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Boxiang Sun
cython
Commits
dca00ef2
Commit
dca00ef2
authored
Sep 05, 2011
by
Mark Florisson
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memslice support for cython.parallel
parent
55fa9f1f
Changes
5
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Showing
5 changed files
with
52 additions
and
7 deletions
+52
-7
Cython/Compiler/Nodes.py
Cython/Compiler/Nodes.py
+8
-3
Cython/Compiler/ParseTreeTransforms.py
Cython/Compiler/ParseTreeTransforms.py
+2
-1
Cython/Compiler/PyrexTypes.py
Cython/Compiler/PyrexTypes.py
+3
-0
tests/errors/e_cython_parallel.pyx
tests/errors/e_cython_parallel.pyx
+5
-0
tests/run/memslice.pyx
tests/run/memslice.pyx
+34
-3
No files found.
Cython/Compiler/Nodes.py
View file @
dca00ef2
...
@@ -6174,9 +6174,9 @@ class ParallelStatNode(StatNode, ParallelNode):
...
@@ -6174,9 +6174,9 @@ class ParallelStatNode(StatNode, ParallelNode):
# By default all variables should have the same values as if
# By default all variables should have the same values as if
# executed sequentially
# executed sequentially
lastprivate
=
True
lastprivate
=
True
self
.
propagate_var_privatization
(
entry
,
op
,
lastprivate
)
self
.
propagate_var_privatization
(
entry
,
pos
,
op
,
lastprivate
)
def
propagate_var_privatization
(
self
,
entry
,
op
,
lastprivate
):
def
propagate_var_privatization
(
self
,
entry
,
pos
,
op
,
lastprivate
):
"""
"""
Propagate the sharing attributes of a variable. If the privatization is
Propagate the sharing attributes of a variable. If the privatization is
determined by a parent scope, done propagate further.
determined by a parent scope, done propagate further.
...
@@ -6230,6 +6230,11 @@ class ParallelStatNode(StatNode, ParallelNode):
...
@@ -6230,6 +6230,11 @@ class ParallelStatNode(StatNode, ParallelNode):
# sum and j are undefined here
# sum and j are undefined here
"""
"""
self
.
privates
[
entry
]
=
(
op
,
lastprivate
)
self
.
privates
[
entry
]
=
(
op
,
lastprivate
)
if
entry
.
type
.
is_memoryviewslice
:
error
(
pos
,
"Memoryview slices can only be shared in parallel sections"
)
return
if
self
.
is_prange
:
if
self
.
is_prange
:
if
not
self
.
is_parallel
and
entry
not
in
self
.
parent
.
assignments
:
if
not
self
.
is_parallel
and
entry
not
in
self
.
parent
.
assignments
:
# Parent is a parallel with block
# Parent is a parallel with block
...
@@ -6240,7 +6245,7 @@ class ParallelStatNode(StatNode, ParallelNode):
...
@@ -6240,7 +6245,7 @@ class ParallelStatNode(StatNode, ParallelNode):
# We don't need to propagate privates, only reductions and
# We don't need to propagate privates, only reductions and
# lastprivates
# lastprivates
if
parent
and
(
op
or
lastprivate
):
if
parent
and
(
op
or
lastprivate
):
parent
.
propagate_var_privatization
(
entry
,
op
,
lastprivate
)
parent
.
propagate_var_privatization
(
entry
,
pos
,
op
,
lastprivate
)
def
_allocate_closure_temp
(
self
,
code
,
entry
):
def
_allocate_closure_temp
(
self
,
code
,
entry
):
"""
"""
...
...
Cython/Compiler/ParseTreeTransforms.py
View file @
dca00ef2
...
@@ -1037,7 +1037,8 @@ class ParallelRangeTransform(CythonTransform, SkipDeclarations):
...
@@ -1037,7 +1037,8 @@ class ParallelRangeTransform(CythonTransform, SkipDeclarations):
directive
=
directive
.
rstrip
(
'.'
)
directive
=
directive
.
rstrip
(
'.'
)
cls
=
self
.
directive_to_node
.
get
(
directive
)
cls
=
self
.
directive_to_node
.
get
(
directive
)
if
cls
is
None
:
if
cls
is
None
and
not
(
self
.
namenode_is_cython_module
and
self
.
parallel_directive
[
0
]
!=
'parallel'
):
error
(
node
.
pos
,
"Invalid directive: %s"
%
directive
)
error
(
node
.
pos
,
"Invalid directive: %s"
%
directive
)
self
.
namenode_is_cython_module
=
False
self
.
namenode_is_cython_module
=
False
...
...
Cython/Compiler/PyrexTypes.py
View file @
dca00ef2
...
@@ -515,6 +515,9 @@ class MemoryViewSliceType(PyrexType):
...
@@ -515,6 +515,9 @@ class MemoryViewSliceType(PyrexType):
def
specialization_suffix
(
self
):
def
specialization_suffix
(
self
):
return
"%s_%s"
%
(
self
.
axes_to_name
(),
self
.
dtype_name
)
return
"%s_%s"
%
(
self
.
axes_to_name
(),
self
.
dtype_name
)
def
can_coerce_to_pyobject
(
self
,
env
):
return
True
#def global_init_code(self, entry, code):
#def global_init_code(self, entry, code):
# code.putln("%s.data = NULL;" % entry.cname)
# code.putln("%s.data = NULL;" % entry.cname)
# code.putln("%s.memview = NULL;" % entry.cname)
# code.putln("%s.memview = NULL;" % entry.cname)
...
...
tests/errors/e_cython_parallel.pyx
View file @
dca00ef2
...
@@ -126,6 +126,10 @@ with nogil, parallel.parallel():
...
@@ -126,6 +126,10 @@ with nogil, parallel.parallel():
for
i
in
parallel
.
prange
(
10
):
for
i
in
parallel
.
prange
(
10
):
pass
pass
cdef
int
[:]
dst
,
src
=
object
()
for
i
in
prange
(
10
,
nogil
=
True
):
dst
=
src
_ERRORS
=
u"""
_ERRORS
=
u"""
e_cython_parallel.pyx:3:8: cython.parallel.parallel is not a module
e_cython_parallel.pyx:3:8: cython.parallel.parallel is not a module
e_cython_parallel.pyx:4:0: No such directive: cython.parallel.something
e_cython_parallel.pyx:4:0: No such directive: cython.parallel.something
...
@@ -156,4 +160,5 @@ e_cython_parallel.pyx:110:7: local variable 'i' referenced before assignment
...
@@ -156,4 +160,5 @@ e_cython_parallel.pyx:110:7: local variable 'i' referenced before assignment
e_cython_parallel.pyx:119:17: Cannot read reduction variable in loop body
e_cython_parallel.pyx:119:17: Cannot read reduction variable in loop body
e_cython_parallel.pyx:121:20: stop argument must be numeric
e_cython_parallel.pyx:121:20: stop argument must be numeric
e_cython_parallel.pyx:121:19: prange() can only be used without the GIL
e_cython_parallel.pyx:121:19: prange() can only be used without the GIL
e_cython_parallel.pyx:131:8: Memoryview slices can only be shared in parallel sections
"""
"""
tests/run/memslice.pyx
View file @
dca00ef2
...
@@ -6,6 +6,9 @@ from __future__ import unicode_literals
...
@@ -6,6 +6,9 @@ from __future__ import unicode_literals
cimport
cython
cimport
cython
from
cython
cimport
view
from
cython
cimport
view
from
cython.parallel
cimport
prange
print
cython
.
array
import
sys
import
sys
import
re
import
re
...
@@ -1366,8 +1369,7 @@ def test_nogil_oob1():
...
@@ -1366,8 +1369,7 @@ def test_nogil_oob1():
print
e
.
args
[
0
]
print
e
.
args
[
0
]
try
:
try
:
# Enable when the nogil exception propagation fix is merged
with
nogil
:
#with nogil:
nogil_oob
(
a
)
nogil_oob
(
a
)
except
IndexError
,
e
:
except
IndexError
,
e
:
print
e
.
args
[
0
]
print
e
.
args
[
0
]
...
@@ -1426,3 +1428,32 @@ def test_convert_slicenode_to_indexnode():
...
@@ -1426,3 +1428,32 @@ def test_convert_slicenode_to_indexnode():
a
=
a
[
2
:
4
]
a
=
a
[
2
:
4
]
print
a
[
0
]
print
a
[
0
]
@
testcase
@
cython
.
boundscheck
(
False
)
@
cython
.
wraparound
(
False
)
def
test_memslice_prange
(
arg
):
"""
>>> test_memslice_prange(IntMockBuffer("A", range(400), shape=(20, 4, 5)))
acquired A
released A
>>> test_memslice_prange(IntMockBuffer("A", range(200), shape=(100, 2, 1)))
acquired A
released A
"""
cdef
int
[:,
:,
:]
src
,
dst
src
=
arg
dst
=
cython
.
array
((
<
object
>
src
).
shape
,
sizeof
(
int
),
format
=
"i"
)
cdef
int
i
,
j
,
k
for
i
in
prange
(
src
.
shape
[
0
],
nogil
=
True
):
for
j
in
range
(
src
.
shape
[
1
]):
for
k
in
range
(
src
.
shape
[
2
]):
dst
[
i
,
j
,
k
]
=
src
[
i
,
j
,
k
]
for
i
in
range
(
src
.
shape
[
0
]):
for
j
in
range
(
src
.
shape
[
1
]):
for
k
in
range
(
src
.
shape
[
2
]):
assert
src
[
i
,
j
,
k
]
==
dst
[
i
,
j
,
k
],
(
src
[
i
,
j
,
k
]
==
dst
[
i
,
j
,
k
])
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