Merge branch 'master' of https://gitlab.com/gitlab-org/gitlab-ce into...

Merge branch 'master' of https://gitlab.com/gitlab-org/gitlab-ce into 2451-fix-mentions-in-issue-updates

.gitlab-ci.yml

@@ -15,6 +15,7 @@ variables:
   USE_DB: "true"
   USE_BUNDLE_INSTALL: "true"
   GIT_DEPTH: "20"
+  PHANTOMJS_VERSION: "2.1.1"
 
 before_script:
   - source ./scripts/prepare_build.sh

CHANGELOG

@@ -2,6 +2,7 @@ Please view this file on the master branch, on stable branches it's out of date.
 
 v 8.11.0 (unreleased)
   - Remove the http_parser.rb dependency by removing the tinder gem. !5758 (tbalthazar)
+  - Ability to specify branches for Pivotal Tracker integration (Egor Lynko)
   - Fix don't pass a local variable called `i` to a partial. !20510 (herminiotorres)
   - Fix rename `add_users_into_project` and `projects_ids`. !20512 (herminiotorres)
   - Fix the title of the toggle dropdown button. !5515 (herminiotorres)
@@ -54,6 +55,7 @@ v 8.11.0 (unreleased)
   - Optimize checking if a user has read access to a list of issues !5370
   - Store all DB secrets in secrets.yml, under descriptive names !5274
   - Nokogiri's various parsing methods are now instrumented
+  - Add archived badge to project list !5798
   - Add simple identifier to public SSH keys (muteor)
   - Admin page now references docs instead of a specific file !5600 (AnAverageHuman)
   - Add a way to send an email and create an issue based on private personal token. Find the email address from issues page. !3363
@@ -107,6 +109,8 @@ v 8.11.0 (unreleased)
   - Sort folders with submodules in Files view !5521
   - Each `File::exists?` replaced to `File::exist?` because of deprecate since ruby version 2.2.0
   - Add auto-completition in pipeline (Katarzyna Kobierska Ula Budziszewska)
+  - Fix a memory leak caused by Banzai::Filter::SanitizationFilter
+  - Speed up todos queries by limiting the projects set we join with
 
 v 8.10.5
   - Add a data migration to fix some missing timestamps in the members table. !5670
@@ -271,6 +275,7 @@ v 8.10.0
   - Fix new snippet style bug (elliotec)
   - Instrument Rinku usage
   - Be explicit to define merge request discussion variables
+  - Use cache for todos counter calling TodoService
   - Metrics for Rouge::Plugins::Redcarpet and Rouge::Formatters::HTMLGitlab
   - RailsCache metris now includes fetch_hit/fetch_miss and read_hit/read_miss info.
   - Allow [ci skip] to be in any case and allow [skip ci]. !4785 (simon_w)

app/assets/javascripts/issuable.js

@@ -5,13 +5,10 @@
 
   this.Issuable = {
     init: function() {
-      if (!issuable_created) {
-        issuable_created = true;
-        Issuable.initTemplates();
-        Issuable.initSearch();
-        Issuable.initChecks();
-        return Issuable.initLabelFilterRemove();
-      }
+      Issuable.initTemplates();
+      Issuable.initSearch();
+      Issuable.initChecks();
+      return Issuable.initLabelFilterRemove();
     },
     initTemplates: function() {
       return Issuable.labelRow = _.template('<% _.each(labels, function(label){ %> <span class="label-row btn-group" role="group" aria-label="<%- label.title %>" style="color: <%- label.text_color %>;"> <a href="#" class="btn btn-transparent has-tooltip" style="background-color: <%- label.color %>;" title="<%- label.description %>" data-container="body"> <%- label.title %> </a> <button type="button" class="btn btn-transparent label-remove js-label-filter-remove" style="background-color: <%- label.color %>;" data-label="<%- label.title %>"> <i class="fa fa-times"></i> </button> </span> <% }); %>');

app/controllers/dashboard/todos_controller.rb

@@ -37,8 +37,8 @@ class Dashboard::TodosController < Dashboard::ApplicationController
 
   def todos_counts
     {
-      count: TodosFinder.new(current_user, state: :pending).execute.count,
-      done_count: TodosFinder.new(current_user, state: :done).execute.count
+      count: current_user.todos_pending_count,
+      done_count: current_user.todos_done_count
     }
   end
 end

app/finders/projects_finder.rb

 class ProjectsFinder < UnionFinder
-  def execute(current_user = nil, options = {})
+  def execute(current_user = nil, project_ids_relation = nil)
     segments = all_projects(current_user)
+    segments.map! { |s| s.where(id: project_ids_relation) } if project_ids_relation
 
     find_union(segments, Project)
   end

app/finders/todos_finder.rb

@@ -27,9 +27,11 @@ class TodosFinder
     items = by_action_id(items)
     items = by_action(items)
     items = by_author(items)
-    items = by_project(items)
     items = by_state(items)
     items = by_type(items)
+    # Filtering by project HAS TO be the last because we use
+    # the project IDs yielded by the todos query thus far
+    items = by_project(items)
 
     items.reorder(id: :desc)
   end
@@ -91,14 +93,9 @@ class TodosFinder
     @project
   end
 
-  def projects
-    return @projects if defined?(@projects)
-
-    if project?
-      @projects = project
-    else
-      @projects = ProjectsFinder.new.execute(current_user)
-    end
+  def projects(items)
+    item_project_ids = items.reorder(nil).select(:project_id)
+    ProjectsFinder.new.execute(current_user, item_project_ids)
   end
 
   def type?
@@ -136,8 +133,9 @@ class TodosFinder
   def by_project(items)
     if project?
       items = items.where(project: project)
-    elsif projects
-      items = items.merge(projects).joins(:project)
+    else
+      item_projects = projects(items)
+      items = items.merge(item_projects).joins(:project)
     end
 
     items

app/helpers/todos_helper.rb

 module TodosHelper
   def todos_pending_count
-    @todos_pending_count ||= TodosFinder.new(current_user, state: :pending).execute.count
+    @todos_pending_count ||= current_user.todos_pending_count
   end
 
   def todos_done_count
-    @todos_done_count ||= TodosFinder.new(current_user, state: :done).execute.count
+    @todos_done_count ||= current_user.todos_done_count
   end
 
   def todo_action_name(todo)

app/models/project_services/pivotaltracker_service.rb

 class PivotaltrackerService < Service
   include HTTParty
 
-  prop_accessor :token
+  API_ENDPOINT = 'https://www.pivotaltracker.com/services/v5/source_commits'
+
+  prop_accessor :token, :restrict_to_branch
   validates :token, presence: true, if: :activated?
 
   def title
@@ -18,7 +20,17 @@ class PivotaltrackerService < Service
 
   def fields
     [
-      { type: 'text', name: 'token', placeholder: '' }
+      {
+        type: 'text',
+        name: 'token',
+        placeholder: 'Pivotal Tracker API token.'
+      },
+      {
+        type: 'text',
+        name: 'restrict_to_branch',
+        placeholder: 'Comma-separated list of branches which will be ' \
+          'automatically inspected. Leave blank to include all branches.'
+      }
     ]
   end
 
@@ -28,8 +40,8 @@ class PivotaltrackerService < Service
 
   def execute(data)
     return unless supported_events.include?(data[:object_kind])
+    return unless allowed_branch?(data[:ref])
 
-    url = 'https://www.pivotaltracker.com/services/v5/source_commits'
     data[:commits].each do |commit|
       message = {
         'source_commit' => {
@@ -40,7 +52,7 @@ class PivotaltrackerService < Service
         }
       }
       PivotaltrackerService.post(
-        url,
+        API_ENDPOINT,
         body: message.to_json,
         headers: {
           'Content-Type' => 'application/json',
@@ -49,4 +61,15 @@ class PivotaltrackerService < Service
       )
     end
   end
+
+  private
+
+  def allowed_branch?(ref)
+    return true unless ref.present? && restrict_to_branch.present?
+
+    branch = Gitlab::Git.ref_name(ref)
+    allowed_branches = restrict_to_branch.split(',').map(&:strip)
+
+    branch.present? && allowed_branches.include?(branch)
+  end
 end

app/models/user.rb

@@ -809,13 +809,13 @@ class User < ActiveRecord::Base
 
   def todos_done_count(force: false)
     Rails.cache.fetch(['users', id, 'todos_done_count'], force: force) do
-      todos.done.count
+      TodosFinder.new(self, state: :done).execute.count
     end
   end
 
   def todos_pending_count(force: false)
     Rails.cache.fetch(['users', id, 'todos_pending_count'], force: force) do
-      todos.pending.count
+      TodosFinder.new(self, state: :pending).execute.count
     end
   end
 

app/services/merge_requests/get_urls_service.rb

@@ -30,10 +30,21 @@ module MergeRequests
     end
 
     def get_branches(changes)
+      return [] if project.empty_repo?
+      return [] unless project.merge_requests_enabled
+
       changes_list = Gitlab::ChangesList.new(changes)
       changes_list.map do |change|
         next unless Gitlab::Git.branch_ref?(change[:ref])
-        Gitlab::Git.branch_name(change[:ref])
+
+        # Deleted branch
+        next if Gitlab::Git.blank_ref?(change[:newrev])
+
+        # Default branch
+        branch_name = Gitlab::Git.branch_name(change[:ref])
+        next if branch_name == project.default_branch
+
+        branch_name
       end.compact
     end
 

app/services/todo_service.rb

@@ -144,8 +144,9 @@ class TodoService
   def mark_todos_as_done(todos, current_user)
     todos = current_user.todos.where(id: todos.map(&:id)) unless todos.respond_to?(:update_all)
 
-    todos.update_all(state: :done)
+    marked_todos = todos.update_all(state: :done)
     current_user.update_todos_count_cache
+    marked_todos
   end
 
   # When user marks an issue as todo

app/views/shared/projects/_project.html.haml

@@ -12,6 +12,8 @@
 %li.project-row{ class: css_class }
   = cache(cache_key) do
     .controls
+      - if project.archived
+        %span.label.label-warning archived
       - if project.commit.try(:status)
         %span
           = render_commit_status(project.commit)

doc/api/services.md

@@ -355,7 +355,7 @@ PUT /projects/:id/services/gemnasium
 
 Parameters:
 
-- `api_key` (**required**) - Your personal API KEY on gemnasium.com 
+- `api_key` (**required**) - Your personal API KEY on gemnasium.com
 - `token` (**required**) - The project's slug on gemnasium.com
 
 ### Delete Gemnasium service
@@ -503,6 +503,7 @@ PUT /projects/:id/services/pivotaltracker
 Parameters:
 
 - `token` (**required**)
+- `restrict_to_branch` (optional) - Comma-separated list of branches which will be automatically inspected. Leave blank to include all branches.
 
 ### Delete PivotalTracker service
 
@@ -661,4 +662,3 @@ Get JetBrains TeamCity CI service settings for a project.
 ```
 GET /projects/:id/services/teamcity
 ```
-

features/steps/dashboard/dashboard.rb

@@ -26,6 +26,7 @@ class Spinach::Features::Dashboard < Spinach::FeatureSteps
   end
 
   step 'I see prefilled new Merge Request page' do
+    expect(page).to have_selector('.merge-request-form')
     expect(current_path).to eq new_namespace_project_merge_request_path(@project.namespace, @project)
     expect(find("#merge_request_target_project_id").value).to eq @project.id.to_s
     expect(find("input#merge_request_source_branch").value).to eq "fix"

features/steps/dashboard/event_filters.rb

 class Spinach::Features::EventFilters < Spinach::FeatureSteps
+  include WaitForAjax
   include SharedAuthentication
   include SharedPaths
   include SharedProject
@@ -72,14 +73,20 @@ class Spinach::Features::EventFilters < Spinach::FeatureSteps
   end
 
   When 'I click "push" event filter' do
-    click_link("push_event_filter")
+    wait_for_ajax
+    click_link("Push events")
+    wait_for_ajax
   end
 
   When 'I click "team" event filter' do
-    click_link("team_event_filter")
+    wait_for_ajax
+    click_link("Team")
+    wait_for_ajax
   end
 
   When 'I click "merge" event filter' do
-    click_link("merged_event_filter")
+    wait_for_ajax
+    click_link("Merge events")
+    wait_for_ajax
   end
 end

features/steps/dashboard/issues.rb

@@ -43,9 +43,14 @@ class Spinach::Features::DashboardIssues < Spinach::FeatureSteps
 
   step 'I click "All" link' do
     find(".js-author-search").click
+    expect(page).to have_selector(".dropdown-menu-author li a")
     find(".dropdown-menu-author li a", match: :first).click
+    expect(page).not_to have_selector(".dropdown-menu-author li a")
+
     find(".js-assignee-search").click
+    expect(page).to have_selector(".dropdown-menu-assignee li a")
     find(".dropdown-menu-assignee li a", match: :first).click
+    expect(page).not_to have_selector(".dropdown-menu-assignee li a")
   end
 
   def should_see(issue)

features/steps/dashboard/merge_requests.rb

@@ -47,9 +47,14 @@ class Spinach::Features::DashboardMergeRequests < Spinach::FeatureSteps
 
   step 'I click "All" link' do
     find(".js-author-search").click
+    expect(page).to have_selector(".dropdown-menu-author li a")
     find(".dropdown-menu-author li a", match: :first).click
+    expect(page).not_to have_selector(".dropdown-menu-author li a")
+
     find(".js-assignee-search").click
+    expect(page).to have_selector(".dropdown-menu-assignee li a")
     find(".dropdown-menu-assignee li a", match: :first).click
+    expect(page).not_to have_selector(".dropdown-menu-assignee li a")
   end
 
   def should_see(merge_request)

features/steps/dashboard/new_project.rb

@@ -29,6 +29,7 @@ class Spinach::Features::NewProject < Spinach::FeatureSteps
   end
 
   step 'I am redirected to the GitHub import page' do
+    expect(page).to have_content('Import Projects from GitHub')
     expect(current_path).to eq new_import_github_path
   end
 
@@ -47,6 +48,7 @@ class Spinach::Features::NewProject < Spinach::FeatureSteps
   end
 
   step 'I redirected to Google Code import page' do
+    expect(page).to have_content('Import projects from Google Code')
     expect(current_path).to eq new_import_google_code_path
   end
 end

features/steps/project/builds/artifacts.rb

@@ -10,6 +10,7 @@ class Spinach::Features::ProjectBuildsArtifacts < Spinach::FeatureSteps
 
   step 'I click artifacts browse button' do
     click_link 'Browse'
+    expect(page).not_to have_selector('.build-sidebar')
   end
 
   step 'I should see content of artifacts archive' do

features/steps/project/forked_merge_requests.rb

@@ -34,6 +34,9 @@ class Spinach::Features::ProjectForkedMergeRequests < Spinach::FeatureSteps
   end
 
   step 'I fill out a "Merge Request On Forked Project" merge request' do
+    expect(page).to have_content('Source branch')
+    expect(page).to have_content('Target branch')
+
     first('.js-source-project').click
     first('.dropdown-source-project a', text: @forked_project.path_with_namespace)
 

features/steps/project/issues/issues.rb

@@ -354,6 +354,8 @@ class Spinach::Features::ProjectIssues < Spinach::FeatureSteps
   end
 
   def filter_issue(text)
+    sleep 1
     fill_in 'issue_search', with: text
+    sleep 1
   end
 end

features/steps/project/merge_requests.rb

@@ -489,10 +489,12 @@ class Spinach::Features::ProjectMergeRequests < Spinach::FeatureSteps
   end
 
   step 'I fill in merge request search with "Fe"' do
+    sleep 1
     fill_in 'issue_search', with: "Fe"
   end
 
   step 'I click the "Target branch" dropdown' do
+    expect(page).to have_content('Target branch')
     first('.target_branch').click
   end
 

features/steps/project/source/browse_files.rb

@@ -69,6 +69,7 @@ class Spinach::Features::ProjectSourceBrowseFiles < Spinach::FeatureSteps
   end
 
   step 'I edit code' do
+    expect(page).to have_selector('.file-editor')
     set_new_content
   end
 
@@ -131,6 +132,7 @@ class Spinach::Features::ProjectSourceBrowseFiles < Spinach::FeatureSteps
   step 'I click on "New file" link in repo' do
     find('.add-to-tree').click
     click_link 'New file'
+    expect(page).to have_selector('.file-editor')
   end
 
   step 'I click on "Upload file" link in repo' do

features/steps/project/wiki.rb

@@ -142,7 +142,9 @@ class Spinach::Features::ProjectWiki < Spinach::FeatureSteps
   end
 
   step 'I edit the Wiki page with a path' do
+    expect(page).to have_content('three')
     click_on 'three'
+    expect(find('.nav-text')).to have_content('Three')
     click_on 'Edit'
   end
 

features/steps/shared/issuable.rb

@@ -133,9 +133,7 @@ module SharedIssuable
   end
 
   step 'The list should be sorted by "Oldest updated"' do
-    page.within('.content div.dropdown.inline.prepend-left-10') do
-      expect(page.find('button.dropdown-toggle.btn')).to have_content('Oldest updated')
-    end
+    expect(find('.issues-filters')).to have_content('Oldest updated')
   end
 
   step 'I click link "Next" in the sidebar' do

features/support/wait_for_ajax.rb

+module WaitForAjax
+  def wait_for_ajax
+    Timeout.timeout(Capybara.default_max_wait_time) do
+      loop until finished_all_ajax_requests?
+    end
+  end
+
+  def finished_all_ajax_requests?
+    page.evaluate_script('jQuery.active').zero?
+  end
+end

lib/api/todos.rb

@@ -61,9 +61,9 @@ module API
       #
       delete ':id' do
         todo = current_user.todos.find(params[:id])
-        todo.done
+        TodoService.new.mark_todos_as_done([todo], current_user)
 
-        present todo, with: Entities::Todo, current_user: current_user
+        present todo.reload, with: Entities::Todo, current_user: current_user
       end
 
       # Mark all todos as done
@@ -73,9 +73,7 @@ module API
       #
       delete do
         todos = find_todos
-        todos.each(&:done)
-
-        todos.length
+        TodoService.new.mark_todos_as_done(todos, current_user)
       end
     end
   end

lib/banzai/filter/sanitization_filter.rb

@@ -7,7 +7,7 @@ module Banzai
       UNSAFE_PROTOCOLS = %w(data javascript vbscript).freeze
 
       def whitelist
-        whitelist = super
+        whitelist = super.dup
 
         customize_whitelist(whitelist)
 
@@ -42,6 +42,8 @@ module Banzai
         # Allow any protocol in `a` elements...
         whitelist[:protocols].delete('a')
 
+        whitelist[:transformers] = whitelist[:transformers].dup
+
         # ...but then remove links with unsafe protocols
         whitelist[:transformers].push(remove_unsafe_links)
 

lib/gitlab/checks/change_access.rb

@@ -11,7 +11,7 @@ module Gitlab
       end
 
       def exec
-        error = protected_branch_checks || tag_checks || push_checks
+        error = push_checks || tag_checks || protected_branch_checks
 
         if error
           GitAccessStatus.new(false, error)

scripts/prepare_build.sh

@@ -20,10 +20,11 @@ if [ -f /.dockerenv ] || [ -f ./dockerinit ]; then
 
     # Install phantomjs package
     pushd vendor/apt
-    if [ ! -e phantomjs_1.9.8-0jessie_amd64.deb ]; then
-        wget -q https://gitlab.com/axil/phantomjs-debian/raw/master/phantomjs_1.9.8-0jessie_amd64.deb
+    PHANTOMJS_FILE="phantomjs-$PHANTOMJS_VERSION-linux-x86_64"
+    if [ ! -d "$PHANTOMJS_FILE" ]; then
+        curl -q -L "https://s3.amazonaws.com/gitlab-build-helpers/$PHANTOMJS_FILE.tar.bz2" | tar jx
     fi
-    dpkg -i phantomjs_1.9.8-0jessie_amd64.deb
+    cp "$PHANTOMJS_FILE/bin/phantomjs" "/usr/bin/"
     popd
 
     # Try to install packages

spec/features/issuables/default_sort_order_spec.rb

@@ -55,7 +55,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last updated"' do
         visit_merge_requests_with_state(project, 'merged')
 
-        expect(selected_sort_order).to eq('last updated')
+        expect(find('.issues-other-filters')).to have_content('Last updated')
         expect(first_merge_request).to include(last_updated_issuable.title)
         expect(last_merge_request).to include(first_updated_issuable.title)
       end
@@ -67,7 +67,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last updated"' do
         visit_merge_requests_with_state(project, 'closed')
 
-        expect(selected_sort_order).to eq('last updated')
+        expect(find('.issues-other-filters')).to have_content('Last updated')
         expect(first_merge_request).to include(last_updated_issuable.title)
         expect(last_merge_request).to include(first_updated_issuable.title)
       end
@@ -79,7 +79,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last created"' do
         visit_merge_requests_with_state(project, 'all')
 
-        expect(selected_sort_order).to eq('last created')
+        expect(find('.issues-other-filters')).to have_content('Last created')
         expect(first_merge_request).to include(last_created_issuable.title)
         expect(last_merge_request).to include(first_created_issuable.title)
       end
@@ -108,7 +108,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last created"' do
         visit_issues project
 
-        expect(selected_sort_order).to eq('last created')
+        expect(find('.issues-other-filters')).to have_content('Last created')
         expect(first_issue).to include(last_created_issuable.title)
         expect(last_issue).to include(first_created_issuable.title)
       end
@@ -120,7 +120,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last created"' do
         visit_issues_with_state(project, 'open')
 
-        expect(selected_sort_order).to eq('last created')
+        expect(find('.issues-other-filters')).to have_content('Last created')
         expect(first_issue).to include(last_created_issuable.title)
         expect(last_issue).to include(first_created_issuable.title)
       end
@@ -132,7 +132,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last updated"' do
         visit_issues_with_state(project, 'closed')
 
-        expect(selected_sort_order).to eq('last updated')
+        expect(find('.issues-other-filters')).to have_content('Last updated')
         expect(first_issue).to include(last_updated_issuable.title)
         expect(last_issue).to include(first_updated_issuable.title)
       end
@@ -144,7 +144,7 @@ describe 'Projects > Issuables > Default sort order', feature: true do
       it 'is "last created"' do
         visit_issues_with_state(project, 'all')
 
-        expect(selected_sort_order).to eq('last created')
+        expect(find('.issues-other-filters')).to have_content('Last created')
         expect(first_issue).to include(last_created_issuable.title)
         expect(last_issue).to include(first_created_issuable.title)
       end

spec/features/issues/filter_issues_spec.rb

@@ -117,7 +117,7 @@ describe 'Filter issues', feature: true do
 
       find('.dropdown-menu-user-link', text: user.username).click
 
-      wait_for_ajax
+      expect(page).not_to have_selector('.issues-list .issue')
 
       find('.js-label-select').click
 

spec/features/merge_requests/create_new_mr_spec.rb

@@ -13,6 +13,8 @@ feature 'Create New Merge Request', feature: true, js: true do
 
   it 'generates a diff for an orphaned branch' do
     click_link 'New Merge Request'
+    expect(page).to have_content('Source branch')
+    expect(page).to have_content('Target branch')
 
     first('.js-source-branch').click
     first('.dropdown-source-branch .dropdown-content a', text: 'orphaned-branch').click

spec/features/profiles/preferences_spec.rb

@@ -68,10 +68,14 @@ describe 'Profile > Preferences', feature: true do
 
       allowing_for_delay do
         find('#logo').click
+
+        expect(page).to have_content("You don't have starred projects yet")
         expect(page.current_path).to eq starred_dashboard_projects_path
       end
 
       click_link 'Your Projects'
+
+      expect(page).not_to have_content("You don't have starred projects yet")
       expect(page.current_path).to eq dashboard_projects_path
     end
   end

spec/features/projects/files/project_owner_creates_license_file_spec.rb

@@ -39,6 +39,7 @@ feature 'project owner creates a license file', feature: true, js: true do
   scenario 'project master creates a license file from the "Add license" link' do
     click_link 'Add License'
 
+    expect(page).to have_content('New File')
     expect(current_path).to eq(
       namespace_project_new_blob_path(project.namespace, project, 'master'))
     expect(find('#file_name').value).to eq('LICENSE')

spec/features/projects/files/project_owner_sees_link_to_create_license_file_in_empty_project_spec.rb

@@ -14,6 +14,7 @@ feature 'project owner sees a link to create a license file in empty project', f
     visit namespace_project_path(project.namespace, project)
     click_link 'Create empty bare repository'
     click_on 'LICENSE'
+    expect(page).to have_content('New File')
 
     expect(current_path).to eq(
       namespace_project_new_blob_path(project.namespace, project, 'master'))

spec/features/u2f_spec.rb

 require 'spec_helper'
 
 feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature: true, js: true do
+  include WaitForAjax
+
   before { allow_any_instance_of(U2fHelper).to receive(:inject_u2f_api?).and_return(true) }
 
+  def manage_two_factor_authentication
+    click_on 'Manage Two-Factor Authentication'
+    expect(page).to have_content("Setup New U2F Device")
+    wait_for_ajax
+  end
+
   def register_u2f_device(u2f_device = nil)
     u2f_device ||= FakeU2fDevice.new(page)
     u2f_device.respond_to_u2f_registration
@@ -34,7 +42,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
     describe 'when 2FA via OTP is enabled' do
       it 'allows registering a new device' do
         visit profile_account_path
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
         expect(page.body).to match("You've already enabled two-factor authentication using mobile")
 
         register_u2f_device
@@ -46,15 +54,15 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
         visit profile_account_path
 
         # First device
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
         register_u2f_device
         expect(page.body).to match('Your U2F device was registered')
 
         # Second device
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
         register_u2f_device
         expect(page.body).to match('Your U2F device was registered')
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
         expect(page.body).to match('You have 2 U2F devices registered')
       end
     end
@@ -62,7 +70,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
     it 'allows the same device to be registered for multiple users' do
       # First user
       visit profile_account_path
-      click_on 'Manage Two-Factor Authentication'
+      manage_two_factor_authentication
       u2f_device = register_u2f_device
       expect(page.body).to match('Your U2F device was registered')
       logout
@@ -71,7 +79,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
       user = login_as(:user)
       user.update_attribute(:otp_required_for_login, true)
       visit profile_account_path
-      click_on 'Manage Two-Factor Authentication'
+      manage_two_factor_authentication
       register_u2f_device(u2f_device)
       expect(page.body).to match('Your U2F device was registered')
 
@@ -81,7 +89,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
     context "when there are form errors" do
       it "doesn't register the device if there are errors" do
         visit profile_account_path
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
 
         # Have the "u2f device" respond with bad data
         page.execute_script("u2f.register = function(_,_,_,callback) { callback('bad response'); };")
@@ -96,7 +104,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
 
       it "allows retrying registration" do
         visit profile_account_path
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
 
         # Failed registration
         page.execute_script("u2f.register = function(_,_,_,callback) { callback('bad response'); };")
@@ -122,7 +130,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
       login_as(user)
       user.update_attribute(:otp_required_for_login, true)
       visit profile_account_path
-      click_on 'Manage Two-Factor Authentication'
+      manage_two_factor_authentication
       @u2f_device = register_u2f_device
       logout
     end
@@ -161,7 +169,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
           current_user = login_as(:user)
           current_user.update_attribute(:otp_required_for_login, true)
           visit profile_account_path
-          click_on 'Manage Two-Factor Authentication'
+          manage_two_factor_authentication
           register_u2f_device
           logout
 
@@ -182,7 +190,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
           current_user = login_as(:user)
           current_user.update_attribute(:otp_required_for_login, true)
           visit profile_account_path
-          click_on 'Manage Two-Factor Authentication'
+          manage_two_factor_authentication
           register_u2f_device(@u2f_device)
           logout
 
@@ -248,7 +256,7 @@ feature 'Using U2F (Universal 2nd Factor) Devices for Authentication', feature:
         user = login_as(:user)
         user.update_attribute(:otp_required_for_login, true)
         visit profile_account_path
-        click_on 'Manage Two-Factor Authentication'
+        manage_two_factor_authentication
         expect(page).to have_content("Your U2F device needs to be set up.")
         register_u2f_device
       end

spec/features/variables_spec.rb

@@ -42,6 +42,7 @@ describe 'Project variables', js: true do
       find('.btn-variable-edit').click
     end
 
+    expect(page).to have_content('Update variable')
     fill_in('variable_key', with: 'key')
     fill_in('variable_value', with: 'key value')
     click_button('Save variable')

spec/finders/projects_finder_spec.rb

@@ -23,73 +23,36 @@ describe ProjectsFinder do
 
     let(:finder) { described_class.new }
 
-    describe 'without a group' do
-      describe 'without a user' do
-        subject { finder.execute }
+    describe 'without a user' do
+      subject { finder.execute }
 
-        it { is_expected.to eq([public_project]) }
-      end
-
-      describe 'with a user' do
-        subject { finder.execute(user) }
-
-        describe 'without private projects' do
-          it { is_expected.to eq([public_project, internal_project]) }
-        end
-
-        describe 'with private projects' do
-          before do
-            private_project.team.add_user(user, Gitlab::Access::MASTER)
-          end
-
-          it do
-            is_expected.to eq([public_project, internal_project,
-                               private_project])
-          end
-        end
-      end
+      it { is_expected.to eq([public_project]) }
     end
 
-    describe 'with a group' do
-      describe 'without a user' do
-        subject { finder.execute(nil, group: group) }
+    describe 'with a user' do
+      subject { finder.execute(user) }
 
-        it { is_expected.to eq([public_project]) }
+      describe 'without private projects' do
+        it { is_expected.to eq([public_project, internal_project]) }
       end
 
-      describe 'with a user' do
-        subject { finder.execute(user, group: group) }
-
-        describe 'without shared projects' do
-          it { is_expected.to eq([public_project, internal_project]) }
+      describe 'with private projects' do
+        before do
+          private_project.team.add_user(user, Gitlab::Access::MASTER)
         end
 
-        describe 'with shared projects and group membership' do
-          before do
-            group.add_user(user, Gitlab::Access::DEVELOPER)
-
-            shared_project.project_group_links.
-              create(group_access: Gitlab::Access::MASTER, group: group)
-          end
-
-          it do
-            is_expected.to eq([shared_project, public_project, internal_project])
-          end
+        it do
+          is_expected.to eq([public_project, internal_project, private_project])
         end
+      end
+    end
 
-        describe 'with shared projects and project membership' do
-          before do
-            shared_project.team.add_user(user, Gitlab::Access::DEVELOPER)
+    describe 'with project_ids_relation' do
+      let(:project_ids_relation) { Project.where(id: internal_project.id) }
 
-            shared_project.project_group_links.
-              create(group_access: Gitlab::Access::MASTER, group: group)
-          end
+      subject { finder.execute(user, project_ids_relation) }
 
-          it do
-            is_expected.to eq([shared_project, public_project, internal_project])
-          end
-        end
-      end
+      it { is_expected.to eq([internal_project]) }
     end
   end
 end

spec/lib/gitlab/checks/change_access_spec.rb

+require 'spec_helper'
+
+describe Gitlab::Checks::ChangeAccess, lib: true do
+  describe '#exec' do
+    let(:user) { create(:user) }
+    let(:project) { create(:project) }
+    let(:user_access) { Gitlab::UserAccess.new(user, project: project) }
+    let(:changes) do
+      {
+        oldrev: 'be93687618e4b132087f430a4d8fc3a609c9b77c',
+        newrev: '54fcc214b94e78d7a41a9a8fe6d87a5e59500e51',
+        ref: 'refs/heads/master'
+      }
+    end
+
+    subject { described_class.new(changes, project: project, user_access: user_access).exec }
+
+    before { allow(user_access).to receive(:can_do_action?).with(:push_code).and_return(true) }
+
+    context 'without failed checks' do
+      it "doesn't return any error" do
+        expect(subject.status).to be(true)
+      end
+    end
+
+    context 'when the user is not allowed to push code' do
+      it 'returns an error' do
+        expect(user_access).to receive(:can_do_action?).with(:push_code).and_return(false)
+
+        expect(subject.status).to be(false)
+        expect(subject.message).to eq('You are not allowed to push code to this project.')
+      end
+    end
+
+    context 'tags check' do
+      let(:changes) do
+        {
+          oldrev: 'be93687618e4b132087f430a4d8fc3a609c9b77c',
+          newrev: '54fcc214b94e78d7a41a9a8fe6d87a5e59500e51',
+          ref: 'refs/tags/v1.0.0'
+        }
+      end
+
+      it 'returns an error if the user is not allowed to update tags' do
+        expect(user_access).to receive(:can_do_action?).with(:admin_project).and_return(false)
+
+        expect(subject.status).to be(false)
+        expect(subject.message).to eq('You are not allowed to change existing tags on this project.')
+      end
+    end
+
+    context 'protected branches check' do
+      before do
+        allow(project).to receive(:protected_branch?).with('master').and_return(true)
+      end
+
+      it 'returns an error if the user is not allowed to do forced pushes to protected branches' do
+        expect(Gitlab::Checks::ForcePush).to receive(:force_push?).and_return(true)
+        expect(user_access).to receive(:can_do_action?).with(:force_push_code_to_protected_branches).and_return(false)
+
+        expect(subject.status).to be(false)
+        expect(subject.message).to eq('You are not allowed to force push code to a protected branch on this project.')
+      end
+
+      it 'returns an error if the user is not allowed to merge to protected branches' do
+        expect_any_instance_of(Gitlab::Checks::MatchingMergeRequest).to receive(:match?).and_return(true)
+        expect(user_access).to receive(:can_merge_to_branch?).and_return(false)
+        expect(user_access).to receive(:can_push_to_branch?).and_return(false)
+
+        expect(subject.status).to be(false)
+        expect(subject.message).to eq('You are not allowed to merge code into protected branches on this project.')
+      end
+
+      it 'returns an error if the user is not allowed to push to protected branches' do
+        expect(user_access).to receive(:can_push_to_branch?).and_return(false)
+
+        expect(subject.status).to be(false)
+        expect(subject.message).to eq('You are not allowed to push code to protected branches on this project.')
+      end
+
+      context 'branch deletion' do
+        let(:changes) do
+          {
+            oldrev: 'be93687618e4b132087f430a4d8fc3a609c9b77c',
+            newrev: '0000000000000000000000000000000000000000',
+            ref: 'refs/heads/master'
+          }
+        end
+
+        it 'returns an error if the user is not allowed to delete protected branches' do
+          expect(user_access).to receive(:can_do_action?).with(:remove_protected_branches).and_return(false)
+
+          expect(subject.status).to be(false)
+          expect(subject.message).to eq('You are not allowed to delete protected branches from this project.')
+        end
+      end
+    end
+  end
+end

spec/models/project_services/pivotaltracker_service_spec.rb

@@ -39,4 +39,75 @@ describe PivotaltrackerService, models: true do
       it { is_expected.not_to validate_presence_of(:token) }
     end
   end
+
+  describe 'Execute' do
+    let(:service) do
+      PivotaltrackerService.new.tap do |service|
+        service.token = 'secret_api_token'
+      end
+    end
+
+    let(:url) { PivotaltrackerService::API_ENDPOINT }
+
+    def push_data(branch: 'master')
+      {
+        object_kind: 'push',
+        ref: "refs/heads/#{branch}",
+        commits: [
+          {
+            id: '21c12ea',
+            author: {
+              name: 'Some User'
+            },
+            url: 'https://example.com/commit',
+            message: 'commit message',
+          }
+        ]
+      }
+    end
+
+    before do
+      WebMock.stub_request(:post, url)
+    end
+
+    it 'should post correct message' do
+      service.execute(push_data)
+      expect(WebMock).to have_requested(:post, url).with(
+        body: {
+          'source_commit' => {
+            'commit_id' => '21c12ea',
+            'author' => 'Some User',
+            'url' => 'https://example.com/commit',
+            'message' => 'commit message'
+          }
+        },
+        headers: {
+          'Content-Type' => 'application/json',
+          'X-TrackerToken' => 'secret_api_token'
+        }
+      ).once
+    end
+
+    context 'when allowed branches is specified' do
+      let(:service) do
+        super().tap do |service|
+          service.restrict_to_branch = 'master,v10'
+        end
+      end
+
+      it 'should post message if branch is in the list' do
+        service.execute(push_data(branch: 'master'))
+        service.execute(push_data(branch: 'v10'))
+
+        expect(WebMock).to have_requested(:post, url).twice
+      end
+
+      it 'should not post message if branch is not in the list' do
+        service.execute(push_data(branch: 'mas'))
+        service.execute(push_data(branch: 'v11'))
+
+        expect(WebMock).not_to have_requested(:post, url)
+      end
+    end
+  end
 end

spec/requests/api/todos_spec.rb

@@ -117,6 +117,12 @@ describe API::Todos, api: true do
         expect(response.status).to eq(200)
         expect(pending_1.reload).to be_done
       end
+
+      it 'updates todos cache' do
+        expect_any_instance_of(User).to receive(:update_todos_count_cache).and_call_original
+
+        delete api("/todos/#{pending_1.id}", john_doe)
+      end
     end
   end
 
@@ -139,6 +145,12 @@ describe API::Todos, api: true do
         expect(pending_2.reload).to be_done
         expect(pending_3.reload).to be_done
       end
+
+      it 'updates todos cache' do
+        expect_any_instance_of(User).to receive(:update_todos_count_cache).and_call_original
+
+        delete api("/todos", john_doe)
+      end
     end
   end
 

spec/services/merge_requests/get_urls_service_spec.rb

@@ -7,7 +7,9 @@ describe MergeRequests::GetUrlsService do
   let(:new_merge_request_url) { "http://localhost/#{project.namespace.name}/#{project.path}/merge_requests/new?merge_request%5Bsource_branch%5D=#{source_branch}" }
   let(:show_merge_request_url) { "http://localhost/#{project.namespace.name}/#{project.path}/merge_requests/#{merge_request.iid}" }
   let(:new_branch_changes) { "#{Gitlab::Git::BLANK_SHA} 570e7b2abdd848b95f2f578043fc23bd6f6fd24d refs/heads/#{source_branch}" }
+  let(:deleted_branch_changes) { "d14d6c0abdd253381df51a723d58691b2ee1ab08 #{Gitlab::Git::BLANK_SHA} refs/heads/#{source_branch}" }
   let(:existing_branch_changes) { "d14d6c0abdd253381df51a723d58691b2ee1ab08 570e7b2abdd848b95f2f578043fc23bd6f6fd24d refs/heads/#{source_branch}" }
+  let(:default_branch_changes) { "d14d6c0abdd253381df51a723d58691b2ee1ab08 570e7b2abdd848b95f2f578043fc23bd6f6fd24d refs/heads/master" }
 
   describe "#execute" do
     shared_examples 'new_merge_request_link' do
@@ -32,6 +34,28 @@ describe MergeRequests::GetUrlsService do
       end
     end
 
+    shared_examples 'no_merge_request_url' do
+      it 'returns no URL' do
+        result = service.execute(changes)
+        expect(result).to be_empty
+      end
+    end
+
+    context 'pushing to default branch' do
+      let(:changes) { default_branch_changes }
+      it_behaves_like 'no_merge_request_url'
+    end
+
+    context 'pushing to project with MRs disabled' do
+      let(:changes) { new_branch_changes }
+
+      before do
+        project.merge_requests_enabled = false
+      end
+
+      it_behaves_like 'no_merge_request_url'
+    end
+
     context 'pushing one completely new branch' do
       let(:changes) { new_branch_changes }
       it_behaves_like 'new_merge_request_link'
@@ -42,6 +66,11 @@ describe MergeRequests::GetUrlsService do
       it_behaves_like 'new_merge_request_link'
     end
 
+    context 'pushing to deleted branch' do
+      let(:changes) { deleted_branch_changes }
+      it_behaves_like 'no_merge_request_url'
+    end
+
     context 'pushing to existing branch and merge request opened' do
       let!(:merge_request) { create(:merge_request, source_project: project, source_branch: source_branch) }
       let(:changes) { existing_branch_changes }
@@ -61,6 +90,11 @@ describe MergeRequests::GetUrlsService do
       let(:changes) { existing_branch_changes }
       # Source project is now the forked one
       let(:service) { MergeRequests::GetUrlsService.new(forked_project) }
+
+      before do
+        allow(forked_project).to receive(:empty_repo?).and_return(false)
+      end
+
       it_behaves_like 'show_merge_request_url'
     end
 

spec/services/todo_service_spec.rb

@@ -472,6 +472,42 @@ describe TodoService, services: true do
     expect(john_doe.todos_pending_count).to eq(1)
   end
 
+  describe '#mark_todos_as_done' do
+    let(:issue) { create(:issue, project: project, author: author, assignee: john_doe) }
+
+    it 'marks a relation of todos as done' do
+      create(:todo, :mentioned, user: john_doe, target: issue, project: project)
+
+      todos = TodosFinder.new(john_doe, {}).execute
+      expect { TodoService.new.mark_todos_as_done(todos, john_doe) }
+       .to change { john_doe.todos.done.count }.from(0).to(1)
+    end
+
+    it 'marks an array of todos as done' do
+      todo = create(:todo, :mentioned, user: john_doe, target: issue, project: project)
+
+      expect { TodoService.new.mark_todos_as_done([todo], john_doe) }
+        .to change { todo.reload.state }.from('pending').to('done')
+    end
+
+    it 'returns the number of updated todos' do # Needed on API
+      todo = create(:todo, :mentioned, user: john_doe, target: issue, project: project)
+
+      expect(TodoService.new.mark_todos_as_done([todo], john_doe)).to eq(1)
+    end
+
+    it 'caches the number of todos of a user', :caching do
+      create(:todo, :mentioned, user: john_doe, target: issue, project: project)
+      todo = create(:todo, :mentioned, user: john_doe, target: issue, project: project)
+      TodoService.new.mark_todos_as_done([todo], john_doe)
+
+      expect_any_instance_of(TodosFinder).not_to receive(:execute)
+
+      expect(john_doe.todos_done_count).to eq(1)
+      expect(john_doe.todos_pending_count).to eq(1)
+    end
+  end
+
   def should_create_todo(attributes = {})
     attributes.reverse_merge!(
       project: project,