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Joshua
wendelin.core
Commits
c02776e9
Commit
c02776e9
authored
Dec 16, 2019
by
Kirill Smelkov
Browse files
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bigfile/zodb: Factor-out LivePersistent into -> lib/zodb
It was from long-ago marked as "XXX move to common place".
parent
8c32c9f6
Changes
6
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6 changed files
with
177 additions
and
178 deletions
+177
-178
bigarray/array_zodb.py
bigarray/array_zodb.py
+2
-1
bigarray/tests/test_arrayzodb.py
bigarray/tests/test_arrayzodb.py
+2
-1
bigfile/file_zodb.py
bigfile/file_zodb.py
+1
-28
bigfile/tests/test_filezodb.py
bigfile/tests/test_filezodb.py
+4
-146
lib/tests/test_zodb.py
lib/tests/test_zodb.py
+143
-2
lib/zodb.py
lib/zodb.py
+25
-0
No files found.
bigarray/array_zodb.py
View file @
c02776e9
...
@@ -29,7 +29,8 @@ inherits most of the properties and specifics from its parents.
...
@@ -29,7 +29,8 @@ inherits most of the properties and specifics from its parents.
"""
"""
from
wendelin.bigarray
import
BigArray
from
wendelin.bigarray
import
BigArray
from
wendelin.bigfile.file_zodb
import
ZBigFile
,
LivePersistent
from
wendelin.bigfile.file_zodb
import
ZBigFile
from
wendelin.lib.zodb
import
LivePersistent
import
inspect
import
inspect
...
...
bigarray/tests/test_arrayzodb.py
View file @
c02776e9
...
@@ -18,9 +18,10 @@
...
@@ -18,9 +18,10 @@
# See COPYING file for full licensing terms.
# See COPYING file for full licensing terms.
# See https://www.nexedi.com/licensing for rationale and options.
# See https://www.nexedi.com/licensing for rationale and options.
from
wendelin.bigarray.array_zodb
import
ZBigArray
from
wendelin.bigarray.array_zodb
import
ZBigArray
from
wendelin.bigfile.tests.test_filezodb
import
kkey
,
cacheInfo
,
ram_reclaim_all
from
wendelin.bigfile.tests.test_filezodb
import
ram_reclaim_all
from
wendelin.bigfile.tests.test_thread
import
NotifyChannel
from
wendelin.bigfile.tests.test_thread
import
NotifyChannel
from
wendelin.lib.zodb
import
dbclose
from
wendelin.lib.zodb
import
dbclose
from
wendelin.lib.tests.test_zodb
import
cacheInfo
,
kkey
from
wendelin.lib.testing
import
getTestDB
from
wendelin.lib.testing
import
getTestDB
from
persistent
import
UPTODATE
from
persistent
import
UPTODATE
import
transaction
import
transaction
...
...
bigfile/file_zodb.py
View file @
c02776e9
...
@@ -133,7 +133,7 @@ will be our future approach after we teach NEO about object deduplication.
...
@@ -133,7 +133,7 @@ will be our future approach after we teach NEO about object deduplication.
from
wendelin.bigfile
import
BigFile
,
WRITEOUT_STORE
,
WRITEOUT_MARKSTORED
from
wendelin.bigfile
import
BigFile
,
WRITEOUT_STORE
,
WRITEOUT_MARKSTORED
from
wendelin.lib.mem
import
bzero
,
memcpy
from
wendelin.lib.mem
import
bzero
,
memcpy
from
wendelin.lib.zodb
import
deactivate_btree
from
wendelin.lib.zodb
import
LivePersistent
,
deactivate_btree
from
transaction.interfaces
import
IDataManager
,
ISynchronizer
from
transaction.interfaces
import
IDataManager
,
ISynchronizer
from
persistent
import
Persistent
,
PickleCache
,
GHOST
from
persistent
import
Persistent
,
PickleCache
,
GHOST
...
@@ -482,33 +482,6 @@ class _ZBigFile(BigFile):
...
@@ -482,33 +482,6 @@ class _ZBigFile(BigFile):
# Persistent that never goes to ghost state, if it was ever uptodate.
#
# NOTE
#
# On invalidation LivePersistent still goes to ghost state, because
# invalidation cannot be ignored, i.e. they indicate the object has been
# changed externally.
#
# Invalidation can happen only at transaction boundary, so during the course of
# transaction LivePersistent is guaranteed to stay uptodate.
#
# XXX move to common place?
class
LivePersistent
(
Persistent
):
# don't allow us to go to ghost
#
# NOTE we can't use STICKY as that state is assumed as
# short-lived-temporary by ZODB and is changed back to UPTODATE by
# persistent code. In fact ZODB says: STICKY is UPTODATE+keep in memory.
def
_p_deactivate
(
self
):
# just returning here won't allow Persistent._p_deactivate() run and
# thus we'll stay in non-ghost state.
return
# NOTE _p_invalidate() is triggered on invalidations. We do not override it.
# ZBigFile implements BigFile backend with data stored in ZODB.
# ZBigFile implements BigFile backend with data stored in ZODB.
#
#
# NOTE Can't inherit from Persistent and BigFile at the same time - both are C
# NOTE Can't inherit from Persistent and BigFile at the same time - both are C
...
...
bigfile/tests/test_filezodb.py
View file @
c02776e9
...
@@ -17,12 +17,13 @@
...
@@ -17,12 +17,13 @@
#
#
# See COPYING file for full licensing terms.
# See COPYING file for full licensing terms.
# See https://www.nexedi.com/licensing for rationale and options.
# See https://www.nexedi.com/licensing for rationale and options.
from
wendelin.bigfile.file_zodb
import
LivePersistent
,
ZBigFile
,
ZBlk_fmt_registry
from
wendelin.bigfile.file_zodb
import
ZBigFile
,
ZBlk_fmt_registry
from
wendelin.bigfile
import
file_zodb
,
ram_reclaim
from
wendelin.bigfile
import
file_zodb
,
ram_reclaim
from
wendelin.bigfile.tests.test_thread
import
NotifyChannel
from
wendelin.bigfile.tests.test_thread
import
NotifyChannel
from
wendelin.lib.zodb
import
dbclose
from
wendelin.lib.zodb
import
LivePersistent
,
dbclose
from
wendelin.lib.tests.test_zodb
import
cacheInfo
,
kkey
from
wendelin.lib.testing
import
getTestDB
from
wendelin.lib.testing
import
getTestDB
from
persistent
import
UPTODATE
,
GHOST
,
CHANGED
from
persistent
import
UPTODATE
import
transaction
import
transaction
from
transaction
import
TransactionManager
from
transaction
import
TransactionManager
from
ZODB.POSException
import
ConflictError
from
ZODB.POSException
import
ConflictError
...
@@ -68,149 +69,6 @@ def ram_reclaim_all():
...
@@ -68,149 +69,6 @@ def ram_reclaim_all():
return
reclaimed
return
reclaimed
# like db.cacheDetail(), but {} instead of []
def
cacheInfo
(
db
):
return
dict
(
db
.
cacheDetail
())
# key for cacheInfo() result
def
kkey
(
klass
):
return
'%s.%s'
%
(
klass
.
__module__
,
klass
.
__name__
)
@
func
def
test_livepersistent
():
root
=
dbopen
()
transaction
.
commit
()
# set root._p_jar
db
=
root
.
_p_jar
.
db
()
# ~~~ test `obj initially created` case
root
[
'live'
]
=
lp
=
LivePersistent
()
assert
lp
.
_p_jar
is
None
# connection does not know about it yet
assert
lp
.
_p_state
==
UPTODATE
# object initially created in uptodate
# should not be in cache yet & thus should stay after gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
kkey
(
LivePersistent
)
not
in
ci
# should be registered to connection & cache after commit
transaction
.
commit
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# should stay that way after cache gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# ~~~ reopen & test `obj loaded from db` case
dbclose
(
root
)
del
root
,
db
,
lp
root
=
dbopen
()
db
=
root
.
_p_jar
.
db
()
# known to connection & cache & GHOST
# right after first loading from DB
lp
=
root
[
'live'
]
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
is
GHOST
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# should be UPTODATE for sure after read access
getattr
(
lp
,
'attr'
,
None
)
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
is
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# does not go back to ghost on cache gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# ok
dbclose
(
root
)
del
root
,
db
,
lp
# demo that upon cache invalidation LivePersistent can go back to ghost
root
=
dbopen
()
conn
=
root
.
_p_jar
db
=
conn
.
db
()
conn
.
close
()
del
root
,
conn
tm1
=
TransactionManager
()
tm2
=
TransactionManager
()
conn1
=
db
.
open
(
transaction_manager
=
tm1
)
root1
=
conn1
.
root
()
defer
(
lambda
:
dbclose
(
root1
))
lp1
=
root1
[
'live'
]
conn2
=
db
.
open
(
transaction_manager
=
tm2
)
root2
=
conn2
.
root
()
defer
(
conn2
.
close
)
lp2
=
root2
[
'live'
]
# 2 connections are setup running in parallel with initial obj state as ghost
assert
lp1
.
_p_jar
is
conn1
assert
lp2
.
_p_jar
is
conn2
assert
lp1
.
_p_state
is
GHOST
assert
lp2
.
_p_state
is
GHOST
# conn1: modify ghost -> changed
lp1
.
attr
=
1
assert
lp1
.
_p_state
is
CHANGED
assert
lp2
.
_p_state
is
GHOST
# conn2: read ghost -> uptodate
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
assert
getattr
(
lp2
,
'attr'
,
None
)
is
None
assert
lp1
.
_p_state
is
CHANGED
assert
lp2
.
_p_state
is
UPTODATE
# conn1: commit changed -> uptodate; conn2 untouched
tm1
.
commit
()
assert
lp1
.
_p_state
is
UPTODATE
assert
lp2
.
_p_state
is
UPTODATE
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
assert
getattr
(
lp2
,
'attr'
,
None
)
is
None
# conn2: commit (nothing changed - just transaction boundary)
# uptodate -> ghost (invalidation)
tm2
.
commit
()
assert
lp1
.
_p_state
is
UPTODATE
assert
lp2
.
_p_state
is
GHOST
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
# conn2: after reading, the state is again uptodate + changes from conn1 are here
a
=
getattr
(
lp2
,
'attr'
,
None
)
assert
lp2
.
_p_state
is
UPTODATE
assert
a
==
1
del
conn2
,
root2
# i'th memory block as u32 ndarray
# i'th memory block as u32 ndarray
blksize32
=
blksize
//
4
blksize32
=
blksize
//
4
def
Blk
(
vma
,
i
):
def
Blk
(
vma
,
i
):
...
...
lib/tests/test_zodb.py
View file @
c02776e9
...
@@ -17,11 +17,12 @@
...
@@ -17,11 +17,12 @@
#
#
# See COPYING file for full licensing terms.
# See COPYING file for full licensing terms.
# See https://www.nexedi.com/licensing for rationale and options.
# See https://www.nexedi.com/licensing for rationale and options.
from
wendelin.lib.zodb
import
deactivate_btree
,
dbclose
from
wendelin.lib.zodb
import
LivePersistent
,
deactivate_btree
,
dbclose
from
wendelin.lib.testing
import
getTestDB
from
wendelin.lib.testing
import
getTestDB
from
persistent
import
Persistent
,
UPTODATE
,
GHOST
from
persistent
import
Persistent
,
UPTODATE
,
GHOST
,
CHANGED
from
BTrees.IOBTree
import
IOBTree
from
BTrees.IOBTree
import
IOBTree
import
transaction
import
transaction
from
transaction
import
TransactionManager
from
golang
import
defer
,
func
from
golang
import
defer
,
func
import
gc
import
gc
...
@@ -38,6 +39,146 @@ def setup_module():
...
@@ -38,6 +39,146 @@ def setup_module():
def
teardown_module
():
def
teardown_module
():
testdb
.
teardown
()
testdb
.
teardown
()
# like db.cacheDetail(), but {} instead of []
def
cacheInfo
(
db
):
return
dict
(
db
.
cacheDetail
())
# key for cacheInfo() result
def
kkey
(
klass
):
return
'%s.%s'
%
(
klass
.
__module__
,
klass
.
__name__
)
@
func
def
test_livepersistent
():
root
=
dbopen
()
transaction
.
commit
()
# set root._p_jar
db
=
root
.
_p_jar
.
db
()
# ~~~ test `obj initially created` case
root
[
'live'
]
=
lp
=
LivePersistent
()
assert
lp
.
_p_jar
is
None
# connection does not know about it yet
assert
lp
.
_p_state
==
UPTODATE
# object initially created in uptodate
# should not be in cache yet & thus should stay after gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
kkey
(
LivePersistent
)
not
in
ci
# should be registered to connection & cache after commit
transaction
.
commit
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# should stay that way after cache gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# ~~~ reopen & test `obj loaded from db` case
dbclose
(
root
)
del
root
,
db
,
lp
root
=
dbopen
()
db
=
root
.
_p_jar
.
db
()
# known to connection & cache & GHOST
# right after first loading from DB
lp
=
root
[
'live'
]
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
is
GHOST
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# should be UPTODATE for sure after read access
getattr
(
lp
,
'attr'
,
None
)
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
is
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# does not go back to ghost on cache gc
db
.
cacheMinimize
()
assert
lp
.
_p_jar
is
not
None
assert
lp
.
_p_state
==
UPTODATE
ci
=
cacheInfo
(
db
)
assert
ci
[
kkey
(
LivePersistent
)]
==
1
# ok
dbclose
(
root
)
del
root
,
db
,
lp
# demo that upon cache invalidation LivePersistent can go back to ghost
root
=
dbopen
()
conn
=
root
.
_p_jar
db
=
conn
.
db
()
conn
.
close
()
del
root
,
conn
tm1
=
TransactionManager
()
tm2
=
TransactionManager
()
conn1
=
db
.
open
(
transaction_manager
=
tm1
)
root1
=
conn1
.
root
()
defer
(
lambda
:
dbclose
(
root1
))
lp1
=
root1
[
'live'
]
conn2
=
db
.
open
(
transaction_manager
=
tm2
)
root2
=
conn2
.
root
()
defer
(
conn2
.
close
)
lp2
=
root2
[
'live'
]
# 2 connections are setup running in parallel with initial obj state as ghost
assert
lp1
.
_p_jar
is
conn1
assert
lp2
.
_p_jar
is
conn2
assert
lp1
.
_p_state
is
GHOST
assert
lp2
.
_p_state
is
GHOST
# conn1: modify ghost -> changed
lp1
.
attr
=
1
assert
lp1
.
_p_state
is
CHANGED
assert
lp2
.
_p_state
is
GHOST
# conn2: read ghost -> uptodate
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
assert
getattr
(
lp2
,
'attr'
,
None
)
is
None
assert
lp1
.
_p_state
is
CHANGED
assert
lp2
.
_p_state
is
UPTODATE
# conn1: commit changed -> uptodate; conn2 untouched
tm1
.
commit
()
assert
lp1
.
_p_state
is
UPTODATE
assert
lp2
.
_p_state
is
UPTODATE
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
assert
getattr
(
lp2
,
'attr'
,
None
)
is
None
# conn2: commit (nothing changed - just transaction boundary)
# uptodate -> ghost (invalidation)
tm2
.
commit
()
assert
lp1
.
_p_state
is
UPTODATE
assert
lp2
.
_p_state
is
GHOST
assert
getattr
(
lp1
,
'attr'
,
None
)
==
1
# conn2: after reading, the state is again uptodate + changes from conn1 are here
a
=
getattr
(
lp2
,
'attr'
,
None
)
assert
lp2
.
_p_state
is
UPTODATE
assert
a
==
1
del
conn2
,
root2
class
XInt
(
Persistent
):
class
XInt
(
Persistent
):
def
__init__
(
self
,
i
):
def
__init__
(
self
,
i
):
...
...
lib/zodb.py
View file @
c02776e9
...
@@ -79,6 +79,31 @@ def dbclose(root):
...
@@ -79,6 +79,31 @@ def dbclose(root):
stor
.
close
()
stor
.
close
()
# LivePersistent is Persistent that never goes to ghost state, if it was ever uptodate.
#
# NOTE
#
# On invalidation LivePersistent still goes to ghost state, because
# invalidation cannot be ignored, i.e. they indicate the object has been
# changed externally.
#
# Invalidation can happen only at transaction boundary, so during the course of
# transaction LivePersistent is guaranteed to stay uptodate.
class
LivePersistent
(
Persistent
):
# don't allow us to go to ghost
#
# NOTE we can't use STICKY as that state is assumed as
# short-lived-temporary by ZODB and is changed back to UPTODATE by
# persistent code. In fact ZODB says: STICKY is UPTODATE+keep in memory.
def
_p_deactivate
(
self
):
# just returning here won't allow Persistent._p_deactivate() run and
# thus we'll stay in non-ghost state.
return
# NOTE _p_invalidate() is triggered on invalidations. We do not override it.
# deactivate a btree, including all internal buckets and leaf nodes
# deactivate a btree, including all internal buckets and leaf nodes
def
deactivate_btree
(
btree
):
def
deactivate_btree
(
btree
):
# first activate btree, to make sure its first bucket is loaded at all.
# first activate btree, to make sure its first bucket is loaded at all.
...
...
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