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Boxiang Sun
cython
Commits
d88146d0
Commit
d88146d0
authored
Jan 25, 2012
by
Mark Florisson
Browse files
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Merge cython array utility with memoryview utility
parent
23d7640e
Changes
5
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Showing
5 changed files
with
101 additions
and
129 deletions
+101
-129
Cython/Compiler/CythonScope.py
Cython/Compiler/CythonScope.py
+3
-7
Cython/Compiler/MemoryView.py
Cython/Compiler/MemoryView.py
+8
-15
Cython/Utility/MemoryView.pyx
Cython/Utility/MemoryView.pyx
+82
-105
tests/run/cymemoryview.pyx
tests/run/cymemoryview.pyx
+4
-1
tests/run/memoryview.pyx
tests/run/memoryview.pyx
+4
-1
No files found.
Cython/Compiler/CythonScope.py
View file @
d88146d0
...
@@ -103,9 +103,6 @@ class CythonScope(ModuleScope):
...
@@ -103,9 +103,6 @@ class CythonScope(ModuleScope):
cython_test_extclass_utility_code
.
declare_in_scope
(
cython_test_extclass_utility_code
.
declare_in_scope
(
self
,
cython_scope
=
self
)
self
,
cython_scope
=
self
)
MemoryView
.
cython_array_utility_code
.
declare_in_scope
(
self
,
cython_scope
=
self
)
#
#
# The view sub-scope
# The view sub-scope
#
#
...
@@ -115,13 +112,12 @@ class CythonScope(ModuleScope):
...
@@ -115,13 +112,12 @@ class CythonScope(ModuleScope):
viewscope
.
pxd_file_loaded
=
True
viewscope
.
pxd_file_loaded
=
True
cythonview_testscope_utility_code
.
declare_in_scope
(
cythonview_testscope_utility_code
.
declare_in_scope
(
viewscope
,
cython_scope
=
self
)
viewscope
,
cython_scope
=
self
)
view_utility_scope
=
MemoryView
.
view_utility_code
.
declare_in_scope
(
view_utility_scope
=
MemoryView
.
view_utility_code
.
declare_in_scope
(
viewscope
,
cython_scope
=
self
)
self
.
viewscope
,
cython_scope
=
self
)
# MemoryView.memview_fromslice_utility_code.from_scope = view_utility_scope
self
.
entries
[
"array"
]
=
view_utility_scope
.
lookup
(
"array"
)
# MemoryView.memview_fromslice_utility_code.declare_in_scope(viewscope)
def
create_cython_scope
(
context
):
def
create_cython_scope
(
context
):
...
...
Cython/Compiler/MemoryView.py
View file @
d88146d0
...
@@ -853,6 +853,10 @@ def _resolve_AttributeNode(env, node):
...
@@ -853,6 +853,10 @@ def _resolve_AttributeNode(env, node):
return
entry
return
entry
#
### Utility loading
#
def
load_memview_cy_utility
(
util_code_name
,
context
=
None
,
**
kwargs
):
def
load_memview_cy_utility
(
util_code_name
,
context
=
None
,
**
kwargs
):
return
CythonUtilityCode
.
load
(
util_code_name
,
"MemoryView.pyx"
,
return
CythonUtilityCode
.
load
(
util_code_name
,
"MemoryView.pyx"
,
context
=
context
,
**
kwargs
)
context
=
context
,
**
kwargs
)
...
@@ -865,9 +869,9 @@ def load_memview_c_utility(util_code_name, context=None, **kwargs):
...
@@ -865,9 +869,9 @@ def load_memview_c_utility(util_code_name, context=None, **kwargs):
context
=
context
,
**
kwargs
)
context
=
context
,
**
kwargs
)
def
use_cython_array_utility_code
(
env
):
def
use_cython_array_utility_code
(
env
):
scope
=
env
.
global_scope
().
context
.
cython_scope
cython_
scope
=
env
.
global_scope
().
context
.
cython_scope
scope
.
lookup
(
'array_cwrapper'
).
used
=
True
cython_scope
.
load_cythonscope
()
env
.
use_utility_code
(
cython_array_utility_code
)
cython_scope
.
viewscope
.
lookup
(
'array_cwrapper'
).
used
=
True
context
=
{
context
=
{
'memview_struct_name'
:
memview_objstruct_cname
,
'memview_struct_name'
:
memview_objstruct_cname
,
...
@@ -916,15 +920,4 @@ view_utility_code = load_memview_cy_utility(
...
@@ -916,15 +920,4 @@ view_utility_code = load_memview_cy_utility(
copy_contents_new_utility
],
copy_contents_new_utility
],
)
)
cython_array_utility_code
=
load_memview_cy_utility
(
copy_contents_new_utility
.
requires
.
append
(
view_utility_code
)
"CythonArray"
,
\ No newline at end of file
context
=
context
,
requires
=
[
view_utility_code
])
copy_contents_new_utility
.
requires
.
append
(
cython_array_utility_code
)
# memview_fromslice_utility_code = load_memview_cy_utility(
# "MemviewFromSlice",
# context=context,
# requires=[view_utility_code],
# )
Cython/Utility/MemoryView.pyx
View file @
d88146d0
##########
CythonArray
##########
##########
########## View.MemoryView ##########
##########
cdef
extern
from
"stdlib.h"
:
# This utility provides cython.array and cython.view.memoryview
void
*
malloc
(
size_t
)
void
free
(
void
*
)
import
cython
# from cpython cimport ...
cdef
extern
from
"Python.h"
:
cdef
extern
from
"Python.h"
:
int
PyIndex_Check
(
object
)
object
PyLong_FromVoidPtr
(
void
*
)
cdef
extern
from
"pythread.h"
:
ctypedef
void
*
PyThread_type_lock
PyThread_type_lock
PyThread_allocate_lock
()
void
PyThread_free_lock
(
PyThread_type_lock
)
int
PyThread_acquire_lock
(
PyThread_type_lock
,
int
mode
)
nogil
void
PyThread_release_lock
(
PyThread_type_lock
)
nogil
cdef
extern
from
"string.h"
:
void
*
memset
(
void
*
b
,
int
c
,
size_t
len
)
cdef
extern
from
*
:
int
__Pyx_GetBuffer
(
object
,
Py_buffer
*
,
int
)
except
-
1
void
__Pyx_ReleaseBuffer
(
Py_buffer
*
)
ctypedef
struct
PyObject
void
Py_INCREF
(
PyObject
*
)
void
Py_DECREF
(
PyObject
*
)
cdef
struct
__pyx_memoryview
"__pyx_memoryview_obj"
:
Py_buffer
view
PyObject
*
obj
ctypedef
struct
{{
memviewslice_name
}}:
__pyx_memoryview
*
memview
char
*
data
Py_ssize_t
shape
[{{
max_dims
}}]
Py_ssize_t
strides
[{{
max_dims
}}]
Py_ssize_t
suboffsets
[{{
max_dims
}}]
void
__PYX_INC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
void
__PYX_XDEC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
ctypedef
struct
__pyx_buffer
"Py_buffer"
:
PyObject
*
obj
PyObject
*
Py_None
cdef
enum
:
cdef
enum
:
PyBUF_C_CONTIGUOUS
,
PyBUF_C_CONTIGUOUS
,
...
@@ -12,22 +53,36 @@ cdef extern from "Python.h":
...
@@ -12,22 +53,36 @@ cdef extern from "Python.h":
PyBUF_ANY_CONTIGUOUS
PyBUF_ANY_CONTIGUOUS
PyBUF_FORMAT
PyBUF_FORMAT
PyBUF_WRITABLE
PyBUF_WRITABLE
PyBUF_STRIDES
PyBUF_INDIRECT
PyBUF_RECORDS
ctypedef
struct
PyObject
cdef
extern
from
*
:
PyObject
*
Py_None
ctypedef
int
__pyx_atomic_int
void
Py_INCREF
(
PyObject
*
)
{{
memviewslice_name
}}
slice_copy_contig
"__pyx_memoryview_copy_new_contig"
(
__Pyx_memviewslice
*
from_mvs
,
char
*
mode
,
int
ndim
,
size_t
sizeof_dtype
,
int
contig_flag
,
bint
dtype_is_object
)
nogil
except
*
bint
slice_is_contig
"__pyx_memviewslice_is_contig"
(
{{
memviewslice_name
}}
*
mvs
,
char
order
,
int
ndim
)
nogil
bint
slices_overlap
"__pyx_slices_overlap"
({{
memviewslice_name
}}
*
slice1
,
{{
memviewslice_name
}}
*
slice2
,
int
ndim
,
size_t
itemsize
)
nogil
cdef
extern
from
*
:
cdef
extern
from
"stdlib.h"
:
object
__pyx_memoryview_new
(
object
obj
,
int
flags
,
bint
dtype_is_object
)
void
*
malloc
(
size_t
)
nogil
Py_ssize_t
fill_contig_strides_array
"__pyx_fill_contig_strides_array"
(
void
free
(
void
*
)
nogil
Py_ssize_t
*
shape
,
Py_ssize_t
*
strides
,
Py_ssize_t
stride
,
void
*
memcpy
(
void
*
dest
,
void
*
src
,
size_t
n
)
nogil
int
ndim
,
char
order
)
nogil
cdef
void
refcount_objects_in_slice
"__pyx_memoryview_refcount_objects_in_slice"
(
char
*
data
,
Py_ssize_t
*
shape
,
Py_ssize_t
*
strides
,
int
ndim
,
bint
inc
)
#
### cython.array class
#
@
cname
(
"__pyx_array"
)
@
cname
(
"__pyx_array"
)
cdef
class
array
:
cdef
class
array
:
...
@@ -154,14 +209,9 @@ cdef class array:
...
@@ -154,14 +209,9 @@ cdef class array:
property
memview
:
property
memview
:
@
cname
(
'__pyx_cython_array_get_memview'
)
@
cname
(
'__pyx_cython_array_get_memview'
)
def
__get__
(
self
):
def
__get__
(
self
):
# Make this a property as 'data' may be set after instantiation
# Make this a property as 'self.data' may be set after instantiation
#if self._memview is None:
# flags = PyBUF_ANY_CONTIGUOUS|PyBUF_FORMAT|PyBUF_WRITABLE
# self._memview = __pyx_memoryview_new(self, flags)
#return self._memview
flags
=
PyBUF_ANY_CONTIGUOUS
|
PyBUF_FORMAT
|
PyBUF_WRITABLE
flags
=
PyBUF_ANY_CONTIGUOUS
|
PyBUF_FORMAT
|
PyBUF_WRITABLE
return
__pyx_memoryview_n
ew
(
self
,
flags
,
self
.
dtype_is_object
)
return
memoryvi
ew
(
self
,
flags
,
self
.
dtype_is_object
)
def
__getattr__
(
self
,
attr
):
def
__getattr__
(
self
,
attr
):
...
@@ -189,90 +239,9 @@ cdef array array_cwrapper(tuple shape, Py_ssize_t itemsize, char *format,
...
@@ -189,90 +239,9 @@ cdef array array_cwrapper(tuple shape, Py_ssize_t itemsize, char *format,
return
result
return
result
#################### View.MemoryView ####################
#
### Memoryview constants and cython.view.memoryview class
import
cython
#
# from cpython cimport ...
cdef
extern
from
"Python.h"
:
int
PyIndex_Check
(
object
)
object
PyLong_FromVoidPtr
(
void
*
)
cdef
extern
from
"pythread.h"
:
ctypedef
void
*
PyThread_type_lock
PyThread_type_lock
PyThread_allocate_lock
()
void
PyThread_free_lock
(
PyThread_type_lock
)
int
PyThread_acquire_lock
(
PyThread_type_lock
,
int
mode
)
nogil
void
PyThread_release_lock
(
PyThread_type_lock
)
nogil
cdef
extern
from
"string.h"
:
void
*
memset
(
void
*
b
,
int
c
,
size_t
len
)
cdef
extern
from
*
:
int
__Pyx_GetBuffer
(
object
,
Py_buffer
*
,
int
)
except
-
1
void
__Pyx_ReleaseBuffer
(
Py_buffer
*
)
ctypedef
struct
PyObject
void
Py_INCREF
(
PyObject
*
)
void
Py_DECREF
(
PyObject
*
)
cdef
struct
__pyx_memoryview
"__pyx_memoryview_obj"
:
Py_buffer
view
PyObject
*
obj
ctypedef
struct
{{
memviewslice_name
}}:
__pyx_memoryview
*
memview
char
*
data
Py_ssize_t
shape
[{{
max_dims
}}]
Py_ssize_t
strides
[{{
max_dims
}}]
Py_ssize_t
suboffsets
[{{
max_dims
}}]
void
__PYX_INC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
void
__PYX_XDEC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
ctypedef
struct
__pyx_buffer
"Py_buffer"
:
PyObject
*
obj
PyObject
*
Py_None
cdef
enum
:
PyBUF_C_CONTIGUOUS
,
PyBUF_F_CONTIGUOUS
,
PyBUF_ANY_CONTIGUOUS
PyBUF_FORMAT
PyBUF_WRITABLE
PyBUF_STRIDES
PyBUF_INDIRECT
PyBUF_RECORDS
cdef
extern
from
*
:
ctypedef
int
__pyx_atomic_int
{{
memviewslice_name
}}
slice_copy_contig
"__pyx_memoryview_copy_new_contig"
(
__Pyx_memviewslice
*
from_mvs
,
char
*
mode
,
int
ndim
,
size_t
sizeof_dtype
,
int
contig_flag
,
bint
dtype_is_object
)
nogil
except
*
bint
slice_is_contig
"__pyx_memviewslice_is_contig"
(
{{
memviewslice_name
}}
*
mvs
,
char
order
,
int
ndim
)
nogil
bint
slices_overlap
"__pyx_slices_overlap"
({{
memviewslice_name
}}
*
slice1
,
{{
memviewslice_name
}}
*
slice2
,
int
ndim
,
size_t
itemsize
)
nogil
cdef
extern
from
"stdlib.h"
:
void
*
malloc
(
size_t
)
nogil
void
free
(
void
*
)
nogil
void
*
memcpy
(
void
*
dest
,
void
*
src
,
size_t
n
)
nogil
@
cname
(
'__pyx_MemviewEnum'
)
cdef
class
Enum
(
object
):
cdef
object
name
def
__init__
(
self
,
name
):
self
.
name
=
name
def
__repr__
(
self
):
return
self
.
name
# Disable generic_contiguous, as it makes trouble verifying contiguity:
# Disable generic_contiguous, as it makes trouble verifying contiguity:
# - 'contiguous' or '::1' means the dimension is contiguous with dtype
# - 'contiguous' or '::1' means the dimension is contiguous with dtype
...
@@ -290,6 +259,14 @@ cdef class Enum(object):
...
@@ -290,6 +259,14 @@ cdef class Enum(object):
# would mean you'd have assert dimension 0 to be indirect (and pointer contiguous) at runtime.
# would mean you'd have assert dimension 0 to be indirect (and pointer contiguous) at runtime.
# So it doesn't bring any performance benefit, and it's only confusing.
# So it doesn't bring any performance benefit, and it's only confusing.
@
cname
(
'__pyx_MemviewEnum'
)
cdef
class
Enum
(
object
):
cdef
object
name
def
__init__
(
self
,
name
):
self
.
name
=
name
def
__repr__
(
self
):
return
self
.
name
cdef
generic
=
Enum
(
"<strided and direct or indirect>"
)
cdef
generic
=
Enum
(
"<strided and direct or indirect>"
)
cdef
strided
=
Enum
(
"<strided and direct>"
)
# default
cdef
strided
=
Enum
(
"<strided and direct>"
)
# default
cdef
indirect
=
Enum
(
"<strided and indirect>"
)
cdef
indirect
=
Enum
(
"<strided and indirect>"
)
...
...
tests/run/cymemoryview.pyx
View file @
d88146d0
...
@@ -6,7 +6,10 @@ u'''
...
@@ -6,7 +6,10 @@ u'''
'''
'''
# from cython.view cimport memoryview
# from cython.view cimport memoryview
from
cython
cimport
array
,
PyBUF_C_CONTIGUOUS
from
cython
cimport
array
cdef
extern
from
"Python.h"
:
cdef
int
PyBUF_C_CONTIGUOUS
def
f
():
def
f
():
pass
pass
...
...
tests/run/memoryview.pyx
View file @
d88146d0
...
@@ -8,9 +8,12 @@ u'''
...
@@ -8,9 +8,12 @@ u'''
'''
'''
from
cython.view
cimport
memoryview
from
cython.view
cimport
memoryview
from
cython
cimport
array
,
PyBUF_C_CONTIGUOUS
from
cython
cimport
array
from
cython
cimport
view
from
cython
cimport
view
cdef
extern
from
"Python.h"
:
cdef
int
PyBUF_C_CONTIGUOUS
include
"mockbuffers.pxi"
include
"mockbuffers.pxi"
#
#
...
...
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