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software/theia/test: fix a flaky test
This test checks that running `slapos node software` command on theia
shell starts installing software, but this command might get an error
like:
process started, but another slapos process is aleady running with pid 2656158, exiting
this happened for example with https://erp5js.nexedi.net/#/test_result_module/20240911-ED8B4BF9/60