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Gwenaël Samain
cython
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1c5e5b2f
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1c5e5b2f
authored
Aug 11, 2018
by
gabrieldemarmiesse
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Moving Integrating multiple modules and Distributing cython modules into the userguide.
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docs/src/userguide/source_files_and_compilation.rst
docs/src/userguide/source_files_and_compilation.rst
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docs/src/userguide/source_files_and_compilation.rst
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@@ -246,6 +246,153 @@ them through :func:`cythonize`::
)
Distributing Cython modules
----------------------------
It is strongly recommended that you distribute the generated ``.c`` files as well
as your Cython sources, so that users can install your module without needing
to have Cython available.
It is also recommended that Cython compilation not be enabled by default in the
version you distribute. Even if the user has Cython installed, he/she probably
doesn't want to use it just to install your module. Also, the installed version
may not be the same one you used, and may not compile your sources correctly.
This simply means that the :file:`setup.py` file that you ship with will just
be a normal distutils file on the generated `.c` files, for the basic example
we would have instead::
from distutils.core import setup
from distutils.extension import Extension
setup(
ext_modules = [Extension("example", ["example.c"])]
)
This is easy to combine with :func:`cythonize` by changing the file extension
of the extension module sources::
from distutils.core import setup
from distutils.extension import Extension
USE_CYTHON = ... # command line option, try-import, ...
ext = '.pyx' if USE_CYTHON else '.c'
extensions = [Extension("example", ["example"+ext])]
if USE_CYTHON:
from Cython.Build import cythonize
extensions = cythonize(extensions)
setup(
ext_modules = extensions
)
If you have many extensions and want to avoid the additional complexity in the
declarations, you can declare them with their normal Cython sources and then
call the following function instead of ``cythonize()`` to adapt the sources
list in the Extensions when not using Cython::
import os.path
def no_cythonize(extensions, **_ignore):
for extension in extensions:
sources = []
for sfile in extension.sources:
path, ext = os.path.splitext(sfile)
if ext in ('.pyx', '.py'):
if extension.language == 'c++':
ext = '.cpp'
else:
ext = '.c'
sfile = path + ext
sources.append(sfile)
extension.sources[:] = sources
return extensions
Another option is to make Cython a setup dependency of your system and use
Cython's build_ext module which runs ``cythonize`` as part of the build process::
setup(
setup_requires=[
'cython>=0.x',
],
extensions = [Extension("*", ["*.pyx"])],
cmdclass={'build_ext': Cython.Build.build_ext},
...
)
If you want to expose the C-level interface of your library for other
libraries to cimport from, use package_data to install the ``.pxd`` files,
e.g.::
setup(
package_data = {
'my_package': ['*.pxd'],
'my_package/sub_package': ['*.pxd'],
},
...
)
These ``.pxd`` files need not have corresponding ``.pyx``
modules if they contain purely declarations of external libraries.
Remember that if you use setuptools instead of distutils, the default
action when running ``python setup.py install`` is to create a zipped
``egg`` file which will not work with ``cimport`` for ``pxd`` files
when you try to use them from a dependent package.
To prevent this, include ``zip_safe=False`` in the arguments to ``setup()``.
Integrating multiple modules
============================
In some scenarios, it can be useful to link multiple Cython modules
(or other extension modules) into a single binary, e.g. when embedding
Python in another application. This can be done through the inittab
import mechanism of CPython.
Create a new C file to integrate the extension modules and add this
macro to it::
#if PY_MAJOR_VERSION < 3
# define MODINIT(name) init ## name
#else
# define MODINIT(name) PyInit_ ## name
#endif
If you are only targeting Python 3.x, just use ``PyInit_`` as prefix.
Then, for each or the modules, declare its module init function
as follows, replacing ``...`` by the name of the module::
PyMODINIT_FUNC MODINIT(...) (void);
In C++, declare them as ``extern C``.
If you are not sure of the name of the module init function, refer
to your generated module source file and look for a function name
starting with ``PyInit_``.
Next, before you start the Python runtime from your application code
with ``Py_Initialize()``, you need to initialise the modules at runtime
using the ``PyImport_AppendInittab()`` C-API function, again inserting
the name of each of the modules::
PyImport_AppendInittab("...", MODINIT(...));
This enables normal imports for the embedded extension modules.
In order to prevent the joined binary from exporting all of the module
init functions as public symbols, Cython 0.28 and later can hide these
symbols if the macro ``CYTHON_NO_PYINIT_EXPORT`` is defined while
C-compiling the module C files.
Also take a look at the `cython_freeze
<https://github.com/cython/cython/blob/master/bin/cython_freeze>`_ tool.
.. _pyximport:
Compiling with :mod:`pyximport`
...
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