=
{
"ndim"
:
1
,
"mode"
:
"full"
}
buffer_defaults
=
{
"ndim"
:
1
,
"mode"
:
"full"
,
"negative_indices"
:
True
}
buffer_positional_options_count
=
1
# anything beyond this needs keyword argument
buffer_positional_options_count
=
1
# anything beyond this needs keyword argument
ERR_BUF_OPTION_UNKNOWN
=
'"%s" is not a buffer option'
ERR_BUF_OPTION_UNKNOWN
=
'"%s" is not a buffer option'
...
@@ -124,6 +124,7 @@ ERR_BUF_MISSING = '"%s" missing'
...
@@ -124,6 +124,7 @@ ERR_BUF_MISSING = '"%s" missing'
ERR_BUF_MODE
=
'Only allowed buffer modes are: "c", "fortran", "full", "strided" (as a compile-time string)'
ERR_BUF_MODE
=
'Only allowed buffer modes are: "c", "fortran", "full", "strided" (as a compile-time string)'
ERR_BUF_NDIM
=
'ndim must be a non-negative integer'
ERR_BUF_NDIM
=
'ndim must be a non-negative integer'
ERR_BUF_DTYPE
=
'dtype must be "object", numeric type or a struct'
ERR_BUF_DTYPE
=
'dtype must be "object", numeric type or a struct'
ERR_BUF_NEGATIVE_INDICES
=
'negative_indices must be a boolean'
def
analyse_buffer_options
(
globalpos
,
env
,
posargs
,
dictargs
,
defaults
=
None
,
need_complete
=
True
):
def
analyse_buffer_options
(
globalpos
,
env
,
posargs
,
dictargs
,
defaults
=
None
,
need_complete
=
True
):
"""
"""
...
@@ -178,6 +179,10 @@ def analyse_buffer_options(globalpos, env, posargs, dictargs, defaults=None, nee
...
@@ -178,6 +179,10 @@ def analyse_buffer_options(globalpos, env, posargs, dictargs, defaults=None, nee
if
mode
and
not
(
mode
in
(
'full'
,
'strided'
,
'c'
,
'fortran'
)):
if
mode
and
not
(
mode
in
(
'full'
,
'strided'
,
'c'
,
'fortran'
)):
raise
CompileError
(
globalpos
,
ERR_BUF_MODE
)
raise
CompileError
(
globalpos
,
ERR_BUF_MODE
)
negative_indices
=
options
.
get
(
"negative_indices"
)
if
mode
and
not
isinstance
(
negative_indices
,
bool
):
raise
CompileError
(
globalpos
,
ERR_BUF_NEGATIVE_INDICES
)
return
options
return
options
...
@@ -336,6 +341,7 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
...
@@ -336,6 +341,7 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
"""
"""
bufaux
=
entry
.
buffer_aux
bufaux
=
entry
.
buffer_aux
bufstruct
=
bufaux
.
buffer_info_var
.
cname
bufstruct
=
bufaux
.
buffer_info_var
.
cname
negative_indices
=
entry
.
type
.
negative_indices
if
options
[
'boundscheck'
]:
if
options
[
'boundscheck'
]:
# Check bounds and fix negative indices.
# Check bounds and fix negative indices.
...
@@ -349,9 +355,12 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
...
@@ -349,9 +355,12 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
if
signed
!=
0
:
if
signed
!=
0
:
# not unsigned, deal with negative index
# not unsigned, deal with negative index
code
.
putln
(
"if (%s < 0) {"
%
cname
)
code
.
putln
(
"if (%s < 0) {"
%
cname
)
if
negative_indices
:
code
.
putln
(
"%s += %s;"
%
(
cname
,
shape
.
cname
))
code
.
putln
(
"%s += %s;"
%
(
cname
,
shape
.
cname
))
code
.
putln
(
"if (%s) %s = %d;"
%
(
code
.
putln
(
"if (%s) %s = %d;"
%
(
code
.
unlikely
(
"%s < 0"
%
cname
),
tmp_cname
,
dim
))
code
.
unlikely
(
"%s < 0"
%
cname
),
tmp_cname
,
dim
))
else
:
code
.
putln
(
"%s = %d;"
%
(
tmp_cname
,
dim
))
code
.
put
(
"} else "
)
code
.
put
(
"} else "
)
# check bounds in positive direction
# check bounds in positive direction
code
.
putln
(
"if (%s) %s = %d;"
%
(
code
.
putln
(
"if (%s) %s = %d;"
%
(
...
@@ -364,7 +373,7 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
...
@@ -364,7 +373,7 @@ def put_buffer_lookup_code(entry, index_signeds, index_cnames, options, pos, cod
code
.
putln
(
code
.
error_goto
(
pos
))
code
.
putln
(
code
.
error_goto
(
pos
))
code
.
end_block
()
code
.
end_block
()
code
.
funcstate
.
release_temp
(
tmp_cname
)
code
.
funcstate
.
release_temp
(
tmp_cname
)
el
se
:
el
if
negative_indices
:
# Only fix negative indices.
# Only fix negative indices.
for
signed
,
cname
,
shape
in
zip
(
index_signeds
,
index_cnames
,
for
signed
,
cname
,
shape
in
zip
(
index_signeds
,
index_cnames
,
bufaux
.
shapevars
):
bufaux
.
shapevars
):
...
...
Cython/Compiler/PyrexTypes.py
View file @
b9ffa8b7
...
@@ -205,12 +205,13 @@ class BufferType(BaseType):
...
@@ -205,12 +205,13 @@ class BufferType(BaseType):
is_buffer
=
1
is_buffer
=
1
writable
=
True
writable
=
True
def
__init__
(
self
,
base
,
dtype
,
ndim
,
mode
):
def
__init__
(
self
,
base
,
dtype
,
ndim
,
mode
,
negative_indices
):
self
.
base
=
base
self
.
base
=
base
self
.
dtype
=
dtype
self
.
dtype
=
dtype
self
.
ndim
=
ndim
self
.
ndim
=
ndim
self
.
buffer_ptr_type
=
CPtrType
(
dtype
)
self
.
buffer_ptr_type
=
CPtrType
(
dtype
)
self
.
mode
=
mode
self
.
mode
=
mode
self
.
negative_indices
=
negative_indices
def
as_argument_type
(
self
):
def
as_argument_type
(
self
):
return
self
return
self
...
...
tests/run/bufaccess.pyx
View file @
b9ffa8b7
...
@@ -473,6 +473,25 @@ def list_comprehension(object[int] buf, len):
...
@@ -473,6 +473,25 @@ def list_comprehension(object[int] buf, len):
cdef
int
i
cdef
int
i
print
u"|"
.
join
([
unicode
(
buf
[
i
])
for
i
in
range
(
len
)])
print
u"|"
.
join
([
unicode
(
buf
[
i
])
for
i
in
range
(
len
)])
#
# The negative_indices buffer option
#
@
testcase
def
no_negative_indices
(
object
[
int
,
negative_indices
=
False
]
buf
,
int
idx
):
"""
The most interesting thing here is to inspect the C source and
make sure optimal code is produced.
>>> A = IntMockBuffer(None, range(6))
>>> no_negative_indices(A, 3)
3
>>> no_negative_indices(A, -1)
Traceback (most recent call last):
...
IndexError: Out of bounds on buffer access (axis 0)
"""
return
buf
[
idx
]
#
#
# Buffer type mismatch examples. Varying the type and access
# Buffer type mismatch examples. Varying the type and access
# method simultaneously, the odds of an interaction is virtually
# method simultaneously, the odds of an interaction is virtually
...
@@ -635,7 +654,7 @@ def safe_get(object[int] buf, int idx):
...
@@ -635,7 +654,7 @@ def safe_get(object[int] buf, int idx):
return
buf
[
idx
]
return
buf
[
idx
]
@
testcase
@
testcase
@
cython
.
boundscheck
(
False
)
@
cython
.
boundscheck
(
False
)
# outer decorators should take precedence
@
cython
.
boundscheck
(
True
)
@
cython
.
boundscheck
(
True
)
def
unsafe_get
(
object
[
int
]
buf
,
int
idx
):
def
unsafe_get
(
object
[
int
]
buf
,
int
idx
):
"""
"""
...
@@ -650,6 +669,18 @@ def unsafe_get(object[int] buf, int idx):
...
@@ -650,6 +669,18 @@ def unsafe_get(object[int] buf, int idx):
"""
"""
return
buf
[
idx
]
return
buf
[
idx
]
@
testcase
@
cython
.
boundscheck
(
False
)
def
unsafe_get_nonegative
(
object
[
int
,
negative_indices
=
False
]
buf
,
int
idx
):
"""
Also inspect the C source to see that it is optimal...
>>> A = IntMockBuffer(None, range(10), shape=(3,), offset=5)
>>> unsafe_get_nonegative(A, -2)
3
"""
return
buf
[
idx
]
@
testcase
@
testcase
def
mixed_get
(
object
[
int
]
buf
,
int
unsafe_idx
,
int
safe_idx
):
def
mixed_get
(
object
[
int
]
buf
,
int
unsafe_idx
,
int
safe_idx
):
"""
"""
...
@@ -1077,6 +1108,13 @@ cdef class IntMockBuffer(MockBuffer):
...
@@ -1077,6 +1108,13 @@ cdef class IntMockBuffer(MockBuffer):
cdef
get_itemsize
(
self
):
return
sizeof
(
int
)
cdef
get_itemsize
(
self
):
return
sizeof
(
int
)
cdef
get_default_format
(
self
):
return
b"@i"
cdef
get_default_format
(
self
):
return
b"@i"
cdef
class
UnsignedIntMockBuffer
(
MockBuffer
):
cdef
int
write
(
self
,
char
*
buf
,
object
value
)
except
-
1
:
(
<
unsigned
int
*>
buf
)[
0
]
=
<
unsigned
int
>
value
return
0
cdef
get_itemsize
(
self
):
return
sizeof
(
unsigned
int
)
cdef
get_default_format
(
self
):
return
b"@I"
cdef
class
ShortMockBuffer
(
MockBuffer
):
cdef
class
ShortMockBuffer
(
MockBuffer
):
cdef
int
write
(
self
,
char
*
buf
,
object
value
)
except
-
1
:
cdef
int
write
(
self
,
char
*
buf
,
object
value
)
except
-
1
:
(
<
short
*>
buf
)[
0
]
=
<
short
>
value
(
<
short
*>
buf
)[
0
]
=
<
short
>
value
...
...
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