Fix current feature related specs

app/finders/todos_finder.rb

@@ -78,11 +78,14 @@ class TodosFinder
   end
 
   def project
+    return nil if @project&.pending_delete?
     return @project if defined?(@project)
 
     if project?
       @project = Project.find(params[:project_id])
 
+      @project = nil if @project.pending_delete?
+
       unless Ability.allowed?(current_user, :read_project, @project)
         @project = nil
       end
@@ -95,7 +98,7 @@ class TodosFinder
 
   def projects(items)
     item_project_ids = items.reorder(nil).select(:project_id)
-    ProjectsFinder.new(current_user: current_user, project_ids_relation: item_project_ids).execute
+    ProjectsFinder.new(current_user: current_user, project_ids_relation: item_project_ids).execute.without_deleted
   end
 
   def type?

app/models/notification_setting.rb

@@ -19,7 +19,7 @@ class NotificationSetting < ActiveRecord::Base
   # pending delete).
   #
   scope :for_projects, -> do
-    includes(:project).references(:projects).where(source_type: 'Project').where.not(projects: { id: nil })
+    includes(:project).references(:projects).where(source_type: 'Project').where.not(projects: { id: nil, pending_delete: true })
   end
 
   EMAIL_EVENTS = [

app/models/project.rb

@@ -1456,7 +1456,7 @@ class Project < ActiveRecord::Base
   def pending_delete_twin
     return false unless path
 
-    Project.unscoped.where(pending_delete: true).find_by_full_path(path_with_namespace)
+    Project.with_deleted.find_by_full_path(path_with_namespace)
   end
 
   ##

app/services/ci/register_job_service.rb

@@ -54,9 +54,9 @@ module Ci
     def builds_for_shared_runner
       new_builds.
         # don't run projects which have not enabled shared runners and builds
-        joins(:project).where(projects: { shared_runners_enabled: true })
-        .joins('LEFT JOIN project_features ON ci_builds.project_id = project_features.project_id')
-        .where('project_features.builds_access_level IS NULL or project_features.builds_access_level > 0').
+        joins(:project).where(projects: { shared_runners_enabled: true, pending_delete: false }).
+        joins('LEFT JOIN project_features ON ci_builds.project_id = project_features.project_id').
+        where('project_features.builds_access_level IS NULL or project_features.builds_access_level > 0').
 
         # Implement fair scheduling
         # this returns builds that are ordered by number of running builds
@@ -66,7 +66,7 @@ module Ci
     end
 
     def builds_for_specific_runner
-      new_builds.where(project: runner.projects.with_builds_enabled).order('created_at ASC')
+      new_builds.where(project: runner.projects.without_deleted.with_builds_enabled).order('created_at ASC')
     end
 
     def running_builds_for_shared_runners

app/services/groups/destroy_service.rb

@@ -10,7 +10,7 @@ module Groups
     def execute
       group.prepare_for_destroy
 
-      group.projects.with_deleted.each do |project|
+      group.projects.each do |project|
         # Execute the destruction of the models immediately to ensure atomic cleanup.
         # Skip repository removal because we remove directory with namespace
         # that contain all these repositories

app/services/users/destroy_service.rb

@@ -35,7 +35,7 @@ module Users
         Groups::DestroyService.new(group, current_user).execute
       end
 
-      user.personal_projects.with_deleted.each do |project|
+      user.personal_projects.each do |project|
         # Skip repository removal because we remove directory with namespace
         # that contain all this repositories
         ::Projects::DestroyService.new(project, current_user, skip_repo: true).execute

app/workers/stuck_ci_jobs_worker.rb

@@ -45,7 +45,7 @@ class StuckCiJobsWorker
 
   def search(status, timeout)
     builds = Ci::Build.where(status: status).where('ci_builds.updated_at < ?', timeout.ago)
-    builds.joins(:project).includes(:tags, :runner, project: :namespace).find_each(batch_size: 50).each do |build|
+    builds.joins(:project).merge(Project.without_deleted).includes(:tags, :runner, project: :namespace).find_each(batch_size: 50).each do |build|
       yield(build)
     end
   end

changelogs/unreleased/30708-stop-using-deleted-at-to-filter-namespaces.yml

+---
+title: Removes deleted_at and pending_delete occurrences in Project related queries
+merge_request: 12091
+author:

lib/api/helpers/runner.rb

@@ -46,7 +46,8 @@ module API
 
         yield if block_given?
 
-        forbidden!('Project has been deleted!') unless job.project
+        project = job.project
+        forbidden!('Project has been deleted!') if project.nil? || project.pending_delete?
         forbidden!('Job has been erased!') if job.erased?
       end
 

lib/ci/api/helpers.rb

@@ -28,7 +28,8 @@ module Ci
 
         yield if block_given?
 
-        forbidden!('Project has been deleted!') unless build.project
+        project = build.project
+        forbidden!('Project has been deleted!') if project.nil? || project.pending_delete?
         forbidden!('Build has been erased!') if build.erased?
       end
 

spec/models/project_spec.rb

@@ -284,15 +284,6 @@ describe Project, models: true do
     end
   end
 
-  describe 'default_scope' do
-    it 'excludes projects pending deletion from the results' do
-      project = create(:empty_project)
-      create(:empty_project, pending_delete: true)
-
-      expect(Project.all).to eq [project]
-    end
-  end
-
   describe 'project token' do
     it 'sets an random token if none provided' do
       project = FactoryGirl.create :empty_project, runners_token: ''