Bump protocol version and upgrade storages automatically

TODO

@@ -58,8 +58,6 @@
       committed by future transactions.
     - Add a 'devid' storage configuration so that master do not distribute
       replicated partitions on storages with same 'devid'.
-    - Make tpc_finish safer as described in its __doc__: moving work to
-      tpc_vote and recover from master failure when possible.
 
     Storage
     - Use libmysqld instead of a stand-alone MySQL server.
@@ -143,9 +141,7 @@
     Admin
     - Make admin node able to monitor multiple clusters simultaneously
     - Send notifications (ie: mail) when a storage or master node is lost
-    - Add ctl command to truncate DB at arbitrary TID. 'Truncate' message
-      can be reused. There should also be a way to list last transactions,
-      like fstail for FileStorage.
+    - Add ctl command to list last transactions, like fstail for FileStorage.
 
     Tests
     - Use another mock library: Python 3.3+ has unittest.mock, which is

neo/admin/handler.py

@@ -65,10 +65,12 @@ class AdminEventHandler(EventHandler):
     askLastIDs = forward_ask(Packets.AskLastIDs)
     askLastTransaction = forward_ask(Packets.AskLastTransaction)
     addPendingNodes = forward_ask(Packets.AddPendingNodes)
+    askRecovery = forward_ask(Packets.AskRecovery)
     tweakPartitionTable = forward_ask(Packets.TweakPartitionTable)
     setClusterState = forward_ask(Packets.SetClusterState)
     setNodeState = forward_ask(Packets.SetNodeState)
     checkReplicas = forward_ask(Packets.CheckReplicas)
+    truncate = forward_ask(Packets.Truncate)
 
 
 class MasterEventHandler(EventHandler):

neo/client/app.py

@@ -612,18 +612,29 @@ class Application(ThreadedApplication):
         packet = Packets.AskStoreTransaction(ttid, str(transaction.user),
             str(transaction.description), dumps(transaction._extension),
             txn_context['cache_dict'])
-        add_involved_nodes = txn_context['involved_nodes'].add
+        queue = txn_context['queue']
+        trans_nodes = []
         for node, conn in self.cp.iterateForObject(ttid):
             logging.debug("voting transaction %s on %s", dump(ttid),
                 dump(conn.getUUID()))
             try:
-                self._askStorage(conn, packet)
+                conn.ask(packet, queue=queue)
             except ConnectionClosed:
                 continue
-            add_involved_nodes(node)
-
+            trans_nodes.append(node)
         # check at least one storage node accepted
-        if txn_context['involved_nodes']:
+        if trans_nodes:
+            involved_nodes = txn_context['involved_nodes']
+            packet = Packets.AskVoteTransaction(ttid)
+            for node in involved_nodes.difference(trans_nodes):
+                conn = self.cp.getConnForNode(node)
+                if conn is not None:
+                    try:
+                        conn.ask(packet, queue=queue)
+                    except ConnectionClosed:
+                        pass
+            involved_nodes.update(trans_nodes)
+            self.waitResponses(queue)
             txn_context['voted'] = None
             # We must not go further if connection to master was lost since
             # tpc_begin, to lower the probability of failing during tpc_finish.
@@ -667,27 +678,14 @@ class Application(ThreadedApplication):
         fail in tpc_finish. In particular, making a transaction permanent
         should ideally be as simple as switching a bit permanently.
 
-        In NEO, tpc_finish breaks this promise by not ensuring earlier that all
-        data and metadata are written, and it is for example vulnerable to
-        ENOSPC errors. In other words, some work should be moved to tpc_vote.
-
-        TODO: - In tpc_vote, all involved storage nodes must be asked to write
-                all metadata to ttrans/tobj and _commit_. AskStoreTransaction
-                can be extended for this: for nodes that don't store anything
-                in ttrans, it can just contain the ttid. The final tid is not
-                known yet, so ttrans/tobj would contain the ttid.
-              - In tpc_finish, AskLockInformation is still required for read
-                locking, ttrans.tid must be updated with the final value and
-                ttrans _committed_.
-              - The Verification phase would need some change because
-                ttrans/tobj may contain data for which tpc_finish was not
-                called. The ttid is also in trans so a mapping ttid<->tid is
-                always possible and can be forwarded via the master so that all
-                storage are still able to update the tid column with the final
-                value when moving rows from tobj to obj.
-              The resulting cost is:
-              - additional RPCs in tpc_vote
-              - 1 updated row in ttrans + commit
+        In NEO, all the data (with the exception of the tid, simply because
+        it is not known yet) is already flushed on disk at the end on the vote.
+        During tpc_finish, all nodes storing the transaction metadata are asked
+        to commit by saving the new tid and flushing again: for SQL backends,
+        it's just an UPDATE of 1 cell. At last, the metadata is moved to
+        a final place so that the new transaction is readable, but this is
+        something that can always be replayed (during the verification phase)
+        if any failure happens.
 
         TODO: We should recover from master failures when the transaction got
               successfully committed. More precisely, we should not raise:

neo/client/handlers/master.py

@@ -102,11 +102,17 @@ class PrimaryNotificationsHandler(MTEventHandler):
                 if app.master_conn is None:
                     app._cache_lock_acquire()
                     try:
-                        oid_list = app._cache.clear_current()
                         db = app.getDB()
-                        if db is not None:
-                            db.invalidate(app.last_tid and
-                                          add64(app.last_tid, 1), oid_list)
+                        if app.last_tid < ltid:
+                            oid_list = app._cache.clear_current()
+                            db is None or db.invalidate(
+                                app.last_tid and add64(app.last_tid, 1),
+                                oid_list)
+                        else:
+                            # The DB was truncated. It happens so
+                            # rarely that we don't need to optimize.
+                            app._cache.clear()
+                            db is None or db.invalidateCache()
                     finally:
                         app._cache_lock_release()
                 app.last_tid = ltid

neo/client/handlers/storage.py

@@ -112,9 +112,11 @@ class StorageAnswersHandler(AnswerBaseHandler):
 
     answerCheckCurrentSerial = answerStoreObject
 
-    def answerStoreTransaction(self, conn, _):
+    def answerStoreTransaction(self, conn):
         pass
 
+    answerVoteTransaction = answerStoreTransaction
+
     def answerTIDsFrom(self, conn, tid_list):
         logging.debug('Get %u TIDs from %r', len(tid_list), conn)
         self.app.setHandlerData(tid_list)

neo/lib/bootstrap.py

@@ -41,9 +41,6 @@ class BootstrapManager(EventHandler):
         self.num_partitions = None
         self.current = None
 
-    def notifyNodeInformation(self, conn, node_list):
-        pass
-
     def announcePrimary(self, conn):
         # We found the primary master early enough to be notified of election
         # end. Lucky. Anyway, we must carry on with identification request, so

neo/lib/exception.py

@@ -23,7 +23,7 @@ class ElectionFailure(NeoException):
 class PrimaryFailure(NeoException):
     pass
 
-class OperationFailure(NeoException):
+class StoppedOperation(NeoException):
     pass
 
 class DatabaseFailure(NeoException):

neo/lib/protocol.py

@@ -20,7 +20,7 @@ import traceback
 from cStringIO import StringIO
 from struct import Struct
 
-PROTOCOL_VERSION = 4
+PROTOCOL_VERSION = 5
 
 # Size restrictions.
 MIN_PACKET_SIZE = 10
@@ -722,16 +722,24 @@ class ReelectPrimary(Packet):
     Force a re-election of a primary master node. M -> M.
     """
 
+class Recovery(Packet):
+    """
+    Ask all data needed by master to recover. PM -> S, S -> PM.
+    """
+    _answer = PStruct('answer_recovery',
+        PPTID('ptid'),
+        PTID('backup_tid'),
+        PTID('truncate_tid'),
+    )
+
 class LastIDs(Packet):
     """
-    Ask the last OID, the last TID and the last Partition Table ID so that
-    a master recover. PM -> S, S -> PM.
+    Ask the last OID/TID so that a master can initialize its TransactionManager.
+    PM -> S, S -> PM.
     """
     _answer = PStruct('answer_last_ids',
         POID('last_oid'),
         PTID('last_tid'),
-        PPTID('last_ptid'),
-        PTID('backup_tid'),
     )
 
 class PartitionTable(Packet):
@@ -775,6 +783,8 @@ class StartOperation(Packet):
     this message, it must not serve client nodes. PM -> S.
     """
     _fmt = PStruct('start_operation',
+        # XXX: Is this boolean needed ? Maybe this
+        #      can be deduced from cluster state.
         PBoolean('backup'),
     )
 
@@ -786,8 +796,8 @@ class StopOperation(Packet):
 
 class UnfinishedTransactions(Packet):
     """
-    Ask unfinished transactions  PM -> S.
-    Answer unfinished transactions  S -> PM.
+    Ask unfinished transactions  S -> PM.
+    Answer unfinished transactions  PM -> S.
     """
     _answer = PStruct('answer_unfinished_transactions',
         PTID('max_tid'),
@@ -796,36 +806,36 @@ class UnfinishedTransactions(Packet):
         ),
     )
 
-class ObjectPresent(Packet):
+class LockedTransactions(Packet):
     """
-    Ask if an object is present. If not present, OID_NOT_FOUND should be
-    returned. PM -> S.
-    Answer that an object is present. PM -> S.
+    Ask locked transactions  PM -> S.
+    Answer locked transactions  S -> PM.
     """
-    _fmt = PStruct('object_present',
-        POID('oid'),
-        PTID('tid'),
-    )
-
-    _answer = PStruct('object_present',
-        POID('oid'),
+    _answer = PStruct('answer_locked_transactions',
+        PDict('tid_dict',
+            PTID('ttid'),
             PTID('tid'),
+        ),
     )
 
-class DeleteTransaction(Packet):
+class FinalTID(Packet):
     """
-    Delete a transaction. PM -> S.
+    Return final tid if ttid has been committed. * -> S.
     """
-    _fmt = PStruct('delete_transaction',
+    _fmt = PStruct('final_tid',
+        PTID('ttid'),
+    )
+
+    _answer = PStruct('final_tid',
         PTID('tid'),
-        PFOidList,
     )
 
-class CommitTransaction(Packet):
+class ValidateTransaction(Packet):
     """
     Commit a transaction. PM -> S.
     """
-    _fmt = PStruct('commit_transaction',
+    _fmt = PStruct('validate_transaction',
+        PTID('ttid'),
         PTID('tid'),
     )
 
@@ -878,11 +888,10 @@ class LockInformation(Packet):
     _fmt = PStruct('ask_lock_informations',
         PTID('ttid'),
         PTID('tid'),
-        PFOidList,
     )
 
     _answer = PStruct('answer_information_locked',
-        PTID('tid'),
+        PTID('ttid'),
     )
 
 class InvalidateObjects(Packet):
@@ -899,7 +908,7 @@ class UnlockInformation(Packet):
     Unlock information on a transaction. PM -> S.
     """
     _fmt = PStruct('notify_unlock_information',
-        PTID('tid'),
+        PTID('ttid'),
     )
 
 class GenerateOIDs(Packet):
@@ -961,10 +970,17 @@ class StoreTransaction(Packet):
         PString('extension'),
         PFOidList,
     )
+    _answer = PFEmpty
 
-    _answer = PStruct('answer_store_transaction',
+class VoteTransaction(Packet):
+    """
+    Ask to store a transaction. C -> S.
+    Answer if transaction has been stored. S -> C.
+    """
+    _fmt = PStruct('ask_vote_transaction',
         PTID('tid'),
     )
+    _answer = PFEmpty
 
 class GetObject(Packet):
     """
@@ -1462,13 +1478,14 @@ class ReplicationDone(Packet):
 
 class Truncate(Packet):
     """
-    XXX: Used for both make storage consistent and leave backup mode
-    M -> S
+    Request DB to be truncated. Also used to leave backup mode.
     """
     _fmt = PStruct('truncate',
         PTID('tid'),
     )
 
+    _answer = Error
+
 
 StaticRegistry = {}
 def register(request, ignore_when_closed=None):
@@ -1586,6 +1603,8 @@ class Packets(dict):
                     ReelectPrimary)
     NotifyNodeInformation = register(
                     NotifyNodeInformation)
+    AskRecovery, AnswerRecovery = register(
+                    Recovery)
     AskLastIDs, AnswerLastIDs = register(
                     LastIDs)
     AskPartitionTable, AnswerPartitionTable = register(
@@ -1600,12 +1619,12 @@ class Packets(dict):
                     StopOperation)
     AskUnfinishedTransactions, AnswerUnfinishedTransactions = register(
                     UnfinishedTransactions)
-    AskObjectPresent, AnswerObjectPresent = register(
-                    ObjectPresent)
-    DeleteTransaction = register(
-                    DeleteTransaction)
-    CommitTransaction = register(
-                    CommitTransaction)
+    AskLockedTransactions, AnswerLockedTransactions = register(
+                    LockedTransactions)
+    AskFinalTID, AnswerFinalTID = register(
+                    FinalTID)
+    ValidateTransaction = register(
+                    ValidateTransaction)
     AskBeginTransaction, AnswerBeginTransaction = register(
                     BeginTransaction)
     AskFinishTransaction, AnswerTransactionFinished = register(
@@ -1624,6 +1643,8 @@ class Packets(dict):
                     AbortTransaction)
     AskStoreTransaction, AnswerStoreTransaction = register(
                     StoreTransaction)
+    AskVoteTransaction, AnswerVoteTransaction = register(
+                    VoteTransaction)
     AskObject, AnswerObject = register(
                     GetObject)
     AskTIDs, AnswerTIDs = register(

neo/master/app.py

@@ -24,7 +24,7 @@ from neo.lib.protocol import uuid_str, UUID_NAMESPACES, ZERO_TID
 from neo.lib.protocol import ClusterStates, NodeStates, NodeTypes, Packets
 from neo.lib.handler import EventHandler
 from neo.lib.connection import ListeningConnection, ClientConnection
-from neo.lib.exception import ElectionFailure, PrimaryFailure, OperationFailure
+from neo.lib.exception import ElectionFailure, PrimaryFailure, StoppedOperation
 
 class StateChangedException(Exception): pass
 
@@ -45,6 +45,7 @@ class Application(BaseApplication):
     backup_tid = None
     backup_app = None
     uuid = None
+    truncate_tid = None
 
     def __init__(self, config):
         super(Application, self).__init__(
@@ -77,7 +78,6 @@ class Application(BaseApplication):
         self.primary = None
         self.primary_master_node = None
         self.cluster_state = None
-        self._startup_allowed = False
 
         uuid = config.getUUID()
         if uuid:
@@ -221,7 +221,7 @@ class Application(BaseApplication):
                 self.primary = self.primary is None
                 break
 
-    def broadcastNodesInformation(self, node_list):
+    def broadcastNodesInformation(self, node_list, exclude=None):
         """
           Broadcast changes for a set a nodes
           Send only one packet per connection to reduce bandwidth
@@ -243,7 +243,7 @@ class Application(BaseApplication):
         # send at most one non-empty notification packet per node
         for node in self.nm.getIdentifiedList():
             node_list = node_dict.get(node.getType())
-            if node_list and node.isRunning():
+            if node_list and node.isRunning() and node is not exclude:
                 node.notify(Packets.NotifyNodeInformation(node_list))
 
     def broadcastPartitionChanges(self, cell_list):
@@ -254,7 +254,6 @@ class Application(BaseApplication):
             ptid = self.pt.setNextID()
             packet = Packets.NotifyPartitionChanges(ptid, cell_list)
             for node in self.nm.getIdentifiedList():
-                # TODO: notify masters
                 if node.isRunning() and not node.isMaster():
                     node.notify(packet)
 
@@ -266,8 +265,6 @@ class Application(BaseApplication):
         """
         logging.info('provide service')
         poll = self.em.poll
-        self.tm.reset()
-
         self.changeClusterState(ClusterStates.RUNNING)
 
         # Now everything is passive.
@@ -278,8 +275,13 @@ class Application(BaseApplication):
             if e.args[0] != ClusterStates.STARTING_BACKUP:
                 raise
             self.backup_tid = tid = self.getLastTransaction()
-            self.pt.setBackupTidDict({node.getUUID(): tid
-                for node in self.nm.getStorageList(only_identified=True)})
+            packet = Packets.StartOperation(True)
+            tid_dict = {}
+            for node in self.nm.getStorageList(only_identified=True):
+                tid_dict[node.getUUID()] = tid
+                if node.isRunning():
+                    node.notify(packet)
+            self.pt.setBackupTidDict(tid_dict)
 
     def playPrimaryRole(self):
         logging.info('play the primary role with %r', self.listening_conn)
@@ -323,30 +325,46 @@ class Application(BaseApplication):
                     in_conflict)
                 in_conflict.setUUID(None)
 
-        # recover the cluster status at startup
+        # Do not restart automatically if ElectionFailure is raised, in order
+        # to avoid a split of the database. For example, with 2 machines with
+        # a master and a storage on each one and replicas=1, the secondary
+        # master becomes primary in case of network failure between the 2
+        # machines but must not start automatically: otherwise, each storage
+        # node would diverge.
+        self._startup_allowed = False
         try:
-            self.runManager(RecoveryManager)
             while True:
-                self.runManager(VerificationManager)
+                self.runManager(RecoveryManager)
                 try:
-                    if self.backup_tid:
+                    self.runManager(VerificationManager)
+                    if not self.backup_tid:
+                        self.provideService()
+                        # self.provideService only returns without raising
+                        # when switching to backup mode.
                     if self.backup_app is None:
                         raise RuntimeError("No upstream cluster to backup"
                                            " defined in configuration")
-                        self.backup_app.provideService()
-                        # Reset connection with storages (and go through a
-                        # recovery phase) when leaving backup mode in order
-                        # to get correct last oid/tid.
-                        self.runManager(RecoveryManager)
-                        continue
-                    self.provideService()
-                except OperationFailure:
+                    truncate = Packets.Truncate(
+                        self.backup_app.provideService())
+                except StoppedOperation, e:
                     logging.critical('No longer operational')
+                    truncate = Packets.Truncate(*e.args) if e.args else None
+                    # Automatic restart except if we truncate or retry to.
+                    self._startup_allowed = not (self.truncate_tid or truncate)
+                node_list = []
                 for node in self.nm.getIdentifiedList():
                     if node.isStorage() or node.isClient():
-                        node.notify(Packets.StopOperation())
+                        conn = node.getConnection()
+                        conn.notify(Packets.StopOperation())
                         if node.isClient():
-                            node.getConnection().abort()
+                            conn.abort()
+                            continue
+                        if truncate:
+                            conn.notify(truncate)
+                        if node.isRunning():
+                            node.setPending()
+                            node_list.append(node)
+                self.broadcastNodesInformation(node_list)
         except StateChangedException, e:
             assert e.args[0] == ClusterStates.STOPPING
             self.shutdown()
@@ -427,7 +445,7 @@ class Application(BaseApplication):
                 continue # keep handler
             if type(handler) is not type(conn.getLastHandler()):
                 conn.setHandler(handler)
-                handler.connectionCompleted(conn)
+                handler.connectionCompleted(conn, new=False)
         self.cluster_state = state
 
     def getNewUUID(self, uuid, address, node_type):
@@ -461,7 +479,7 @@ class Application(BaseApplication):
             # wait for all transaction to be finished
             while self.tm.hasPending():
                 self.em.poll(1)
-        except OperationFailure:
+        except StoppedOperation:
             logging.critical('No longer operational')
 
         logging.info("asking remaining nodes to shutdown")

neo/master/backup_app.py

@@ -152,24 +152,20 @@ class BackupApplication(object):
                     assert tid != ZERO_TID
                     logging.warning("Truncating at %s (last_tid was %s)",
                         dump(app.backup_tid), dump(last_tid))
-                # XXX: We want to go through a recovery phase in order to
-                #      initialize the transaction manager, but this is only
-                #      possible if storages already know that we left backup
-                #      mode. To that purpose, we always send a Truncate packet,
-                #      even if there's nothing to truncate.
-                p = Packets.Truncate(tid)
-                for node in app.nm.getStorageList(only_identified=True):
-                    conn = node.getConnection()
-                    conn.setHandler(handler)
-                    node.setState(NodeStates.TEMPORARILY_DOWN)
-                    # Packets will be sent at the beginning of the recovery
-                    # phase.
-                    conn.notify(p)
-                    conn.abort()
+                else:
+                    # We will do a dummy truncation, just to leave backup mode,
+                    # so it's fine to start automatically if there's any
+                    # missing storage.
+                    # XXX: Consider using another method to leave backup mode,
+                    #      at least when there's nothing to truncate. Because
+                    #      in case of StoppedOperation during VERIFYING state,
+                    #      this flag will be wrongly set to False.
+                    app._startup_allowed = True
                 # If any error happened before reaching this line, we'd go back
                 # to backup mode, which is the right mode to recover.
                 del app.backup_tid
-                break
+                # Now back to RECOVERY...
+                return tid
             finally:
                 del self.primary_partition_dict, self.tid_list
                 pt.clearReplicating()

neo/master/handlers/__init__.py

@@ -15,6 +15,7 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 from neo.lib import logging
+from neo.lib.exception import StoppedOperation
 from neo.lib.handler import EventHandler
 from neo.lib.protocol import (uuid_str, NodeTypes, NodeStates, Packets,
     BrokenNodeDisallowedError,
@@ -23,6 +24,10 @@ from neo.lib.protocol import (uuid_str, NodeTypes, NodeStates, Packets,
 class MasterHandler(EventHandler):
     """This class implements a generic part of the event handlers."""
 
+    def connectionCompleted(self, conn, new=None):
+        if new is None:
+            super(MasterHandler, self).connectionCompleted(conn)
+
     def requestIdentification(self, conn, node_type, uuid, address, name):
         self.checkClusterName(name)
         app = self.app
@@ -61,25 +66,31 @@ class MasterHandler(EventHandler):
         state = self.app.getClusterState()
         conn.answer(Packets.AnswerClusterState(state))
 
-    def askLastIDs(self, conn):
+    def askRecovery(self, conn):
         app = self.app
-        conn.answer(Packets.AnswerLastIDs(
-            app.tm.getLastOID(),
-            app.tm.getLastTID(),
+        conn.answer(Packets.AnswerRecovery(
             app.pt.getID(),
-            app.backup_tid))
+            app.backup_tid and app.pt.getBackupTid(),
+            app.truncate_tid))
+
+    def askLastIDs(self, conn):
+        tm = self.app.tm
+        conn.answer(Packets.AnswerLastIDs(tm.getLastOID(), tm.getLastTID()))
 
     def askLastTransaction(self, conn):
         conn.answer(Packets.AnswerLastTransaction(
             self.app.getLastTransaction()))
 
-    def askNodeInformation(self, conn):
+    def _notifyNodeInformation(self, conn):
         nm = self.app.nm
         node_list = []
         node_list.extend(n.asTuple() for n in nm.getMasterList())
         node_list.extend(n.asTuple() for n in nm.getClientList())
         node_list.extend(n.asTuple() for n in nm.getStorageList())
         conn.notify(Packets.NotifyNodeInformation(node_list))
+
+    def askNodeInformation(self, conn):
+        self._notifyNodeInformation(conn)
         conn.answer(Packets.AnswerNodeInformation())
 
     def askPartitionTable(self, conn):
@@ -94,15 +105,18 @@ DISCONNECTED_STATE_DICT = {
 class BaseServiceHandler(MasterHandler):
     """This class deals with events for a service phase."""
 
-    def nodeLost(self, conn, node):
-        # This method provides a hook point overridable by service classes.
-        # It is triggered when a connection to a node gets lost.
-        pass
+    def connectionCompleted(self, conn, new):
+        self._notifyNodeInformation(conn)
+        pt = self.app.pt
+        conn.notify(Packets.SendPartitionTable(pt.getID(), pt.getRowList()))
 
     def connectionLost(self, conn, new_state):
-        node = self.app.nm.getByUUID(conn.getUUID())
+        app = self.app
+        node = app.nm.getByUUID(conn.getUUID())
         if node is None:
             return # for example, when a storage is removed by an admin
+        assert node.isStorage(), node
+        logging.info('storage node lost')
         if new_state != NodeStates.BROKEN:
             new_state = DISCONNECTED_STATE_DICT.get(node.getType(),
                     NodeStates.DOWN)
@@ -117,10 +131,13 @@ class BaseServiceHandler(MasterHandler):
             # was in pending state, so drop it from the node manager to forget
             # it and do not set in running state when it comes back
             logging.info('drop a pending node from the node manager')
-            self.app.nm.remove(node)
-        self.app.broadcastNodesInformation([node])
-        # clean node related data in specialized handlers
-        self.nodeLost(conn, node)
+            app.nm.remove(node)
+        app.broadcastNodesInformation([node])
+        if app.truncate_tid:
+            raise StoppedOperation
+        app.broadcastPartitionChanges(app.pt.outdate(node))
+        if not app.pt.operational():
+            raise StoppedOperation
 
     def notifyReady(self, conn):
         self.app.setStorageReady(conn.getUUID())

neo/master/handlers/administration.py

@@ -19,6 +19,7 @@ import random
 from . import MasterHandler
 from ..app import StateChangedException
 from neo.lib import logging
+from neo.lib.exception import StoppedOperation
 from neo.lib.pt import PartitionTableException
 from neo.lib.protocol import ClusterStates, Errors, \
     NodeStates, NodeTypes, Packets, ProtocolError, uuid_str
@@ -159,6 +160,13 @@ class AdministrationHandler(MasterHandler):
             map(app.nm.getByUUID, uuid_list)))
         conn.answer(Errors.Ack(''))
 
+    def truncate(self, conn, tid):
+        app = self.app
+        if app.cluster_state != ClusterStates.RUNNING:
+            raise ProtocolError('Can not truncate in this state')
+        conn.answer(Errors.Ack(''))
+        raise StoppedOperation(tid)
+
     def checkReplicas(self, conn, partition_dict, min_tid, max_tid):
         app = self.app
         pt = app.pt

neo/master/handlers/client.py

@@ -20,9 +20,6 @@ from . import MasterHandler
 class ClientServiceHandler(MasterHandler):
     """ Handler dedicated to client during service state """
 
-    def connectionCompleted(self, conn):
-        pass
-
     def connectionLost(self, conn, new_state):
         # cancel its transactions and forgot the node
         app = self.app
@@ -59,9 +56,10 @@ class ClientServiceHandler(MasterHandler):
         pt = app.pt
 
         # Collect partitions related to this transaction.
-        lock_oid_list = oid_list + checked_list
-        partition_set = set(map(pt.getPartition, lock_oid_list))
-        partition_set.add(pt.getPartition(ttid))
+        getPartition = pt.getPartition
+        partition_set = set(map(getPartition, oid_list))
+        partition_set.update(map(getPartition, checked_list))
+        partition_set.add(getPartition(ttid))
 
         # Collect the UUIDs of nodes related to this transaction.
         uuid_list = filter(app.isStorageReady, {cell.getUUID()
@@ -85,7 +83,6 @@ class ClientServiceHandler(MasterHandler):
                 {x.getUUID() for x in identified_node_list},
                 conn.getPeerId(),
             ),
-            lock_oid_list,
         )
         for node in identified_node_list:
             node.ask(p, timeout=60)

neo/master/handlers/identification.py

@@ -26,7 +26,7 @@ class IdentificationHandler(MasterHandler):
             **kw)
         handler = conn.getHandler()
         assert not isinstance(handler, IdentificationHandler), handler
-        handler.connectionCompleted(conn)
+        handler.connectionCompleted(conn, True)
 
     def _setupNode(self, conn, node_type, uuid, address, node):
         app = self.app
@@ -72,7 +72,7 @@ class IdentificationHandler(MasterHandler):
         node.setState(state)
         node.setConnection(conn)
         conn.setHandler(handler)
-        app.broadcastNodesInformation([node])
+        app.broadcastNodesInformation([node], node)
         return uuid
 
 class SecondaryIdentificationHandler(MasterHandler):

neo/master/handlers/storage.py

@@ -16,7 +16,7 @@
 
 from neo.lib import logging
 from neo.lib.protocol import CellStates, ClusterStates, Packets, ProtocolError
-from neo.lib.exception import OperationFailure
+from neo.lib.exception import StoppedOperation
 from neo.lib.pt import PartitionTableException
 from . import BaseServiceHandler
 
@@ -24,25 +24,27 @@ from . import BaseServiceHandler
 class StorageServiceHandler(BaseServiceHandler):
     """ Handler dedicated to storages during service state """
 
-    def connectionCompleted(self, conn):
-        # TODO: unit test
+    def connectionCompleted(self, conn, new):
         app = self.app
         uuid = conn.getUUID()
         node = app.nm.getByUUID(uuid)
         app.setStorageNotReady(uuid)
+        if new:
+            super(StorageServiceHandler, self).connectionCompleted(conn, new)
         # XXX: what other values could happen ?
         if node.isRunning():
             conn.notify(Packets.StartOperation(bool(app.backup_tid)))
 
-    def nodeLost(self, conn, node):
-        logging.info('storage node lost')
-        assert not node.isRunning(), node.getState()
+    def connectionLost(self, conn, new_state):
         app = self.app
-        app.broadcastPartitionChanges(app.pt.outdate(node))
-        if not app.pt.operational():
-            raise OperationFailure, 'cannot continue operation'
+        node = app.nm.getByUUID(conn.getUUID())
+        super(StorageServiceHandler, self).connectionLost(conn, new_state)
         app.tm.forget(conn.getUUID())
-        if app.getClusterState() == ClusterStates.BACKINGUP:
+        if (app.getClusterState() == ClusterStates.BACKINGUP
+            # Also check if we're exiting, because backup_app is not usable
+            # in this case. Maybe cluster state should be set to something
+            # else, like STOPPING, during cleanup (__del__/close).
+            and app.listening_conn):
             app.backup_app.nodeLost(node)
         if app.packing is not None:
             self.answerPack(conn, False)
@@ -74,7 +76,7 @@ class StorageServiceHandler(BaseServiceHandler):
                                     CellStates.CORRUPTED))
         self.app.broadcastPartitionChanges(change_list)
         if not self.app.pt.operational():
-            raise OperationFailure('cannot continue operation')
+            raise StoppedOperation
 
     def notifyReplicationDone(self, conn, offset, tid):
         app = self.app

neo/master/pt.py

@@ -299,15 +299,19 @@ class PartitionTable(neo.lib.pt.PartitionTable):
                     yield offset, cell
                     break
 
-    def getReadableCellNodeSet(self):
+    def getOperationalNodeSet(self):
         """
         Return a set of all nodes which are part of at least one UP TO DATE
-        partition.
+        partition. An empty list is returned if these nodes aren't enough to
+        become operational.
         """
-        return {cell.getNode()
-            for row in self.partition_list
-            for cell in row
-            if cell.isReadable()}
+        node_set = set()
+        for row in self.partition_list:
+            if not any(cell.isReadable() and cell.getNode().isPending()
+                       for cell in row):
+                return () # not operational
+            node_set.update(cell.getNode() for cell in row if cell.isReadable())
+        return node_set
 
     def clearReplicating(self):
         for row in self.partition_list:

neo/master/recovery.py

@@ -15,9 +15,7 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 from neo.lib import logging
-from neo.lib.util import dump
 from neo.lib.protocol import Packets, ProtocolError, ClusterStates, NodeStates
-from neo.lib.protocol import ZERO_OID
 from .handlers import MasterHandler
 
 
@@ -29,7 +27,9 @@ class RecoveryManager(MasterHandler):
     def __init__(self, app):
         # The target node's uuid to request next.
         self.target_ptid = None
+        self.ask_pt = []
         self.backup_tid_dict = {}
+        self.truncate_dict = {}
 
     def getHandler(self):
         return self
@@ -51,7 +51,7 @@ class RecoveryManager(MasterHandler):
         app = self.app
         pt = app.pt
         app.changeClusterState(ClusterStates.RECOVERING)
-        pt.setID(None)
+        pt.clear()
 
         # collect the last partition table available
         poll = app.em.poll
@@ -60,10 +60,14 @@ class RecoveryManager(MasterHandler):
             if pt.filled():
                 # A partition table exists, we are starting an existing
                 # cluster.
-                node_list = pt.getReadableCellNodeSet()
+                node_list = pt.getOperationalNodeSet()
                 if app._startup_allowed:
                     node_list = [node for node in node_list if node.isPending()]
-                elif not all(node.isPending() for node in node_list):
+                elif node_list:
+                    # we want all nodes to be there if we're going to truncate
+                    if app.truncate_tid:
+                        node_list = pt.getNodeSet()
+                    if not all(node.isPending() for node in node_list):
                         continue
             elif app._startup_allowed or app.autostart:
                 # No partition table and admin allowed startup, we are
@@ -76,6 +80,17 @@ class RecoveryManager(MasterHandler):
             if node_list and not any(node.getConnection().isPending()
                                      for node in node_list):
                 if pt.filled():
+                    if app.truncate_tid:
+                        node_list = app.nm.getIdentifiedList(pool_set={uuid
+                            for uuid, tid in self.truncate_dict.iteritems()
+                            if not tid or app.truncate_tid < tid})
+                        if node_list:
+                            truncate = Packets.Truncate(app.truncate_tid)
+                            for node in node_list:
+                                conn = node.getConnection()
+                                conn.notify(truncate)
+                                self.connectionCompleted(conn, False)
+                            continue
                     node_list = pt.getConnectedNodeList()
                 break
 
@@ -88,64 +103,81 @@ class RecoveryManager(MasterHandler):
 
         if pt.getID() is None:
             logging.info('creating a new partition table')
-            # reset IDs generators & build new partition with running nodes
-            app.tm.setLastOID(ZERO_OID)
             pt.make(node_list)
-            self._broadcastPartitionTable(pt.getID(), pt.getRowList())
-        elif app.backup_tid:
+            self._notifyAdmins(Packets.SendPartitionTable(
+                pt.getID(), pt.getRowList()))
+        else:
+            cell_list = pt.outdate()
+            if cell_list:
+                self._notifyAdmins(Packets.NotifyPartitionChanges(
+                    pt.setNextID(), cell_list))
+            if app.backup_tid:
                 pt.setBackupTidDict(self.backup_tid_dict)
                 app.backup_tid = pt.getBackupTid()
 
-        app.setLastTransaction(app.tm.getLastTID())
-        logging.debug('cluster starts with loid=%s and this partition table :',
-                      dump(app.tm.getLastOID()))
+        logging.debug('cluster starts this partition table:')
         pt.log()
 
     def connectionLost(self, conn, new_state):
-        node = self.app.nm.getByUUID(conn.getUUID())
-        assert node is not None
+        uuid = conn.getUUID()
+        self.backup_tid_dict.pop(uuid, None)
+        self.truncate_dict.pop(uuid, None)
+        node = self.app.nm.getByUUID(uuid)
+        try:
+            i = self.ask_pt.index(uuid)
+        except ValueError:
+            pass
+        else:
+            del self.ask_pt[i]
+            if not i:
+                if self.ask_pt:
+                    self.app.nm.getByUUID(self.ask_pt[0]) \
+                        .ask(Packets.AskPartitionTable())
+                else:
+                    logging.warning("Waiting for %r to come back."
+                        " No other node has version %s of the partition table.",
+                        node, self.target_ptid)
         if node.getState() == new_state:
             return
         node.setState(new_state)
         # broadcast to all so that admin nodes gets informed
         self.app.broadcastNodesInformation([node])
 
-    def connectionCompleted(self, conn):
+    def connectionCompleted(self, conn, new):
         # ask the last IDs to perform the recovery
-        conn.ask(Packets.AskLastIDs())
-
-    def answerLastIDs(self, conn, loid, ltid, lptid, backup_tid):
-        # Get max values.
-        if loid is not None:
-            self.app.tm.setLastOID(loid)
-        if ltid is not None:
-            self.app.tm.setLastTID(ltid)
-        if lptid > self.target_ptid:
-            # something newer
-            self.target_ptid = lptid
+        conn.ask(Packets.AskRecovery())
+
+    def answerRecovery(self, conn, ptid, backup_tid, truncate_tid):
+        uuid = conn.getUUID()
+        if self.target_ptid <= ptid:
+            # Maybe a newer partition table.
+            if self.target_ptid == ptid and self.ask_pt:
+                # Another node is already asked.
+                self.ask_pt.append(uuid)
+            elif self.target_ptid < ptid or self.ask_pt is not ():
+                # No node asked yet for the newest partition table.
+                self.target_ptid = ptid
+                self.ask_pt = [uuid]
                 conn.ask(Packets.AskPartitionTable())
-        self.backup_tid_dict[conn.getUUID()] = backup_tid
+        self.backup_tid_dict[uuid] = backup_tid
+        self.truncate_dict[uuid] = truncate_tid
 
     def answerPartitionTable(self, conn, ptid, row_list):
-        if ptid != self.target_ptid:
         # If this is not from a target node, ignore it.
-            logging.warn('Got %s while waiting %s', dump(ptid),
-                    dump(self.target_ptid))
-        else:
-            self._broadcastPartitionTable(ptid, row_list)
-            self.app.backup_tid = self.backup_tid_dict[conn.getUUID()]
-
-    def _broadcastPartitionTable(self, ptid, row_list):
+        if ptid == self.target_ptid:
+            app = self.app
             try:
-            new_nodes = self.app.pt.load(ptid, row_list, self.app.nm)
+                new_nodes = app.pt.load(ptid, row_list, app.nm)
             except IndexError:
                 raise ProtocolError('Invalid offset')
-        else:
-            notification = Packets.NotifyNodeInformation(new_nodes)
-            ptid = self.app.pt.getID()
-            row_list = self.app.pt.getRowList()
-            partition_table = Packets.SendPartitionTable(ptid, row_list)
-            # notify the admin nodes
+            self._notifyAdmins(Packets.NotifyNodeInformation(new_nodes),
+                               Packets.SendPartitionTable(ptid, row_list))
+            self.ask_pt = ()
+            uuid = conn.getUUID()
+            app.backup_tid = self.backup_tid_dict[uuid]
+            app.truncate_tid = self.truncate_dict[uuid]
+
+    def _notifyAdmins(self, *packets):
         for node in self.app.nm.getAdminList(only_identified=True):
-                node.notify(notification)
-                node.notify(partition_table)
+            for packet in packets:
+                node.notify(packet)

neo/master/transactions.py

@@ -17,7 +17,7 @@
 from time import time
 from struct import pack, unpack
 from neo.lib import logging
-from neo.lib.protocol import ProtocolError, uuid_str, ZERO_TID
+from neo.lib.protocol import ProtocolError, uuid_str, ZERO_OID, ZERO_TID
 from neo.lib.util import dump, u64, addTID, tidFromTime
 
 class DelayedError(Exception):
@@ -155,15 +155,18 @@ class TransactionManager(object):
     """
         Manage current transactions
     """
-    _last_tid = ZERO_TID
 
     def __init__(self, on_commit):
+        self._on_commit = on_commit
+        self.reset()
+
+    def reset(self):
         # ttid -> transaction
         self._ttid_dict = {}
         # node -> transactions mapping
         self._node_dict = {}
-        self._last_oid = None
-        self._on_commit = on_commit
+        self._last_oid = ZERO_OID
+        self._last_tid = ZERO_TID
         # queue filled with ttids pointing to transactions with increasing tids
         self._queue = []
 
@@ -182,8 +185,6 @@ class TransactionManager(object):
 
     def getNextOIDList(self, num_oids):
         """ Generate a new OID list """
-        if self._last_oid is None:
-            raise RuntimeError, 'I do not know the last OID'
         oid = unpack('!Q', self._last_oid)[0] + 1
         oid_list = [pack('!Q', oid + i) for i in xrange(num_oids)]
         self._last_oid = oid_list[-1]
@@ -249,14 +250,6 @@ class TransactionManager(object):
         if self._last_tid < tid:
             self._last_tid = tid
 
-    def reset(self):
-        """
-            Discard all manager content
-            This doesn't reset the last TID.
-        """
-        self._ttid_dict = {}
-        self._node_dict = {}
-
     def hasPending(self):
         """
             Returns True if some transactions are pending
@@ -359,7 +352,12 @@ class TransactionManager(object):
             self._unlockPending()
 
     def _unlockPending(self):
-        # unlock pending transactions
+        """Serialize transaction unlocks
+
+        This should rarely delay unlocks since the time needed to lock a
+        transaction is roughly constant. The most common case where reordering
+        is required is when some storages are already busy by other tasks.
+        """
         queue = self._queue
         pop = queue.pop
         insert = queue.insert

neo/master/verification.py

@@ -14,48 +14,29 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
+from collections import defaultdict
 from neo.lib import logging
 from neo.lib.util import dump
 from neo.lib.protocol import ClusterStates, Packets, NodeStates
 from .handlers import BaseServiceHandler
 
 
-class VerificationFailure(Exception):
-    """
-        Exception raised each time the cluster integrity failed.
-          - An required storage node is missing
-          - A transaction or an object is missing on a node
-    """
-    pass
-
-
 class VerificationManager(BaseServiceHandler):
-    """
-      Manager for verification step of a NEO cluster:
-        - Wait for at least one available storage per partition
-        - Check if all expected content is present
-    """
 
     def __init__(self, app):
-        self._oid_set = set()
-        self._tid_set = set()
+        self._locked_dict = {}
+        self._voted_dict = defaultdict(set)
         self._uuid_set = set()
-        self._object_present = False
 
     def _askStorageNodesAndWait(self, packet, node_list):
         poll = self.app.em.poll
-        operational = self.app.pt.operational
         uuid_set = self._uuid_set
         uuid_set.clear()
         for node in node_list:
             uuid_set.add(node.getUUID())
             node.ask(packet)
-        while True:
+        while uuid_set:
             poll(1)
-            if not operational():
-                raise VerificationFailure
-            if not uuid_set:
-                break
 
     def getHandler(self):
         return self
@@ -76,135 +57,80 @@ class VerificationManager(BaseServiceHandler):
         return state, self
 
     def run(self):
-        self.app.changeClusterState(ClusterStates.VERIFYING)
-        while True:
-            try:
+        app = self.app
+        app.changeClusterState(ClusterStates.VERIFYING)
+        app.tm.reset()
+        if not app.backup_tid:
             self.verifyData()
-            except VerificationFailure:
-                continue
-            break
-        # At this stage, all non-working nodes are out-of-date.
-        self.app.broadcastPartitionChanges(self.app.pt.outdate())
+        # This is where storages truncate if requested:
+        # - we make sure all nodes are running with a truncate_tid value saved
+        # - there's no unfinished data
+        # - just before they return the last tid/oid
+        self._askStorageNodesAndWait(Packets.AskLastIDs(),
+            [x for x in app.nm.getIdentifiedList() if x.isStorage()])
+        app.setLastTransaction(app.tm.getLastTID())
+        # Just to not return meaningless information in AnswerRecovery.
+        app.truncate_tid = None
 
     def verifyData(self):
-        """Verify the data in storage nodes and clean them up, if necessary."""
         app = self.app
-
-        # wait for any missing node
-        logging.debug('waiting for the cluster to be operational')
-        while not app.pt.operational():
-            app.em.poll(1)
-        if app.backup_tid:
-            return
-
         logging.info('start to verify data')
         getIdentifiedList = app.nm.getIdentifiedList
 
-        # Gather all unfinished transactions.
-        self._askStorageNodesAndWait(Packets.AskUnfinishedTransactions(),
+        # Gather all transactions that may have been partially finished.
+        self._askStorageNodesAndWait(Packets.AskLockedTransactions(),
             [x for x in getIdentifiedList() if x.isStorage()])
 
-        # Gather OIDs for each unfinished TID, and verify whether the
-        # transaction can be finished or must be aborted. This could be
-        # in parallel in theory, but not so easy. Thus do it one-by-one
-        # at the moment.
-        for tid in self._tid_set:
-            uuid_set = self.verifyTransaction(tid)
-            if uuid_set is None:
-                packet = Packets.DeleteTransaction(tid, self._oid_set or [])
-                # Make sure that no node has this transaction.
-                for node in getIdentifiedList():
-                    if node.isStorage():
-                        node.notify(packet)
+        # Some nodes may have already unlocked these transactions and
+        # _locked_dict is incomplete, but we can ask them the final tid.
+        for ttid, voted_set in self._voted_dict.iteritems():
+            if ttid in self._locked_dict:
+                continue
+            partition = app.pt.getPartition(ttid)
+            for node in getIdentifiedList(pool_set={cell.getUUID()
+                    # If an outdated cell had unlocked ttid, then either
+                    # it is already in _locked_dict or a readable cell also
+                    # unlocked it.
+                    for cell in app.pt.getCellList(partition, readable=True)
+                    } - voted_set):
+                self._askStorageNodesAndWait(Packets.AskFinalTID(ttid), (node,))
+                if self._tid is not None:
+                    self._locked_dict[ttid] = self._tid
+                    break
             else:
-                if app.getLastTransaction() < tid: # XXX: refactoring needed
-                    app.setLastTransaction(tid)
-                    app.tm.setLastTID(tid)
-                packet = Packets.CommitTransaction(tid)
+                # Transaction not locked. No need to tell nodes to delete it,
+                # since they drop any unfinished data just before being
+                # operational.
+                pass
+
+        # Finish all transactions for which we know that tpc_finish was called
+        # but not fully processed. This may include replicas with transactions
+        # that were not even locked.
+        for ttid, tid in self._locked_dict.iteritems():
+            uuid_set = self._voted_dict.get(ttid)
+            if uuid_set:
+                packet = Packets.ValidateTransaction(ttid, tid)
                 for node in getIdentifiedList(pool_set=uuid_set):
                     node.notify(packet)
-            self._oid_set = set()
-            # If possible, send the packets now.
-            app.em.poll(0)
-
-    def verifyTransaction(self, tid):
-        nm = self.app.nm
-        uuid_set = set()
-
-        # Determine to which nodes I should ask.
-        partition = self.app.pt.getPartition(tid)
-        uuid_list = [cell.getUUID() for cell \
-                in self.app.pt.getCellList(partition, readable=True)]
-        if len(uuid_list) == 0:
-            raise VerificationFailure
-        uuid_set.update(uuid_list)
-
-        # Gather OIDs.
-        node_list = self.app.nm.getIdentifiedList(pool_set=uuid_list)
-        if len(node_list) == 0:
-            raise VerificationFailure
-        self._askStorageNodesAndWait(Packets.AskTransactionInformation(tid),
-            node_list)
-
-        if self._oid_set is None or len(self._oid_set) == 0:
-            # Not commitable.
-            return None
-        # Verify that all objects are present.
-        for oid in self._oid_set:
-            partition = self.app.pt.getPartition(oid)
-            object_uuid_list = [cell.getUUID() for cell \
-                        in self.app.pt.getCellList(partition, readable=True)]
-            if len(object_uuid_list) == 0:
-                raise VerificationFailure
-            uuid_set.update(object_uuid_list)
-
-            self._object_present = True
-            self._askStorageNodesAndWait(Packets.AskObjectPresent(oid, tid),
-                nm.getIdentifiedList(pool_set=object_uuid_list))
-            if not self._object_present:
-                # Not commitable.
-                return None
-
-        return uuid_set
-
-    def answerUnfinishedTransactions(self, conn, max_tid, tid_list):
-        logging.info('got unfinished transactions %s from %r',
-                     map(dump, tid_list), conn)
-        self._uuid_set.remove(conn.getUUID())
-        self._tid_set.update(tid_list)
 
-    def answerTransactionInformation(self, conn, tid,
-                                           user, desc, ext, packed, oid_list):
+    def answerLastIDs(self, conn, loid, ltid):
         self._uuid_set.remove(conn.getUUID())
-        oid_set = set(oid_list)
-        if self._oid_set is None:
-            # Someone does not agree.
-            pass
-        elif len(self._oid_set) == 0:
-            # This is the first answer.
-            self._oid_set.update(oid_set)
-        elif self._oid_set != oid_set:
-            raise ValueError, "Inconsistent transaction %s" % \
-                (dump(tid, ))
-
-    def tidNotFound(self, conn, message):
-        logging.info('TID not found: %s', message)
+        tm = self.app.tm
+        tm.setLastOID(loid)
+        tm.setLastTID(ltid)
+
+    def answerLockedTransactions(self, conn, tid_dict):
+        uuid = conn.getUUID()
+        self._uuid_set.remove(uuid)
+        for ttid, tid in tid_dict.iteritems():
+            if tid:
+                self._locked_dict[ttid] = tid
+            self._voted_dict[ttid].add(uuid)
+
+    def answerFinalTID(self, conn, tid):
         self._uuid_set.remove(conn.getUUID())
-        self._oid_set = None
-
-    def answerObjectPresent(self, conn, oid, tid):
-        logging.info('object %s:%s found', dump(oid), dump(tid))
-        self._uuid_set.remove(conn.getUUID())
-
-    def oidNotFound(self, conn, message):
-        logging.info('OID not found: %s', message)
-        self._uuid_set.remove(conn.getUUID())
-        self._object_present = False
-
-    def connectionCompleted(self, conn):
-        pass
-
-    def nodeLost(self, conn, node):
-        if not self.app.pt.operational():
-            raise VerificationFailure, 'cannot continue verification'
+        self._tid = tid
 
+    def connectionLost(self, conn, new_state):
+        self._uuid_set.discard(conn.getUUID())
+        super(VerificationManager, self).connectionLost(conn, new_state)

neo/neoctl/app.py

@@ -37,6 +37,7 @@ action_dict = {
     'tweak': 'tweakPartitionTable',
     'drop': 'dropNode',
     'kill': 'killNode',
+    'truncate': 'truncate',
 }
 
 uuid_int = (lambda ns: lambda uuid:
@@ -85,11 +86,14 @@ class TerminalNeoCTL(object):
           Get last ids.
         """
         assert not params
-        r = self.neoctl.getLastIds()
-        if r[3]:
-            return "last_tid = 0x%x" % u64(self.neoctl.getLastTransaction())
-        return "last_oid = 0x%x\nlast_tid = 0x%x\nlast_ptid = %u" % (
-            u64(r[0]), u64(r[1]), r[2])
+        ptid, backup_tid, truncate_tid = self.neoctl.getRecovery()
+        if backup_tid:
+            ltid = self.neoctl.getLastTransaction()
+            r = "backup_tid = 0x%x" % u64(backup_tid)
+        else:
+            loid, ltid = self.neoctl.getLastIds()
+            r = "last_oid = 0x%x" % u64(loid)
+        return r + "\nlast_tid = 0x%x\nlast_ptid = %u" % (u64(ltid), ptid)
 
     def getPartitionRowList(self, params):
         """
@@ -193,6 +197,19 @@ class TerminalNeoCTL(object):
         """
         return uuid_str(self.neoctl.getPrimary())
 
+    def truncate(self, params):
+        """
+          Truncate the database at the given tid.
+
+          The cluster must be in RUNNING state, without any pending transaction.
+          This causes the cluster to go back in RECOVERING state, waiting all
+          nodes to be pending (do not use 'start' command unless you're sure
+          the missing nodes don't need to be truncated).
+
+          Parameters: tid
+        """
+        self.neoctl.truncate(self.asTID(*params))
+
     def checkReplicas(self, params):
         """
           Test whether partitions have corrupted metadata

neo/neoctl/handler.py

@@ -61,3 +61,4 @@ class CommandEventHandler(EventHandler):
     answerPrimary = __answer(Packets.AnswerPrimary)
     answerLastIDs = __answer(Packets.AnswerLastIDs)
     answerLastTransaction = __answer(Packets.AnswerLastTransaction)
+    answerRecovery = __answer(Packets.AnswerRecovery)

neo/neoctl/neoctl.py

@@ -120,6 +120,12 @@ class NeoCTL(BaseApplication):
             raise RuntimeError(response)
         return response[1]
 
+    def getRecovery(self):
+        response = self.__ask(Packets.AskRecovery())
+        if response[0] != Packets.AnswerRecovery:
+            raise RuntimeError(response)
+        return response[1:]
+
     def getNodeList(self, node_type=None):
         """
           Get a list of nodes, filtering with given type.
@@ -163,6 +169,12 @@ class NeoCTL(BaseApplication):
             raise RuntimeError(response)
         return response[1]
 
+    def truncate(self, tid):
+        response = self.__ask(Packets.Truncate(tid))
+        if response[0] != Packets.Error or response[1] != ErrorCodes.ACK:
+            raise RuntimeError(response)
+        return response[2]
+
     def checkReplicas(self, *args):
         response = self.__ask(Packets.CheckReplicas(*args))
         if response[0] != Packets.Error or response[1] != ErrorCodes.ACK:

neo/scripts/runner.py

@@ -53,7 +53,6 @@ UNIT_TEST_MODULES = [
     'neo.tests.storage.testMasterHandler',
     'neo.tests.storage.testStorageApp',
     'neo.tests.storage.testStorage' + os.getenv('NEO_TESTS_ADAPTER', 'SQLite'),
-    'neo.tests.storage.testVerificationHandler',
     'neo.tests.storage.testIdentificationHandler',
     'neo.tests.storage.testTransactions',
     # client application

neo/storage/app.py

@@ -23,14 +23,14 @@ from neo.lib.protocol import uuid_str, \
     CellStates, ClusterStates, NodeTypes, Packets
 from neo.lib.node import NodeManager
 from neo.lib.connection import ListeningConnection
-from neo.lib.exception import OperationFailure, PrimaryFailure
+from neo.lib.exception import StoppedOperation, PrimaryFailure
 from neo.lib.pt import PartitionTable
 from neo.lib.util import dump
 from neo.lib.bootstrap import BootstrapManager
 from .checker import Checker
 from .database import buildDatabaseManager
 from .exception import AlreadyPendingError
-from .handlers import identification, verification, initialization
+from .handlers import identification, initialization
 from .handlers import master, hidden
 from .replicator import Replicator
 from .transactions import TransactionManager
@@ -193,14 +193,11 @@ class Application(BaseApplication):
             self.event_queue = deque()
             self.event_queue_dict = {}
             try:
-                self.verifyData()
                 self.initialize()
                 self.doOperation()
                 raise RuntimeError, 'should not reach here'
-            except OperationFailure, msg:
+            except StoppedOperation, msg:
                 logging.error('operation stopped: %s', msg)
-                if self.cluster_state == ClusterStates.STOPPING_BACKUP:
-                    self.dm.setBackupTID(None)
             except PrimaryFailure, msg:
                 logging.error('primary master is down: %s', msg)
             finally:
@@ -247,30 +244,11 @@ class Application(BaseApplication):
             self.pt = PartitionTable(num_partitions, num_replicas)
             self.loadPartitionTable()
 
-    def verifyData(self):
-        """Verify data under the control by a primary master node.
-        Connections from client nodes may not be accepted at this stage."""
-        logging.info('verifying data')
-
-        handler = verification.VerificationHandler(self)
-        self.master_conn.setHandler(handler)
-        _poll = self._poll
-
-        while not self.operational:
-            _poll()
-
     def initialize(self):
-        """ Retreive partition table and node informations from the primary """
         logging.debug('initializing...')
         _poll = self._poll
-        handler = initialization.InitializationHandler(self)
-        self.master_conn.setHandler(handler)
-
-        # ask node list and partition table
-        self.pt.clear()
-        self.master_conn.ask(Packets.AskNodeInformation())
-        self.master_conn.ask(Packets.AskPartitionTable())
-        while self.master_conn.isPending():
+        self.master_conn.setHandler(initialization.InitializationHandler(self))
+        while not self.operational:
             _poll()
         self.ready = True
         self.replicator.populate()

neo/storage/database/importer.py

@@ -297,8 +297,9 @@ class ImporterDatabaseManager(DatabaseManager):
         self.db = buildDatabaseManager(main['adapter'],
             (main['database'], main.get('engine'), main['wait']))
         for x in """query erase getConfiguration _setConfiguration
-                    getPartitionTable changePartitionTable getUnfinishedTIDList
-                    dropUnfinishedData storeTransaction finishTransaction
+                    getPartitionTable changePartitionTable
+                    getUnfinishedTIDDict dropUnfinishedData abortTransaction
+                    storeTransaction lockTransaction unlockTransaction
                     storeData _pruneData
                  """.split():
             setattr(self, x, getattr(self.db, x))
@@ -421,7 +422,7 @@ class ImporterDatabaseManager(DatabaseManager):
         logging.warning("All data are imported. You should change"
             " your configuration to use the native backend and restart.")
         self._import = None
-        for x in """getObject objectPresent getReplicationTIDList
+        for x in """getObject getReplicationTIDList
                  """.split():
             setattr(self, x, getattr(self.db, x))
 
@@ -434,23 +435,11 @@ class ImporterDatabaseManager(DatabaseManager):
         zodb = self.zodb[bisect(self.zodb_index, oid) - 1]
         return zodb, oid - zodb.shift_oid
 
-    def getLastIDs(self, all=True):
-        tid, _, _, oid = self.db.getLastIDs(all)
+    def getLastIDs(self):
+        tid, _, _, oid = self.db.getLastIDs()
         return (max(tid, util.p64(self.zodb_ltid)), None, None,
                 max(oid, util.p64(self.zodb_loid)))
 
-    def objectPresent(self, oid, tid, all=True):
-        r = self.db.objectPresent(oid, tid, all)
-        if not r:
-            u_oid = util.u64(oid)
-            u_tid = util.u64(tid)
-            if self.inZodb(u_oid, u_tid):
-                zodb, oid = self.zodbFromOid(u_oid)
-                try:
-                    return zodb.loadSerial(util.p64(oid), tid)
-                except POSKeyError:
-                    pass
-
     def getObject(self, oid, tid=None, before_tid=None):
         u64 = util.u64
         u_oid = u64(oid)
@@ -511,6 +500,16 @@ class ImporterDatabaseManager(DatabaseManager):
         else:
             return self.db.getTransaction(tid, all)
 
+    def getFinalTID(self, ttid):
+        if u64(ttid) <= self.zodb_ltid and self._import:
+            raise NotImplementedError
+        return self.db.getFinalTID(ttid)
+
+    def deleteTransaction(self, tid):
+        if u64(tid) <= self.zodb_ltid and self._import:
+            raise NotImplementedError
+        self.db.deleteTransaction(tid)
+
     def getReplicationTIDList(self, min_tid, max_tid, length, partition):
         p64 = util.p64
         tid = p64(self.zodb_tid)

neo/storage/database/manager.py

@@ -17,6 +17,7 @@
 from collections import defaultdict
 from functools import wraps
 from neo.lib import logging, util
+from neo.lib.exception import DatabaseFailure
 from neo.lib.protocol import ZERO_TID, BackendNotImplemented
 
 def lazymethod(func):
@@ -94,6 +95,22 @@ class DatabaseManager(object):
         """
         raise NotImplementedError
 
+    def nonempty(self, table):
+        """Check whether table is empty or return None if it does not exist"""
+        raise NotImplementedError
+
+    def _checkNoUnfinishedTransactions(self, *hint):
+        if self.nonempty('ttrans') or self.nonempty('tobj'):
+            raise DatabaseFailure(
+                "The database can not be upgraded because you have unfinished"
+                " transactions. Use an older version of NEO to verify them.")
+
+    def _getVersion(self):
+        version = int(self.getConfiguration("version") or 0)
+        if self.VERSION < version:
+            raise DatabaseFailure("The database can not be downgraded.")
+        return version
+
     def doOperation(self, app):
         pass
 
@@ -194,10 +211,18 @@ class DatabaseManager(object):
     def getBackupTID(self):
         return util.bin(self.getConfiguration('backup_tid'))
 
-    def setBackupTID(self, backup_tid):
-        tid = util.dump(backup_tid)
+    def _setBackupTID(self, tid):
+        tid = util.dump(tid)
         logging.debug('backup_tid = %s', tid)
-        return self.setConfiguration('backup_tid', tid)
+        return self._setConfiguration('backup_tid', tid)
+
+    def getTruncateTID(self):
+        return util.bin(self.getConfiguration('truncate_tid'))
+
+    def _setTruncateTID(self, tid):
+        tid = util.dump(tid)
+        logging.debug('truncate_tid = %s', tid)
+        return self._setConfiguration('truncate_tid', tid)
 
     def _setPackTID(self, tid):
         self._setConfiguration('_pack_tid', tid)
@@ -222,10 +247,10 @@ class DatabaseManager(object):
         """
         raise NotImplementedError
 
-    def _getLastIDs(self, all=True):
+    def _getLastIDs(self):
         raise NotImplementedError
 
-    def getLastIDs(self, all=True):
+    def getLastIDs(self):
         trans, obj, oid = self._getLastIDs()
         if trans:
             tid = max(trans.itervalues())
@@ -241,16 +266,16 @@ class DatabaseManager(object):
         trans = obj = {}
         return tid, trans, obj, oid
 
-    def getUnfinishedTIDList(self):
-        """Return a list of unfinished transaction's IDs."""
+    def _getUnfinishedTIDDict(self):
         raise NotImplementedError
 
-    def objectPresent(self, oid, tid, all = True):
-        """Return true iff an object specified by a given pair of an
-        object ID and a transaction ID is present in a database.
-        Otherwise, return false. If all is true, the object must be
-        searched from unfinished transactions as well."""
-        raise NotImplementedError
+    def getUnfinishedTIDDict(self):
+        trans, obj = self._getUnfinishedTIDDict()
+        obj = dict.fromkeys(obj)
+        obj.update(trans)
+        p64 = util.p64
+        return {p64(ttid): None if tid is None else p64(tid)
+                for ttid, tid in obj.iteritems()}
 
     @fallback
     def getLastObjectTID(self, oid):
@@ -478,14 +503,18 @@ class DatabaseManager(object):
             data_tid = p64(data_tid)
         return p64(current_tid), data_tid, is_current
 
-    def finishTransaction(self, tid):
-        """Finish a transaction specified by a given ID, by moving
-        temporarily data to a finished area."""
+    def lockTransaction(self, tid, ttid):
+        """Mark voted transaction 'ttid' as committed with given 'tid'"""
+        raise NotImplementedError
+
+    def unlockTransaction(self, tid, ttid):
+        """Finalize a transaction by moving data to a finished area."""
+        raise NotImplementedError
+
+    def abortTransaction(self, ttid):
         raise NotImplementedError
 
-    def deleteTransaction(self, tid, oid_list=()):
-        """Delete a transaction and its content specified by a given ID and
-        an oid list"""
+    def deleteTransaction(self, tid):
         raise NotImplementedError
 
     def deleteObject(self, oid, serial=None):
@@ -498,12 +527,13 @@ class DatabaseManager(object):
         and max_tid (included)"""
         raise NotImplementedError
 
-    def truncate(self, tid):
-        assert tid not in (None, ZERO_TID), tid
-        assert self.getBackupTID()
-        self.setBackupTID(None) # XXX
+    def truncate(self):
+        tid = self.getTruncateTID()
+        if tid:
+            assert tid != ZERO_TID, tid
             for partition in xrange(self.getNumPartitions()):
                 self._deleteRange(partition, tid)
+            self._setTruncateTID(None)
             self.commit()
 
     def getTransaction(self, tid, all = False):

neo/storage/database/mysqldb.py

@@ -16,9 +16,10 @@
 
 from binascii import a2b_hex
 import MySQLdb
-from MySQLdb import DataError, IntegrityError, OperationalError
+from MySQLdb import DataError, IntegrityError, \
+    OperationalError, ProgrammingError
 from MySQLdb.constants.CR import SERVER_GONE_ERROR, SERVER_LOST
-from MySQLdb.constants.ER import DATA_TOO_LONG, DUP_ENTRY
+from MySQLdb.constants.ER import DATA_TOO_LONG, DUP_ENTRY, NO_SUCH_TABLE
 from array import array
 from hashlib import sha1
 import os
@@ -42,6 +43,7 @@ def getPrintableQuery(query, max=70):
 class MySQLDatabaseManager(DatabaseManager):
     """This class manages a database on MySQL."""
 
+    VERSION = 1
     ENGINES = "InnoDB", "TokuDB"
     _engine = ENGINES[0] # default engine
 
@@ -144,16 +146,33 @@ class MySQLDatabaseManager(DatabaseManager):
         self.query("DROP TABLE IF EXISTS"
             " config, pt, trans, obj, data, bigdata, ttrans, tobj")
 
+    def nonempty(self, table):
+        try:
+            return bool(self.query("SELECT 1 FROM %s LIMIT 1" % table))
+        except ProgrammingError, (code, _):
+            if code != NO_SUCH_TABLE:
+                raise
+
     def _setup(self):
         self._config.clear()
         q = self.query
         p = engine = self._engine
-        # The table "config" stores configuration parameters which affect the
-        # persistent data.
-        q("""CREATE TABLE IF NOT EXISTS config (
+
+        if self.nonempty("config") is None:
+            # The table "config" stores configuration
+            # parameters which affect the persistent data.
+            q("""CREATE TABLE config (
                      name VARBINARY(255) NOT NULL PRIMARY KEY,
                      value VARBINARY(255) NULL
                  ) ENGINE=""" + engine)
+        else:
+            # Automatic migration.
+            version = self._getVersion()
+            if version < 1:
+                self._checkNoUnfinishedTransactions()
+                q("DROP TABLE IF EXISTS ttrans")
+
+        self._setConfiguration("version", self.VERSION)
 
         # The table "pt" stores a partition table.
         q("""CREATE TABLE IF NOT EXISTS pt (
@@ -214,7 +233,7 @@ class MySQLDatabaseManager(DatabaseManager):
         # The table "ttrans" stores information on uncommitted transactions.
         q("""CREATE TABLE IF NOT EXISTS ttrans (
                  `partition` SMALLINT UNSIGNED NOT NULL,
-                 tid BIGINT UNSIGNED NOT NULL,
+                 tid BIGINT UNSIGNED,
                  packed BOOLEAN NOT NULL,
                  oids MEDIUMBLOB NOT NULL,
                  user BLOB NOT NULL,
@@ -274,7 +293,7 @@ class MySQLDatabaseManager(DatabaseManager):
         return self.query("SELECT MAX(t) FROM (SELECT MAX(tid) as t FROM trans"
             " WHERE tid<=%s GROUP BY `partition`) as t" % max_tid)[0][0]
 
-    def _getLastIDs(self, all=True):
+    def _getLastIDs(self):
         p64 = util.p64
         q = self.query
         trans = {partition: p64(tid)
@@ -285,29 +304,21 @@ class MySQLDatabaseManager(DatabaseManager):
                                     " FROM obj GROUP BY `partition`")}
         oid = q("SELECT MAX(oid) FROM (SELECT MAX(oid) AS oid FROM obj"
                                       " GROUP BY `partition`) as t")[0][0]
-        if all:
-            tid = q("SELECT MAX(tid) FROM ttrans")[0][0]
-            if tid is not None:
-                trans[None] = p64(tid)
-            tid, toid = q("SELECT MAX(tid), MAX(oid) FROM tobj")[0]
-            if tid is not None:
-                obj[None] = p64(tid)
-            if toid is not None and (oid < toid or oid is None):
-                oid = toid
         return trans, obj, None if oid is None else p64(oid)
 
-    def getUnfinishedTIDList(self):
-        p64 = util.p64
-        return [p64(t[0]) for t in self.query("SELECT tid FROM ttrans"
-                                       " UNION SELECT tid FROM tobj")]
-
-    def objectPresent(self, oid, tid, all = True):
-        oid = util.u64(oid)
-        tid = util.u64(tid)
+    def _getUnfinishedTIDDict(self):
         q = self.query
-        return q("SELECT 1 FROM obj WHERE `partition`=%d AND oid=%d AND tid=%d"
-                 % (self._getPartition(oid), oid, tid)) or all and \
-               q("SELECT 1 FROM tobj WHERE tid=%d AND oid=%d" % (tid, oid))
+        return q("SELECT ttid, tid FROM ttrans"), (ttid
+            for ttid, in q("SELECT DISTINCT tid FROM tobj"))
+
+    def getFinalTID(self, ttid):
+        ttid = util.u64(ttid)
+        # MariaDB is smart enough to realize that 'ttid' is constant.
+        r = self.query("SELECT tid FROM trans"
+            " WHERE `partition`=%s AND tid>=ttid AND ttid=%s LIMIT 1"
+            % (self._getPartition(ttid), ttid))
+        if r:
+            return util.p64(r[0][0])
 
     def getLastObjectTID(self, oid):
         oid = util.u64(oid)
@@ -450,9 +461,9 @@ class MySQLDatabaseManager(DatabaseManager):
             oid_list, user, desc, ext, packed, ttid = transaction
             partition = self._getPartition(tid)
             assert packed in (0, 1)
-            q("REPLACE INTO %s VALUES (%d,%d,%i,'%s','%s','%s','%s',%d)" % (
-                trans_table, partition, tid, packed, e(''.join(oid_list)),
-                e(user), e(desc), e(ext), u64(ttid)))
+            q("REPLACE INTO %s VALUES (%s,%s,%s,'%s','%s','%s','%s',%s)" % (
+                trans_table, partition, 'NULL' if temporary else tid, packed,
+                e(''.join(oid_list)), e(user), e(desc), e(ext), u64(ttid)))
         if temporary:
             self.commit()
 
@@ -544,40 +555,40 @@ class MySQLDatabaseManager(DatabaseManager):
         r = self.query(sql)
         return r[0] if r else (None, None)
 
-    def finishTransaction(self, tid):
+    def lockTransaction(self, tid, ttid):
+        u64 = util.u64
+        self.query("UPDATE ttrans SET tid=%d WHERE ttid=%d LIMIT 1"
+                   % (u64(tid), u64(ttid)))
+        self.commit()
+
+    def unlockTransaction(self, tid, ttid):
         q = self.query
-        tid = util.u64(tid)
-        sql = " FROM tobj WHERE tid=%d" % tid
+        u64 = util.u64
+        tid = u64(tid)
+        sql = " FROM tobj WHERE tid=%d" % u64(ttid)
         data_id_list = [x for x, in q("SELECT data_id" + sql) if x]
-        q("INSERT INTO obj SELECT *" + sql)
-        q("DELETE FROM tobj WHERE tid=%d" % tid)
+        q("INSERT INTO obj SELECT `partition`, oid, %d, data_id, value_tid %s"
+          % (tid, sql))
+        q("DELETE" + sql)
         q("INSERT INTO trans SELECT * FROM ttrans WHERE tid=%d" % tid)
         q("DELETE FROM ttrans WHERE tid=%d" % tid)
         self.releaseData(data_id_list)
         self.commit()
 
-    def deleteTransaction(self, tid, oid_list=()):
-        u64 = util.u64
-        tid = u64(tid)
-        getPartition = self._getPartition
+    def abortTransaction(self, ttid):
+        ttid = util.u64(ttid)
         q = self.query
-        sql = " FROM tobj WHERE tid=%d" % tid
+        sql = " FROM tobj WHERE tid=%s" % ttid
         data_id_list = [x for x, in q("SELECT data_id" + sql) if x]
-        self.releaseData(data_id_list)
-        q("DELETE" + sql)
-        q("""DELETE FROM ttrans WHERE tid = %d""" % tid)
-        q("""DELETE FROM trans WHERE `partition` = %d AND tid = %d""" %
-            (getPartition(tid), tid))
-        # delete from obj using indexes
-        data_id_list = set(data_id_list)
-        for oid in oid_list:
-            oid = u64(oid)
-            sql = " FROM obj WHERE `partition`=%d AND oid=%d AND tid=%d" \
-               % (getPartition(oid), oid, tid)
-            data_id_list.update(*q("SELECT data_id" + sql))
         q("DELETE" + sql)
-        data_id_list.discard(None)
-        self._pruneData(data_id_list)
+        q("DELETE FROM ttrans WHERE ttid=%s" % ttid)
+        self.releaseData(data_id_list, True)
+
+    def deleteTransaction(self, tid):
+        tid = util.u64(tid)
+        getPartition = self._getPartition
+        self.query("DELETE FROM trans WHERE `partition`=%s AND tid=%s" %
+            (self._getPartition(tid), tid))
 
     def deleteObject(self, oid, serial=None):
         u64 = util.u64

neo/storage/database/sqlite.py

@@ -66,6 +66,8 @@ class SQLiteDatabaseManager(DatabaseManager):
              never be used for small requests.
     """
 
+    VERSION = 1
+
     def __init__(self, *args, **kw):
         super(SQLiteDatabaseManager, self).__init__(*args, **kw)
         self._config = {}
@@ -101,15 +103,32 @@ class SQLiteDatabaseManager(DatabaseManager):
         for t in 'config', 'pt', 'trans', 'obj', 'data', 'ttrans', 'tobj':
             self.query('DROP TABLE IF EXISTS ' + t)
 
+    def nonempty(self, table):
+        try:
+            return bool(self.query(
+                "SELECT 1 FROM %s LIMIT 1" % table).fetchone())
+        except sqlite3.OperationalError as e:
+            if not e.args[0].startswith("no such table:"):
+                raise
+
     def _setup(self):
         self._config.clear()
         q = self.query
-        # The table "config" stores configuration parameters which affect the
-        # persistent data.
-        q("""CREATE TABLE IF NOT EXISTS config (
-                 name TEXT NOT NULL PRIMARY KEY,
-                 value TEXT)
-          """)
+
+        if self.nonempty("config") is None:
+            # The table "config" stores configuration
+            # parameters which affect the persistent data.
+            q("CREATE TABLE IF NOT EXISTS config ("
+              "  name TEXT NOT NULL PRIMARY KEY,"
+              "  value TEXT)")
+        else:
+            # Automatic migration.
+            version = self._getVersion()
+            if version < 1:
+                self._checkNoUnfinishedTransactions()
+                q("DROP TABLE IF EXISTS ttrans")
+
+        self._setConfiguration("version", self.VERSION)
 
         # The table "pt" stores a partition table.
         q("""CREATE TABLE IF NOT EXISTS pt (
@@ -162,7 +181,7 @@ class SQLiteDatabaseManager(DatabaseManager):
         # The table "ttrans" stores information on uncommitted transactions.
         q("""CREATE TABLE IF NOT EXISTS ttrans (
                  partition INTEGER NOT NULL,
-                 tid INTEGER NOT NULL,
+                 tid INTEGER,
                  packed BOOLEAN NOT NULL,
                  oids BLOB NOT NULL,
                  user BLOB NOT NULL,
@@ -221,7 +240,7 @@ class SQLiteDatabaseManager(DatabaseManager):
         return self.query("SELECT MAX(tid) FROM trans WHERE tid<=?",
                           (max_tid,)).next()[0]
 
-    def _getLastIDs(self, all=True):
+    def _getLastIDs(self):
         p64 = util.p64
         q = self.query
         trans = {partition: p64(tid)
@@ -232,30 +251,21 @@ class SQLiteDatabaseManager(DatabaseManager):
                                     " FROM obj GROUP BY partition")}
         oid = q("SELECT MAX(oid) FROM (SELECT MAX(oid) AS oid FROM obj"
                                       " GROUP BY partition) as t").next()[0]
-        if all:
-            tid = q("SELECT MAX(tid) FROM ttrans").next()[0]
-            if tid is not None:
-                trans[None] = p64(tid)
-            tid, toid = q("SELECT MAX(tid), MAX(oid) FROM tobj").next()
-            if tid is not None:
-                obj[None] = p64(tid)
-            if toid is not None and (oid < toid or oid is None):
-                oid = toid
         return trans, obj, None if oid is None else p64(oid)
 
-    def getUnfinishedTIDList(self):
-        p64 = util.p64
-        return [p64(t[0]) for t in self.query("SELECT tid FROM ttrans"
-                                       " UNION SELECT tid FROM tobj")]
-
-    def objectPresent(self, oid, tid, all=True):
-        oid = util.u64(oid)
-        tid = util.u64(tid)
+    def _getUnfinishedTIDDict(self):
         q = self.query
-        return q("SELECT 1 FROM obj WHERE partition=? AND oid=? AND tid=?",
-                 (self._getPartition(oid), oid, tid)).fetchone() or all and \
-               q("SELECT 1 FROM tobj WHERE tid=? AND oid=?",
-                 (tid, oid)).fetchone()
+        return q("SELECT ttid, tid FROM ttrans"), (ttid
+            for ttid, in q("SELECT DISTINCT tid FROM tobj"))
+
+    def getFinalTID(self, ttid):
+        ttid = util.u64(ttid)
+        # As of SQLite 3.8.7.1, 'tid>=ttid' would ignore the index on tid,
+        # even though ttid is a constant.
+        for tid, in self.query("SELECT tid FROM trans"
+                " WHERE partition=? AND tid>=? AND ttid=? LIMIT 1",
+                (self._getPartition(ttid), ttid, ttid)):
+            return util.p64(tid)
 
     def getLastObjectTID(self, oid):
         oid = util.u64(oid)
@@ -362,7 +372,8 @@ class SQLiteDatabaseManager(DatabaseManager):
             partition = self._getPartition(tid)
             assert packed in (0, 1)
             q("INSERT OR FAIL INTO %strans VALUES (?,?,?,?,?,?,?,?)" % T,
-                (partition, tid, packed, buffer(''.join(oid_list)),
+                (partition, None if temporary else tid,
+                 packed, buffer(''.join(oid_list)),
                  buffer(user), buffer(desc), buffer(ext), u64(ttid)))
         if temporary:
             self.commit()
@@ -407,40 +418,41 @@ class SQLiteDatabaseManager(DatabaseManager):
         r = r.fetchone()
         return r or (None, None)
 
-    def finishTransaction(self, tid):
-        args = util.u64(tid),
+    def lockTransaction(self, tid, ttid):
+        u64 = util.u64
+        self.query("UPDATE ttrans SET tid=? WHERE ttid=?",
+                   (u64(tid), u64(ttid)))
+        self.commit()
+
+    def unlockTransaction(self, tid, ttid):
         q = self.query
+        u64 = util.u64
+        tid = u64(tid)
+        ttid = u64(ttid)
         sql = " FROM tobj WHERE tid=?"
-        data_id_list = [x for x, in q("SELECT data_id" + sql, args) if x]
-        q("INSERT OR FAIL INTO obj SELECT *" + sql, args)
-        q("DELETE FROM tobj WHERE tid=?", args)
-        q("INSERT OR FAIL INTO trans SELECT * FROM ttrans WHERE tid=?", args)
-        q("DELETE FROM ttrans WHERE tid=?", args)
+        data_id_list = [x for x, in q("SELECT data_id" + sql, (ttid,)) if x]
+        q("INSERT INTO obj SELECT partition, oid, ?, data_id, value_tid" + sql,
+          (tid, ttid))
+        q("DELETE" + sql, (ttid,))
+        q("INSERT INTO trans SELECT * FROM ttrans WHERE tid=?", (tid,))
+        q("DELETE FROM ttrans WHERE tid=?", (tid,))
         self.releaseData(data_id_list)
         self.commit()
 
-    def deleteTransaction(self, tid, oid_list=()):
-        u64 = util.u64
-        tid = u64(tid)
-        getPartition = self._getPartition
+    def abortTransaction(self, ttid):
+        args = util.u64(ttid),
         q = self.query
         sql = " FROM tobj WHERE tid=?"
-        data_id_list = [x for x, in q("SELECT data_id" + sql, (tid,)) if x]
-        self.releaseData(data_id_list)
-        q("DELETE" + sql, (tid,))
-        q("DELETE FROM ttrans WHERE tid=?", (tid,))
-        q("DELETE FROM trans WHERE partition=? AND tid=?",
-            (getPartition(tid), tid))
-        # delete from obj using indexes
-        data_id_list = set(data_id_list)
-        for oid in oid_list:
-            oid = u64(oid)
-            sql = " FROM obj WHERE partition=? AND oid=? AND tid=?"
-            args = getPartition(oid), oid, tid
-            data_id_list.update(*q("SELECT data_id" + sql, args))
+        data_id_list = [x for x, in q("SELECT data_id" + sql, args) if x]
         q("DELETE" + sql, args)
-        data_id_list.discard(None)
-        self._pruneData(data_id_list)
+        q("DELETE FROM ttrans WHERE ttid=?", args)
+        self.releaseData(data_id_list, True)
+
+    def deleteTransaction(self, tid):
+        tid = util.u64(tid)
+        getPartition = self._getPartition
+        self.query("DELETE FROM trans WHERE partition=? AND tid=?",
+            (self._getPartition(tid), tid))
 
     def deleteObject(self, oid, serial=None):
         oid = util.u64(oid)

neo/storage/handlers/__init__.py

@@ -16,8 +16,8 @@
 
 from neo.lib import logging
 from neo.lib.handler import EventHandler
-from neo.lib.exception import PrimaryFailure, OperationFailure
-from neo.lib.protocol import uuid_str, NodeStates, NodeTypes
+from neo.lib.exception import PrimaryFailure, StoppedOperation
+from neo.lib.protocol import uuid_str, NodeStates, NodeTypes, Packets
 
 class BaseMasterHandler(EventHandler):
 
@@ -27,7 +27,7 @@ class BaseMasterHandler(EventHandler):
             raise PrimaryFailure('connection lost')
 
     def stopOperation(self, conn):
-        raise OperationFailure('operation stopped')
+        raise StoppedOperation
 
     def reelectPrimary(self, conn):
         raise PrimaryFailure('re-election occurs')
@@ -48,7 +48,7 @@ class BaseMasterHandler(EventHandler):
                     erase = state == NodeStates.DOWN
                     self.app.shutdown(erase=erase)
                 elif state == NodeStates.HIDDEN:
-                    raise OperationFailure
+                    raise StoppedOperation
             elif node_type == NodeTypes.CLIENT and state != NodeStates.RUNNING:
                 logging.info('Notified of non-running client, abort (%s)',
                         uuid_str(uuid))
@@ -56,3 +56,6 @@ class BaseMasterHandler(EventHandler):
 
     def answerUnfinishedTransactions(self, conn, *args, **kw):
         self.app.replicator.setUnfinishedTIDList(*args, **kw)
+
+    def askFinalTID(self, conn, ttid):
+        conn.answer(Packets.AnswerFinalTID(self.app.dm.getFinalTID(ttid)))

neo/storage/handlers/client.py

@@ -19,7 +19,7 @@ from neo.lib.handler import EventHandler
 from neo.lib.util import dump, makeChecksum
 from neo.lib.protocol import Packets, LockState, Errors, ProtocolError, \
     ZERO_HASH, INVALID_PARTITION
-from ..transactions import ConflictError, DelayedError
+from ..transactions import ConflictError, DelayedError, NotRegisteredError
 from ..exception import AlreadyPendingError
 import time
 
@@ -68,21 +68,17 @@ class ClientOperationHandler(EventHandler):
     def abortTransaction(self, conn, ttid):
         self.app.tm.abort(ttid)
 
-    def askStoreTransaction(self, conn, ttid, user, desc, ext, oid_list):
+    def askStoreTransaction(self, conn, ttid, *txn_info):
         self.app.tm.register(conn.getUUID(), ttid)
-        self.app.tm.storeTransaction(ttid, oid_list, user, desc, ext, False)
-        conn.answer(Packets.AnswerStoreTransaction(ttid))
+        self.app.tm.vote(ttid, txn_info)
+        conn.answer(Packets.AnswerStoreTransaction())
+
+    def askVoteTransaction(self, conn, ttid):
+        self.app.tm.vote(ttid)
+        conn.answer(Packets.AnswerVoteTransaction())
 
     def _askStoreObject(self, conn, oid, serial, compression, checksum, data,
             data_serial, ttid, unlock, request_time):
-        if ttid not in self.app.tm:
-            # transaction was aborted, cancel this event
-            logging.info('Forget store of %s:%s by %s delayed by %s',
-                    dump(oid), dump(serial), dump(ttid),
-                    dump(self.app.tm.getLockingTID(oid)))
-            # send an answer as the client side is waiting for it
-            conn.answer(Packets.AnswerStoreObject(0, oid, serial))
-            return
         try:
             self.app.tm.storeObject(ttid, serial, oid, compression,
                     checksum, data, data_serial, unlock)
@@ -101,6 +97,13 @@ class ClientOperationHandler(EventHandler):
                     raise_on_duplicate=unlock)
             except AlreadyPendingError:
                 conn.answer(Errors.AlreadyPending(dump(oid)))
+        except NotRegisteredError:
+            # transaction was aborted, cancel this event
+            logging.info('Forget store of %s:%s by %s delayed by %s',
+                    dump(oid), dump(serial), dump(ttid),
+                    dump(self.app.tm.getLockingTID(oid)))
+            # send an answer as the client side is waiting for it
+            conn.answer(Packets.AnswerStoreObject(0, oid, serial))
         else:
             if SLOW_STORE is not None:
                 duration = time.time() - request_time
@@ -189,14 +192,6 @@ class ClientOperationHandler(EventHandler):
         self._askCheckCurrentSerial(conn, ttid, serial, oid, time.time())
 
     def _askCheckCurrentSerial(self, conn, ttid, serial, oid, request_time):
-        if ttid not in self.app.tm:
-            # transaction was aborted, cancel this event
-            logging.info('Forget serial check of %s:%s by %s delayed by %s',
-                dump(oid), dump(serial), dump(ttid),
-                dump(self.app.tm.getLockingTID(oid)))
-            # send an answer as the client side is waiting for it
-            conn.answer(Packets.AnswerCheckCurrentSerial(0, oid, serial))
-            return
         try:
             self.app.tm.checkCurrentSerial(ttid, serial, oid)
         except ConflictError, err:
@@ -210,6 +205,13 @@ class ClientOperationHandler(EventHandler):
                     serial, oid, request_time), key=(oid, ttid))
             except AlreadyPendingError:
                 conn.answer(Errors.AlreadyPending(dump(oid)))
+        except NotRegisteredError:
+            # transaction was aborted, cancel this event
+            logging.info('Forget serial check of %s:%s by %s delayed by %s',
+                dump(oid), dump(serial), dump(ttid),
+                dump(self.app.tm.getLockingTID(oid)))
+            # send an answer as the client side is waiting for it
+            conn.answer(Packets.AnswerCheckCurrentSerial(0, oid, serial))
         else:
             if SLOW_STORE is not None:
                 duration = time.time() - request_time

neo/storage/handlers/initialization.py

@@ -15,24 +15,23 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 from . import BaseMasterHandler
-from neo.lib import logging, protocol
+from neo.lib import logging
+from neo.lib.protocol import Packets, ProtocolError, ZERO_TID
 
 class InitializationHandler(BaseMasterHandler):
 
     def answerNodeInformation(self, conn):
         pass
 
-    def answerPartitionTable(self, conn, ptid, row_list):
+    def sendPartitionTable(self, conn, ptid, row_list):
         app = self.app
         pt = app.pt
         pt.load(ptid, row_list, self.app.nm)
         if not pt.filled():
-            raise protocol.ProtocolError('Partial partition table received')
-        logging.debug('Got the partition table:')
-        self.app.pt.log()
+            raise ProtocolError('Partial partition table received')
         # Install the partition table into the database for persistency.
         cell_list = []
-        num_partitions = app.pt.getPartitions()
+        num_partitions = pt.getPartitions()
         unassigned_set = set(xrange(num_partitions))
         for offset in xrange(num_partitions):
             for cell in pt.getCellList(offset):
@@ -46,12 +45,47 @@ class InitializationHandler(BaseMasterHandler):
 
         app.dm.changePartitionTable(ptid, cell_list, reset=True)
 
-    def notifyPartitionChanges(self, conn, ptid, cell_list):
-        # XXX: This is safe to ignore those notifications because all of the
-        # following applies:
-        # - we first ask for node information, and *then* partition
-        #   table content, so it is possible to get notifyPartitionChanges
-        #   packets in between (or even before asking for node information).
-        # - this handler will be changed after receiving answerPartitionTable
-        #   and before handling the next packet
-        logging.debug('ignoring notifyPartitionChanges during initialization')
+    def truncate(self, conn, tid):
+        dm = self.app.dm
+        dm._setBackupTID(None)
+        dm._setTruncateTID(tid)
+        dm.commit()
+
+    def askRecovery(self, conn):
+        app = self.app
+        conn.answer(Packets.AnswerRecovery(
+            app.pt.getID(),
+            app.dm.getBackupTID(),
+            app.dm.getTruncateTID()))
+
+    def askLastIDs(self, conn):
+        dm = self.app.dm
+        dm.truncate()
+        ltid, _, _, loid = dm.getLastIDs()
+        conn.answer(Packets.AnswerLastIDs(loid, ltid))
+
+    def askPartitionTable(self, conn):
+        pt = self.app.pt
+        conn.answer(Packets.AnswerPartitionTable(pt.getID(), pt.getRowList()))
+
+    def askLockedTransactions(self, conn):
+        conn.answer(Packets.AnswerLockedTransactions(
+            self.app.dm.getUnfinishedTIDDict()))
+
+    def validateTransaction(self, conn, ttid, tid):
+        dm = self.app.dm
+        dm.lockTransaction(tid, ttid)
+        dm.unlockTransaction(tid, ttid)
+
+    def startOperation(self, conn, backup):
+        self.app.operational = True
+        # XXX: see comment in protocol
+        dm = self.app.dm
+        if backup:
+            if dm.getBackupTID():
+                return
+            tid = dm.getLastIDs()[0] or ZERO_TID
+        else:
+            tid = None
+        dm._setBackupTID(tid)
+        dm.commit()

neo/storage/handlers/master.py

@@ -16,13 +16,21 @@
 
 from neo.lib import logging
 from neo.lib.util import dump
-from neo.lib.protocol import Packets, ProtocolError
+from neo.lib.protocol import Packets, ProtocolError, ZERO_TID
 from . import BaseMasterHandler
 
 
 class MasterOperationHandler(BaseMasterHandler):
     """ This handler is used for the primary master """
 
+    def startOperation(self, conn, backup):
+        # XXX: see comment in protocol
+        assert self.app.operational and backup
+        dm = self.app.dm
+        if not dm.getBackupTID():
+            dm._setBackupTID(dm.getLastIDs()[0] or ZERO_TID)
+            dm.commit()
+
     def notifyTransactionFinished(self, conn, *args, **kw):
         self.app.replicator.transactionFinished(*args, **kw)
 
@@ -42,17 +50,11 @@ class MasterOperationHandler(BaseMasterHandler):
         # Check changes for replications
         app.replicator.notifyPartitionChanges(cell_list)
 
-    def askLockInformation(self, conn, ttid, tid, oid_list):
-        if not ttid in self.app.tm:
-            raise ProtocolError('Unknown transaction')
-        self.app.tm.lock(ttid, tid, oid_list)
-        if not conn.isClosed():
+    def askLockInformation(self, conn, ttid, tid):
+        self.app.tm.lock(ttid, tid)
         conn.answer(Packets.AnswerInformationLocked(ttid))
 
     def notifyUnlockInformation(self, conn, ttid):
-        if not ttid in self.app.tm:
-            raise ProtocolError('Unknown transaction')
-        # TODO: send an answer
         self.app.tm.unlock(ttid)
 
     def askPack(self, conn, tid):
@@ -60,17 +62,11 @@ class MasterOperationHandler(BaseMasterHandler):
         logging.info('Pack started, up to %s...', dump(tid))
         app.dm.pack(tid, app.tm.updateObjectDataForPack)
         logging.info('Pack finished.')
-        if not conn.isClosed():
         conn.answer(Packets.AnswerPack(True))
 
     def replicate(self, conn, tid, upstream_name, source_dict):
         self.app.replicator.backup(tid, {p: a and (a, upstream_name)
                                          for p, a in source_dict.iteritems()})
 
-    def truncate(self, conn, tid):
-        self.app.replicator.cancel()
-        self.app.dm.truncate(tid)
-        conn.close()
-
     def checkPartition(self, conn, *args):
         self.app.checker(*args)

neo/storage/handlers/verification.py

-#
-# Copyright (C) 2006-2015  Nexedi SA
-#
-# This program is free software; you can redistribute it and/or
-# modify it under the terms of the GNU General Public License
-# as published by the Free Software Foundation; either version 2
-# of the License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program.  If not, see <http://www.gnu.org/licenses/>.
-
-from . import BaseMasterHandler
-from neo.lib import logging
-from neo.lib.protocol import Packets, Errors, INVALID_TID, ZERO_TID
-from neo.lib.util import dump
-from neo.lib.exception import OperationFailure
-
-class VerificationHandler(BaseMasterHandler):
-    """This class deals with events for a verification phase."""
-
-    def askLastIDs(self, conn):
-        app = self.app
-        ltid, _, _, loid = app.dm.getLastIDs()
-        conn.answer(Packets.AnswerLastIDs(
-            loid,
-            ltid,
-            app.pt.getID(),
-            app.dm.getBackupTID()))
-
-    def askPartitionTable(self, conn):
-        pt = self.app.pt
-        conn.answer(Packets.AnswerPartitionTable(pt.getID(), pt.getRowList()))
-
-    def notifyPartitionChanges(self, conn, ptid, cell_list):
-        """This is very similar to Send Partition Table, except that
-        the information is only about changes from the previous."""
-        app = self.app
-        if ptid <= app.pt.getID():
-            # Ignore this packet.
-            logging.debug('ignoring older partition changes')
-            return
-        # update partition table in memory and the database
-        app.pt.update(ptid, cell_list, app.nm)
-        app.dm.changePartitionTable(ptid, cell_list)
-
-    def startOperation(self, conn, backup):
-        self.app.operational = True
-        dm = self.app.dm
-        if backup:
-            if dm.getBackupTID():
-                return
-            tid = dm.getLastIDs()[0] or ZERO_TID
-        else:
-            tid = None
-        dm.setBackupTID(tid)
-
-    def stopOperation(self, conn):
-        raise OperationFailure('operation stopped')
-
-    def askUnfinishedTransactions(self, conn):
-        tid_list = self.app.dm.getUnfinishedTIDList()
-        conn.answer(Packets.AnswerUnfinishedTransactions(INVALID_TID, tid_list))
-
-    def askTransactionInformation(self, conn, tid):
-        app = self.app
-        t = app.dm.getTransaction(tid, all=True)
-        if t is None:
-            p = Errors.TidNotFound('%s does not exist' % dump(tid))
-        else:
-            p = Packets.AnswerTransactionInformation(tid, t[1], t[2], t[3],
-                    t[4], t[0])
-        conn.answer(p)
-
-    def askObjectPresent(self, conn, oid, tid):
-        if self.app.dm.objectPresent(oid, tid):
-            p = Packets.AnswerObjectPresent(oid, tid)
-        else:
-            p = Errors.OidNotFound(
-                          '%s:%s do not exist' % (dump(oid), dump(tid)))
-        conn.answer(p)
-
-    def deleteTransaction(self, conn, tid, oid_list):
-        self.app.dm.deleteTransaction(tid, oid_list)
-
-    def commitTransaction(self, conn, tid):
-        self.app.dm.finishTransaction(tid)
-

neo/storage/replicator.py

@@ -128,7 +128,8 @@ class Replicator(object):
         if tid:
             new_tid = self.getBackupTID()
             if tid != new_tid:
-                dm.setBackupTID(new_tid)
+                dm._setBackupTID(new_tid)
+                dm.commit()
 
     def populate(self):
         app = self.app

neo/storage/transactions.py

@@ -38,18 +38,22 @@ class DelayedError(Exception):
         Raised when an object is locked by a previous transaction
     """
 
+class NotRegisteredError(Exception):
+    """
+        Raised when a ttid is not registered
+    """
 
 class Transaction(object):
     """
         Container for a pending transaction
     """
     _tid = None
+    has_trans = False
 
     def __init__(self, uuid, ttid):
         self._uuid = uuid
         self._ttid = ttid
         self._object_dict = {}
-        self._transaction = None
         self._locked = False
         self._birth = time()
         self._checked_set = set()
@@ -89,13 +93,6 @@ class Transaction(object):
     def isLocked(self):
         return self._locked
 
-    def prepare(self, oid_list, user, desc, ext, packed):
-        """
-            Set the transaction informations
-        """
-        # assert self._transaction is not None
-        self._transaction = oid_list, user, desc, ext, packed, self._ttid
-
     def addObject(self, oid, data_id, value_serial):
         """
             Add an object to the transaction
@@ -121,9 +118,6 @@ class Transaction(object):
     def getLockedOIDList(self):
         return self._object_dict.keys() + list(self._checked_set)
 
-    def getTransactionInformations(self):
-        return self._transaction
-
 
 class TransactionManager(object):
     """
@@ -137,12 +131,6 @@ class TransactionManager(object):
         self._load_lock_dict = {}
         self._uuid_dict = {}
 
-    def __contains__(self, ttid):
-        """
-            Returns True if the TID is known by the manager
-        """
-        return ttid in self._transaction_dict
-
     def register(self, uuid, ttid):
         """
             Register a transaction, it may be already registered
@@ -174,7 +162,21 @@ class TransactionManager(object):
         self._load_lock_dict.clear()
         self._uuid_dict.clear()
 
-    def lock(self, ttid, tid, oid_list):
+    def vote(self, ttid, txn_info=None):
+        """
+            Store transaction information received from client node
+        """
+        logging.debug('Vote TXN %s', dump(ttid))
+        transaction = self._transaction_dict[ttid]
+        object_list = transaction.getObjectList()
+        if txn_info:
+            user, desc, ext, oid_list = txn_info
+            txn_info = oid_list, user, desc, ext, False, ttid
+            transaction.has_trans = True
+        # store metadata to temporary table
+        self._app.dm.storeTransaction(ttid, object_list, txn_info)
+
+    def lock(self, ttid, tid):
         """
             Lock a transaction
         """
@@ -182,43 +184,22 @@ class TransactionManager(object):
         transaction = self._transaction_dict[ttid]
         # remember that the transaction has been locked
         transaction.lock()
-        for oid in transaction.getOIDList():
-            self._load_lock_dict[oid] = ttid
-        # check every object that should be locked
-        uuid = transaction.getUUID()
-        is_assigned = self._app.pt.isAssigned
-        for oid in oid_list:
-            if is_assigned(oid, uuid) and \
-                    self._load_lock_dict.get(oid) != ttid:
-                raise ValueError, 'Some locks are not held'
-        object_list = transaction.getObjectList()
-        # txn_info is None is the transaction information is not stored on
-        # this storage.
-        txn_info = transaction.getTransactionInformations()
-        # store data from memory to temporary table
-        self._app.dm.storeTransaction(tid, object_list, txn_info)
-        # ...and remember its definitive TID
+        self._load_lock_dict.update(
+            dict.fromkeys(transaction.getOIDList(), ttid))
+        # commit transaction and remember its definitive TID
+        if transaction.has_trans:
+            self._app.dm.lockTransaction(tid, ttid)
         transaction.setTID(tid)
 
-    def getTIDFromTTID(self, ttid):
-        return self._transaction_dict[ttid].getTID()
-
     def unlock(self, ttid):
         """
             Unlock transaction
         """
-        logging.debug('Unlock TXN %s', dump(ttid))
-        self._app.dm.finishTransaction(self.getTIDFromTTID(ttid))
+        tid = self._transaction_dict[ttid].getTID()
+        logging.debug('Unlock TXN %s (ttid=%s)', dump(tid), dump(ttid))
+        self._app.dm.unlockTransaction(tid, ttid)
         self.abort(ttid, even_if_locked=True)
 
-    def storeTransaction(self, ttid, oid_list, user, desc, ext, packed):
-        """
-            Store transaction information received from client node
-        """
-        assert ttid in self, "Transaction not registered"
-        transaction = self._transaction_dict[ttid]
-        transaction.prepare(oid_list, user, desc, ext, packed)
-
     def getLockingTID(self, oid):
         return self._store_lock_dict.get(oid)
 
@@ -283,9 +264,11 @@ class TransactionManager(object):
         self._store_lock_dict[oid] = ttid
 
     def checkCurrentSerial(self, ttid, serial, oid):
-        self.lockObject(ttid, serial, oid, unlock=True)
-        assert ttid in self, "Transaction not registered"
+        try:
             transaction = self._transaction_dict[ttid]
+        except KeyError:
+            raise NotRegisteredError
+        self.lockObject(ttid, serial, oid, unlock=True)
         transaction.addCheckedObject(oid)
 
     def storeObject(self, ttid, serial, oid, compression, checksum, data,
@@ -293,14 +276,17 @@ class TransactionManager(object):
         """
             Store an object received from client node
         """
+        try:
+            transaction = self._transaction_dict[ttid]
+        except KeyError:
+            raise NotRegisteredError
         self.lockObject(ttid, serial, oid, unlock=unlock)
         # store object
-        assert ttid in self, "Transaction not registered"
         if data is None:
             data_id = None
         else:
             data_id = self._app.dm.holdData(checksum, data, compression)
-        self._transaction_dict[ttid].addObject(oid, data_id, value_serial)
+        transaction.addObject(oid, data_id, value_serial)
 
     def abort(self, ttid, even_if_locked=False):
         """
@@ -322,9 +308,7 @@ class TransactionManager(object):
             if not even_if_locked:
                 return
         else:
-            self._app.dm.releaseData([data_id
-                for oid, data_id, value_serial in transaction.getObjectList()
-                if data_id], True)
+            self._app.dm.abortTransaction(ttid)
         # unlock any object
         for oid in transaction.getLockedOIDList():
             if has_load_lock:

neo/tests/__init__.py

@@ -463,9 +463,6 @@ class NeoUnitTestBase(NeoTestBase):
     def checkAskTransactionInformation(self, conn, **kw):
         return self.checkAskPacket(conn, Packets.AskTransactionInformation, **kw)
 
-    def checkAskObjectPresent(self, conn, **kw):
-        return self.checkAskPacket(conn, Packets.AskObjectPresent, **kw)
-
     def checkAskObject(self, conn, **kw):
         return self.checkAskPacket(conn, Packets.AskObject, **kw)
 
@@ -514,18 +511,12 @@ class NeoUnitTestBase(NeoTestBase):
     def checkAnswerObjectHistory(self, conn, **kw):
         return self.checkAnswerPacket(conn, Packets.AnswerObjectHistory, **kw)
 
-    def checkAnswerStoreTransaction(self, conn, **kw):
-        return self.checkAnswerPacket(conn, Packets.AnswerStoreTransaction, **kw)
-
     def checkAnswerStoreObject(self, conn, **kw):
         return self.checkAnswerPacket(conn, Packets.AnswerStoreObject, **kw)
 
     def checkAnswerPartitionTable(self, conn, **kw):
         return self.checkAnswerPacket(conn, Packets.AnswerPartitionTable, **kw)
 
-    def checkAnswerObjectPresent(self, conn, **kw):
-        return self.checkAnswerPacket(conn, Packets.AnswerObjectPresent, **kw)
-
 
 class Patch(object):
 

neo/tests/functional/testCluster.py

@@ -77,7 +77,7 @@ class ClusterTests(NEOFunctionalTest):
         self.neo.expectClusterRunning()
         self.neo.expectOudatedCells(number=0)
         self.neo.killStorage()
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
 
     def testClusterBreaksWithTwoNodes(self):
         self.neo = NEOCluster(['test_neo1', 'test_neo2'],
@@ -88,7 +88,7 @@ class ClusterTests(NEOFunctionalTest):
         self.neo.expectClusterRunning()
         self.neo.expectOudatedCells(number=0)
         self.neo.killStorage()
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
 
     def testClusterDoesntBreakWithTwoNodesOneReplica(self):
         self.neo = NEOCluster(['test_neo1', 'test_neo2'],
@@ -127,7 +127,7 @@ class ClusterTests(NEOFunctionalTest):
         self.assertEqual(len(self.neo.getClientlist()), 1)
         # drop the storage, the cluster is no more operational...
         self.neo.getStorageProcessList()[0].stop()
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
         # ...and the client gets disconnected
         self.assertEqual(len(self.neo.getClientlist()), 0)
         # restart storage so that the cluster is operational again

neo/tests/functional/testStorage.py

@@ -179,7 +179,7 @@ class StorageTests(NEOFunctionalTest):
         # Cluster not operational anymore. Only cells of second storage that
         # were shared with the third one should become outdated.
         self.neo.expectUnavailable(started[1])
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
         self.neo.expectOudatedCells(3)
 
     def testVerificationTriggered(self):
@@ -200,7 +200,7 @@ class StorageTests(NEOFunctionalTest):
         # stop it, the cluster must switch to verification
         started[0].stop()
         self.neo.expectUnavailable(started[0])
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
         # client must have been disconnected
         self.assertEqual(len(self.neo.getClientlist()), 0)
         conn.close()
@@ -245,7 +245,7 @@ class StorageTests(NEOFunctionalTest):
         self.neo.expectUnavailable(started[1])
         self.neo.expectUnavailable(started[2])
         self.neo.expectOudatedCells(number=20)
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
 
     def testConflictingStorageRejected(self):
         """ Check that a storage coming after the recovery process with the same
@@ -403,7 +403,7 @@ class StorageTests(NEOFunctionalTest):
         self.neo.expectUnavailable(started[0])
         self.neo.expectUnavailable(started[1])
         self.neo.expectOudatedCells(number=10)
-        self.neo.expectClusterVerifying()
+        self.neo.expectClusterRecovering()
         # XXX: need to sync with storages first
         self.neo.stop()
 

neo/tests/master/testRecovery.py

@@ -67,29 +67,6 @@ class MasterRecoveryTests(NeoUnitTestBase):
         self.assertEqual(self.app.nm.getByAddress(conn.getAddress()).getState(),
                 NodeStates.TEMPORARILY_DOWN)
 
-    def test_09_answerLastIDs(self):
-        recovery = self.recovery
-        uuid = self.identifyToMasterNode()
-        oid1 = self.getOID(1)
-        oid2 = self.getOID(2)
-        tid1 = self.getNextTID()
-        tid2 = self.getNextTID(tid1)
-        ptid1 = self.getPTID(1)
-        ptid2 = self.getPTID(2)
-        self.app.tm.setLastOID(oid1)
-        self.app.tm.setLastTID(tid1)
-        self.app.pt.setID(ptid1)
-        # send information which are later to what PMN knows, this must update target node
-        conn = self.getFakeConnection(uuid, self.storage_port)
-        self.assertTrue(ptid2 > self.app.pt.getID())
-        self.assertTrue(oid2 > self.app.tm.getLastOID())
-        self.assertTrue(tid2 > self.app.tm.getLastTID())
-        recovery.answerLastIDs(conn, oid2, tid2, ptid2, None)
-        self.assertEqual(oid2, self.app.tm.getLastOID())
-        self.assertEqual(tid2, self.app.tm.getLastTID())
-        self.assertEqual(ptid2, recovery.target_ptid)
-
-
     def test_10_answerPartitionTable(self):
         recovery = self.recovery
         uuid = self.identifyToMasterNode(NodeTypes.MASTER, port=self.master_port)

neo/tests/master/testStorageHandler.py

@@ -21,7 +21,7 @@ from neo.lib.protocol import NodeTypes, NodeStates, Packets
 from neo.master.handlers.storage import StorageServiceHandler
 from neo.master.handlers.client import ClientServiceHandler
 from neo.master.app import Application
-from neo.lib.exception import OperationFailure
+from neo.lib.exception import StoppedOperation
 
 class MasterStorageHandlerTests(NeoUnitTestBase):
 
@@ -114,24 +114,6 @@ class MasterStorageHandlerTests(NeoUnitTestBase):
         self.checkNotifyUnlockInformation(storage_conn_1)
         self.checkNotifyUnlockInformation(storage_conn_2)
 
-    def test_12_askLastIDs(self):
-        service = self.service
-        node, conn = self.identifyToMasterNode()
-        # give a uuid
-        conn = self.getFakeConnection(node.getUUID(), self.storage_address)
-        ptid = self.app.pt.getID()
-        oid = self.getOID(1)
-        tid = self.getNextTID()
-        self.app.tm.setLastOID(oid)
-        self.app.tm.setLastTID(tid)
-        service.askLastIDs(conn)
-        packet = self.checkAnswerLastIDs(conn)
-        loid, ltid, lptid, backup_tid = packet.decode()
-        self.assertEqual(loid, oid)
-        self.assertEqual(ltid, tid)
-        self.assertEqual(lptid, ptid)
-        self.assertEqual(backup_tid, None)
-
     def test_13_askUnfinishedTransactions(self):
         service = self.service
         node, conn = self.identifyToMasterNode()
@@ -173,64 +155,10 @@ class MasterStorageHandlerTests(NeoUnitTestBase):
         # drop the second, no storage node left
         lptid = self.app.pt.getID()
         self.assertEqual(node2.getState(), NodeStates.RUNNING)
-        self.assertRaises(OperationFailure, method, conn2)
+        self.assertRaises(StoppedOperation, method, conn2)
         self.assertEqual(node2.getState(), state)
         self.assertEqual(lptid, self.app.pt.getID())
 
-    def test_nodeLostAfterAskLockInformation(self):
-        # 2 storage nodes, one will die
-        node1, conn1 = self._getStorage()
-        node2, conn2 = self._getStorage()
-        # client nodes, to distinguish answers for the sample transactions
-        client1, cconn1 = self._getClient()
-        client2, cconn2 = self._getClient()
-        client3, cconn3 = self._getClient()
-        oid_list = [self.getOID(), ]
-
-        # Some shortcuts to simplify test code
-        self.app.pt = Mock({'operational': True})
-
-        # Register some transactions
-        tm = self.app.tm
-        # Transaction 1: 2 storage nodes involved, one will die and the other
-        # already answered node lock
-        msg_id_1 = 1
-        ttid1 = tm.begin(client1)
-        tid1 = tm.prepare(ttid1, 1, oid_list,
-            [node1.getUUID(), node2.getUUID()], msg_id_1)
-        tm.lock(ttid1, node2.getUUID())
-        # storage 1 request a notification at commit
-        tm. registerForNotification(node1.getUUID())
-        self.checkNoPacketSent(cconn1)
-        # Storage 1 dies
-        node1.setTemporarilyDown()
-        self.service.nodeLost(conn1, node1)
-        # T1: last locking node lost, client receives AnswerTransactionFinished
-        self.checkAnswerTransactionFinished(cconn1)
-        self.checkNotifyTransactionFinished(conn1)
-        self.checkNotifyUnlockInformation(conn2)
-        # ...and notifications are sent to other clients
-        self.checkInvalidateObjects(cconn2)
-        self.checkInvalidateObjects(cconn3)
-
-        # Transaction 2: 2 storage nodes involved, one will die
-        msg_id_2 = 2
-        ttid2 = tm.begin(node1)
-        tid2 = tm.prepare(ttid2, 1, oid_list,
-            [node1.getUUID(), node2.getUUID()], msg_id_2)
-        # T2: pending locking answer, client keeps waiting
-        self.checkNoPacketSent(cconn2, check_notify=False)
-        tm.remove(node1.getUUID(), ttid2)
-
-        # Transaction 3: 1 storage node involved, which won't die
-        msg_id_3 = 3
-        ttid3 = tm.begin(node1)
-        tid3 = tm.prepare(ttid3, 1, oid_list,
-            [node2.getUUID(), ], msg_id_3)
-        # T3: action not significant to this transacion, so no response
-        self.checkNoPacketSent(cconn3, check_notify=False)
-        tm.remove(node1.getUUID(), ttid3)
-
     def test_answerPack(self):
         # Note: incomming status has no meaning here, so it's left to False.
         node1, conn1 = self._getStorage()

neo/tests/master/testTransactions.py

@@ -112,19 +112,6 @@ class testTransactionManager(NeoUnitTestBase):
         # ...and the lock is available
         txnman.begin(client, self.getNextTID())
 
-    def test_getNextOIDList(self):
-        txnman = TransactionManager(lambda tid, txn: None)
-        # must raise as we don"t have one
-        self.assertEqual(txnman.getLastOID(), None)
-        self.assertRaises(RuntimeError, txnman.getNextOIDList, 1)
-        # ask list
-        txnman.setLastOID(self.getOID(1))
-        oid_list = txnman.getNextOIDList(15)
-        self.assertEqual(len(oid_list), 15)
-        # begin from 1, so generated oid from 2 to 16
-        for i, oid in zip(xrange(len(oid_list)), oid_list):
-            self.assertEqual(oid, self.getOID(i+2))
-
     def test_forget(self):
         client1 = Mock({'__hash__': 1})
         client2 = Mock({'__hash__': 2})

neo/tests/storage/testClientHandler.py

@@ -191,18 +191,6 @@ class StorageClientHandlerTests(NeoUnitTestBase):
         self.operation.askObjectHistory(conn, oid2, 1, 2)
         self.checkAnswerObjectHistory(conn)
 
-    def test_askStoreTransaction(self):
-        conn = self._getConnection(uuid=self.getClientUUID())
-        tid = self.getNextTID()
-        user = 'USER'
-        desc = 'DESC'
-        ext = 'EXT'
-        oid_list = (self.getOID(1), self.getOID(2))
-        self.operation.askStoreTransaction(conn, tid, user, desc, ext, oid_list)
-        calls = self.app.tm.mockGetNamedCalls('storeTransaction')
-        self.assertEqual(len(calls), 1)
-        self.checkAnswerStoreTransaction(conn)
-
     def _getObject(self):
         oid = self.getOID(0)
         serial = self.getNextTID()

neo/tests/storage/testInitializationHandler.py

@@ -76,7 +76,7 @@ class StorageInitializationHandlerTests(NeoUnitTestBase):
                     (2, ((node_2, CellStates.UP_TO_DATE), (node_3, CellStates.UP_TO_DATE)))]
         self.assertFalse(self.app.pt.filled())
         # send a complete new table and ack
-        self.verification.answerPartitionTable(conn, 2, row_list)
+        self.verification.sendPartitionTable(conn, 2, row_list)
         self.assertTrue(self.app.pt.filled())
         self.assertEqual(self.app.pt.getID(), 2)
         self.assertTrue(list(self.app.dm.getPartitionTable()))

neo/tests/storage/testMasterHandler.py

@@ -20,7 +20,7 @@ from collections import deque
 from .. import NeoUnitTestBase
 from neo.storage.app import Application
 from neo.storage.handlers.master import MasterOperationHandler
-from neo.lib.exception import PrimaryFailure, OperationFailure
+from neo.lib.exception import PrimaryFailure
 from neo.lib.pt import PartitionTable
 from neo.lib.protocol import CellStates, ProtocolError, Packets
 
@@ -104,58 +104,9 @@ class StorageMasterHandlerTests(NeoUnitTestBase):
         self.assertEqual(len(calls), 1)
         calls[0].checkArgs(ptid2, cells)
 
-    def test_16_stopOperation1(self):
-        # OperationFailure
-        conn = self.getFakeConnection(is_server=False)
-        self.assertRaises(OperationFailure, self.operation.stopOperation, conn)
-
     def _getConnection(self):
         return self.getFakeConnection()
 
-    def test_askLockInformation1(self):
-        """ Unknown transaction """
-        self.app.tm = Mock({'__contains__': False})
-        conn = self._getConnection()
-        oid_list = [self.getOID(1), self.getOID(2)]
-        tid = self.getNextTID()
-        ttid = self.getNextTID()
-        handler = self.operation
-        self.assertRaises(ProtocolError, handler.askLockInformation, conn,
-            ttid, tid, oid_list)
-
-    def test_askLockInformation2(self):
-        """ Lock transaction """
-        self.app.tm = Mock({'__contains__': True})
-        conn = self._getConnection()
-        tid = self.getNextTID()
-        ttid = self.getNextTID()
-        oid_list = [self.getOID(1), self.getOID(2)]
-        self.operation.askLockInformation(conn, ttid, tid, oid_list)
-        calls = self.app.tm.mockGetNamedCalls('lock')
-        self.assertEqual(len(calls), 1)
-        calls[0].checkArgs(ttid, tid, oid_list)
-        self.checkAnswerInformationLocked(conn)
-
-    def test_notifyUnlockInformation1(self):
-        """ Unknown transaction """
-        self.app.tm = Mock({'__contains__': False})
-        conn = self._getConnection()
-        tid = self.getNextTID()
-        handler = self.operation
-        self.assertRaises(ProtocolError, handler.notifyUnlockInformation,
-                conn, tid)
-
-    def test_notifyUnlockInformation2(self):
-        """ Unlock transaction """
-        self.app.tm = Mock({'__contains__': True})
-        conn = self._getConnection()
-        tid = self.getNextTID()
-        self.operation.notifyUnlockInformation(conn, tid)
-        calls = self.app.tm.mockGetNamedCalls('unlock')
-        self.assertEqual(len(calls), 1)
-        calls[0].checkArgs(tid)
-        self.checkNoPacketSent(conn)
-
     def test_askPack(self):
         self.app.dm = Mock({'pack': None})
         conn = self.getFakeConnection()

neo/tests/storage/testVerificationHandler.py

-#
-# Copyright (C) 2009-2015  Nexedi SA
-#
-# This program is free software; you can redistribute it and/or
-# modify it under the terms of the GNU General Public License
-# as published by the Free Software Foundation; either version 2
-# of the License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with this program.  If not, see <http://www.gnu.org/licenses/>.
-
-import unittest
-from mock import Mock
-from .. import NeoUnitTestBase
-from neo.lib.pt import PartitionTable
-from neo.storage.app import Application
-from neo.storage.handlers.verification import VerificationHandler
-from neo.lib.protocol import CellStates, ErrorCodes
-from neo.lib.exception import PrimaryFailure
-from neo.lib.util import p64, u64
-
-class StorageVerificationHandlerTests(NeoUnitTestBase):
-
-    def setUp(self):
-        NeoUnitTestBase.setUp(self)
-        self.prepareDatabase(number=1)
-        # create an application object
-        config = self.getStorageConfiguration(master_number=1)
-        self.app = Application(config)
-        self.verification = VerificationHandler(self.app)
-        # define some variable to simulate client and storage node
-        self.master_port = 10010
-        self.storage_port = 10020
-        self.client_port = 11011
-        self.num_partitions = 1009
-        self.num_replicas = 2
-        self.app.operational = False
-        self.app.load_lock_dict = {}
-        self.app.pt = PartitionTable(self.num_partitions, self.num_replicas)
-
-    def _tearDown(self, success):
-        self.app.close()
-        del self.app
-        super(StorageVerificationHandlerTests, self)._tearDown(success)
-
-    # Common methods
-    def getMasterConnection(self):
-        return self.getFakeConnection(address=("127.0.0.1", self.master_port))
-
-    # Tests
-    def test_03_connectionClosed(self):
-        conn = self.getMasterConnection()
-        self.app.listening_conn = object() # mark as running
-        self.assertRaises(PrimaryFailure, self.verification.connectionClosed, conn,)
-        # nothing happens
-        self.checkNoPacketSent(conn)
-
-    def test_08_askPartitionTable(self):
-        node = self.app.nm.createStorage(
-            address=("127.7.9.9", 1),
-            uuid=self.getStorageUUID()
-        )
-        self.app.pt.setCell(1, node, CellStates.UP_TO_DATE)
-        self.assertTrue(self.app.pt.hasOffset(1))
-        conn = self.getMasterConnection()
-        self.verification.askPartitionTable(conn)
-        ptid, row_list = self.checkAnswerPartitionTable(conn, decode=True)
-        self.assertEqual(len(row_list), 1009)
-
-    def test_10_notifyPartitionChanges(self):
-        # old partition change
-        conn = self.getMasterConnection()
-        self.verification.notifyPartitionChanges(conn, 1, ())
-        self.verification.notifyPartitionChanges(conn, 0, ())
-        self.assertEqual(self.app.pt.getID(), 1)
-
-        # new node
-        conn = self.getMasterConnection()
-        new_uuid = self.getStorageUUID()
-        cell = (0, new_uuid, CellStates.UP_TO_DATE)
-        self.app.nm.createStorage(uuid=new_uuid)
-        self.app.pt = PartitionTable(1, 1)
-        self.app.dm = Mock({ })
-        ptid = self.getPTID()
-        # pt updated
-        self.verification.notifyPartitionChanges(conn, ptid, (cell, ))
-        # check db update
-        calls = self.app.dm.mockGetNamedCalls('changePartitionTable')
-        self.assertEqual(len(calls), 1)
-        self.assertEqual(calls[0].getParam(0), ptid)
-        self.assertEqual(calls[0].getParam(1), (cell, ))
-
-    def test_13_askUnfinishedTransactions(self):
-        # client connection with no data
-        self.app.dm = Mock({
-            'getUnfinishedTIDList': [],
-        })
-        conn = self.getMasterConnection()
-        self.verification.askUnfinishedTransactions(conn)
-        (max_tid, tid_list) = self.checkAnswerUnfinishedTransactions(conn, decode=True)
-        self.assertEqual(len(tid_list), 0)
-        call_list = self.app.dm.mockGetNamedCalls('getUnfinishedTIDList')
-        self.assertEqual(len(call_list), 1)
-        call_list[0].checkArgs()
-
-        # client connection with some data
-        self.app.dm = Mock({
-            'getUnfinishedTIDList': [p64(4)],
-        })
-        conn = self.getMasterConnection()
-        self.verification.askUnfinishedTransactions(conn)
-        (max_tid, tid_list) = self.checkAnswerUnfinishedTransactions(conn, decode=True)
-        self.assertEqual(len(tid_list), 1)
-        self.assertEqual(u64(tid_list[0]), 4)
-
-    def test_14_askTransactionInformation(self):
-        # ask from client conn with no data
-        self.app.dm = Mock({
-            'getTransaction': None,
-        })
-        conn = self.getMasterConnection()
-        tid = p64(1)
-        self.verification.askTransactionInformation(conn, tid)
-        code, message = self.checkErrorPacket(conn, decode=True)
-        self.assertEqual(code, ErrorCodes.TID_NOT_FOUND)
-        call_list = self.app.dm.mockGetNamedCalls('getTransaction')
-        self.assertEqual(len(call_list), 1)
-        call_list[0].checkArgs(tid, all=True)
-
-        # input some tmp data and ask from client, must find both transaction
-        self.app.dm = Mock({
-            'getTransaction': ([p64(2)], 'u2', 'd2', 'e2', False),
-        })
-        conn = self.getMasterConnection()
-        self.verification.askTransactionInformation(conn, p64(1))
-        tid, user, desc, ext, packed, oid_list = self.checkAnswerTransactionInformation(conn, decode=True)
-        self.assertEqual(u64(tid), 1)
-        self.assertEqual(user, 'u2')
-        self.assertEqual(desc, 'd2')
-        self.assertEqual(ext, 'e2')
-        self.assertFalse(packed)
-        self.assertEqual(len(oid_list), 1)
-        self.assertEqual(u64(oid_list[0]), 2)
-
-    def test_15_askObjectPresent(self):
-        # client connection with no data
-        self.app.dm = Mock({
-            'objectPresent': False,
-        })
-        conn = self.getMasterConnection()
-        oid, tid = p64(1), p64(2)
-        self.verification.askObjectPresent(conn, oid, tid)
-        code, message = self.checkErrorPacket(conn, decode=True)
-        self.assertEqual(code, ErrorCodes.OID_NOT_FOUND)
-        call_list = self.app.dm.mockGetNamedCalls('objectPresent')
-        self.assertEqual(len(call_list), 1)
-        call_list[0].checkArgs(oid, tid)
-
-        # client connection with some data
-        self.app.dm = Mock({
-            'objectPresent': True,
-        })
-        conn = self.getMasterConnection()
-        self.verification.askObjectPresent(conn, oid, tid)
-        oid, tid = self.checkAnswerObjectPresent(conn, decode=True)
-        self.assertEqual(u64(tid), 2)
-        self.assertEqual(u64(oid), 1)
-
-    def test_16_deleteTransaction(self):
-        # client connection with no data
-        self.app.dm = Mock({
-            'deleteTransaction': None,
-        })
-        conn = self.getMasterConnection()
-        oid_list = [self.getOID(1), self.getOID(2)]
-        tid = p64(1)
-        self.verification.deleteTransaction(conn, tid, oid_list)
-        call_list = self.app.dm.mockGetNamedCalls('deleteTransaction')
-        self.assertEqual(len(call_list), 1)
-        call_list[0].checkArgs(tid, oid_list)
-
-    def test_17_commitTransaction(self):
-        # commit a transaction
-        conn = self.getMasterConnection()
-        dm = Mock()
-        self.app.dm = dm
-        self.verification.commitTransaction(conn, p64(1))
-        self.assertEqual(len(dm.mockGetNamedCalls("finishTransaction")), 1)
-        call = dm.mockGetNamedCalls("finishTransaction")[0]
-        tid = call.getParam(0)
-        self.assertEqual(u64(tid), 1)
-
-if __name__ == "__main__":
-    unittest.main()
-

neo/tests/threaded/__init__.py

@@ -33,7 +33,7 @@ from neo.lib import logging
 from neo.lib.connection import BaseConnection, Connection
 from neo.lib.connector import SocketConnector, ConnectorException
 from neo.lib.locking import SimpleQueue
-from neo.lib.protocol import CellStates, ClusterStates, NodeStates, NodeTypes
+from neo.lib.protocol import ClusterStates, NodeStates, NodeTypes
 from neo.lib.util import cached_property, parseMasterList, p64
 from .. import NeoTestBase, Patch, getTempDirectory, setupMySQLdb, \
     ADDRESS_TYPE, IP_VERSION_FORMAT_DICT, DB_PREFIX, DB_USER
@@ -478,6 +478,8 @@ class ConnectionFilter(object):
                         queue.appendleft(packet)
                         break
                 else:
+                    if conn.isClosed():
+                        return
                     cls._addPacket(conn, packet)
                     continue
                 break
@@ -731,9 +733,12 @@ class NEOCluster(object):
                 return node[3]
 
     def getOutdatedCells(self):
-        return [cell for row in self.neoctl.getPartitionRowList()[1]
-                     for cell in row[1]
-                     if cell[1] == CellStates.OUT_OF_DATE]
+        # Ask the admin instead of the primary master to check that it is
+        # notified of every change.
+        return [(i, cell.getUUID())
+            for i, row in enumerate(self.admin.pt.partition_list)
+            for cell in row
+            if not cell.isReadable()]
 
     def getZODBStorage(self, **kw):
         kw['_app'] = kw.pop('client', self.client)

neo/tests/threaded/testReplication.py

@@ -424,7 +424,7 @@ class ReplicationTests(NEOThreadedTest):
             check(ClusterStates.RUNNING, 1)
             cluster.neoctl.checkReplicas(check_dict, ZERO_TID, None)
             self.tic()
-            check(ClusterStates.VERIFYING, 4)
+            check(ClusterStates.RECOVERING, 4)
         finally:
             checker.CHECK_COUNT = CHECK_COUNT
             cluster.stop()