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Kirill Smelkov
cython
Commits
2e927419
Commit
2e927419
authored
Sep 23, 2012
by
Mark Florisson
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Plain Diff
Error checking for NULL strides + tests
parent
bf1aa4e4
Changes
2
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2 changed files
with
154 additions
and
34 deletions
+154
-34
Cython/Utility/MemoryView_C.c
Cython/Utility/MemoryView_C.c
+54
-34
tests/memoryview/numpy_memoryview.pyx
tests/memoryview/numpy_memoryview.pyx
+100
-0
No files found.
Cython/Utility/MemoryView_C.c
View file @
2e927419
...
@@ -207,30 +207,48 @@ static int __Pyx_ValidateAndInit_memviewslice(
...
@@ -207,30 +207,48 @@ static int __Pyx_ValidateAndInit_memviewslice(
goto
fail
;
goto
fail
;
}
}
for
(
i
=
0
;
i
<
ndim
;
i
++
)
{
for
(
i
=
0
;
i
<
ndim
;
i
++
)
{
spec
=
axes_specs
[
i
];
spec
=
axes_specs
[
i
];
if
(
spec
&
__Pyx_MEMVIEW_CONTIG
)
{
if
(
buf
->
strides
)
{
if
(
spec
&
(
__Pyx_MEMVIEW_PTR
|
__Pyx_MEMVIEW_FULL
))
{
if
(
spec
&
__Pyx_MEMVIEW_CONTIG
)
{
if
(
buf
->
strides
[
i
]
!=
sizeof
(
void
*
))
{
if
(
spec
&
(
__Pyx_MEMVIEW_PTR
|
__Pyx_MEMVIEW_FULL
))
{
PyErr_Format
(
PyExc_ValueError
,
if
(
buf
->
strides
[
i
]
!=
sizeof
(
void
*
))
{
"Buffer is not indirectly contiguous in dimension %d."
,
i
);
PyErr_Format
(
PyExc_ValueError
,
"Buffer is not indirectly contiguous in dimension %d."
,
i
);
goto
fail
;
}
}
else
if
(
buf
->
strides
[
i
]
!=
buf
->
itemsize
)
{
PyErr_SetString
(
PyExc_ValueError
,
"Buffer and memoryview are not contiguous in the same dimension."
);
goto
fail
;
goto
fail
;
}
}
}
else
if
(
buf
->
strides
[
i
]
!=
buf
->
itemsize
)
{
PyErr_SetString
(
PyExc_ValueError
,
"Buffer and memoryview are not contiguous in the same dimension."
);
goto
fail
;
}
}
}
if
(
spec
&
__Pyx_MEMVIEW_FOLLOW
)
{
if
(
spec
&
__Pyx_MEMVIEW_FOLLOW
)
{
Py_ssize_t
stride
=
buf
->
strides
[
i
];
Py_ssize_t
stride
=
buf
->
strides
[
i
];
if
(
stride
<
0
)
if
(
stride
<
0
)
stride
=
-
stride
;
stride
=
-
stride
;
if
(
stride
<
buf
->
itemsize
)
{
if
(
stride
<
buf
->
itemsize
)
{
PyErr_SetString
(
PyExc_ValueError
,
"Buffer and memoryview are not contiguous in the same dimension."
);
goto
fail
;
}
}
}
else
{
if
(
spec
&
__Pyx_MEMVIEW_CONTIG
&&
i
!=
ndim
-
1
)
{
PyErr_Format
(
PyExc_ValueError
,
"C-contiguous buffer is not contiguous in "
"dimension %d"
,
i
);
goto
fail
;
}
else
if
(
spec
&
(
__Pyx_MEMVIEW_PTR
))
{
PyErr_Format
(
PyExc_ValueError
,
"C-contiguous buffer is not indirect in "
"dimension %d"
,
i
);
goto
fail
;
}
else
if
(
buf
->
suboffsets
)
{
PyErr_SetString
(
PyExc_ValueError
,
PyErr_SetString
(
PyExc_ValueError
,
"Buffer and memoryview are not contiguous in the same dimension.
"
);
"Buffer exposes suboffsets but no strides
"
);
goto
fail
;
goto
fail
;
}
}
}
}
...
@@ -254,25 +272,27 @@ static int __Pyx_ValidateAndInit_memviewslice(
...
@@ -254,25 +272,27 @@ static int __Pyx_ValidateAndInit_memviewslice(
}
}
}
}
if
(
c_or_f_flag
&
__Pyx_IS_F_CONTIG
)
{
if
(
buf
->
strides
)
{
Py_ssize_t
stride
=
1
;
if
(
c_or_f_flag
&
__Pyx_IS_F_CONTIG
)
{
for
(
i
=
0
;
i
<
ndim
;
i
++
)
{
Py_ssize_t
stride
=
1
;
if
(
stride
*
buf
->
itemsize
!=
buf
->
strides
[
i
])
{
for
(
i
=
0
;
i
<
ndim
;
i
++
)
{
PyErr_SetString
(
PyExc_ValueError
,
if
(
stride
*
buf
->
itemsize
!=
buf
->
strides
[
i
])
{
"Buffer not fortran contiguous."
);
PyErr_SetString
(
PyExc_ValueError
,
goto
fail
;
"Buffer not fortran contiguous."
);
goto
fail
;
}
stride
=
stride
*
buf
->
shape
[
i
];
}
}
stride
=
stride
*
buf
->
shape
[
i
];
}
else
if
(
c_or_f_flag
&
__Pyx_IS_C_CONTIG
)
{
}
Py_ssize_t
stride
=
1
;
}
else
if
(
c_or_f_flag
&
__Pyx_IS_C_CONTIG
)
{
for
(
i
=
ndim
-
1
;
i
>-
1
;
i
--
)
{
Py_ssize_t
stride
=
1
;
if
(
stride
*
buf
->
itemsize
!=
buf
->
strides
[
i
])
{
for
(
i
=
ndim
-
1
;
i
>-
1
;
i
--
)
{
PyErr_SetString
(
PyExc_ValueError
,
if
(
stride
*
buf
->
itemsize
!=
buf
->
strides
[
i
])
{
"Buffer not C contiguous."
);
PyErr_SetString
(
PyExc_ValueError
,
goto
fail
;
"Buffer not C contiguous."
);
}
goto
fail
;
stride
=
stride
*
buf
->
shape
[
i
]
;
}
}
stride
=
stride
*
buf
->
shape
[
i
];
}
}
}
}
...
...
tests/memoryview/numpy_memoryview.pyx
View file @
2e927419
...
@@ -10,6 +10,7 @@ import sys
...
@@ -10,6 +10,7 @@ import sys
cimport
numpy
as
np
cimport
numpy
as
np
import
numpy
as
np
import
numpy
as
np
cimport
cython
cimport
cython
from
cython
cimport
view
include
"cythonarrayutil.pxi"
include
"cythonarrayutil.pxi"
include
"../buffers/mockbuffers.pxi"
include
"../buffers/mockbuffers.pxi"
...
@@ -568,3 +569,102 @@ def test_struct_attributes():
...
@@ -568,3 +569,102 @@ def test_struct_attributes():
print
array
[
0
][
'attrib1'
]
print
array
[
0
][
'attrib1'
]
print
array
[
0
][
'attrib2'
]
print
array
[
0
][
'attrib2'
]
print
chr
(
array
[
0
][
'attrib3'
][
'c'
][
0
][
0
])
print
chr
(
array
[
0
][
'attrib3'
][
'c'
][
0
][
0
])
#
### Test for NULL strides (C contiguous buffers)
#
cdef
getbuffer
(
Buffer
self
,
Py_buffer
*
info
):
info
.
buf
=
&
self
.
m
[
0
,
0
]
info
.
len
=
10
*
20
info
.
ndim
=
2
info
.
shape
=
self
.
_shape
info
.
strides
=
NULL
info
.
suboffsets
=
NULL
info
.
itemsize
=
4
info
.
readonly
=
0
self
.
format
=
b"f"
info
.
format
=
self
.
format
cdef
class
Buffer
(
object
):
cdef
Py_ssize_t
_shape
[
2
]
cdef
bytes
format
cdef
float
[:,
:]
m
cdef
object
shape
,
strides
def
__init__
(
self
):
a
=
np
.
arange
(
200
,
dtype
=
np
.
float32
).
reshape
(
10
,
20
)
self
.
m
=
a
self
.
shape
=
a
.
shape
self
.
strides
=
a
.
strides
self
.
_shape
[
0
]
=
10
self
.
_shape
[
1
]
=
20
def
__getbuffer__
(
self
,
Py_buffer
*
info
,
int
flags
):
getbuffer
(
self
,
info
)
cdef
class
SuboffsetsNoStridesBuffer
(
Buffer
):
def
__getbuffer__
(
self
,
Py_buffer
*
info
,
int
flags
):
getbuffer
(
self
,
info
)
info
.
suboffsets
=
self
.
_shape
@
testcase
def
test_null_strides
(
Buffer
buffer_obj
):
"""
>>> test_null_strides(Buffer())
"""
cdef
float
[:,
:]
m1
=
buffer_obj
cdef
float
[:,
::
1
]
m2
=
buffer_obj
cdef
float
[:,
::
view
.
contiguous
]
m3
=
buffer_obj
assert
(
<
object
>
m1
).
strides
==
buffer_obj
.
strides
assert
(
<
object
>
m2
).
strides
==
buffer_obj
.
strides
,
((
<
object
>
m2
).
strides
,
buffer_obj
.
strides
)
assert
(
<
object
>
m3
).
strides
==
buffer_obj
.
strides
cdef
int
i
,
j
for
i
in
range
(
m1
.
shape
[
0
]):
for
j
in
range
(
m1
.
shape
[
1
]):
assert
m1
[
i
,
j
]
==
buffer_obj
.
m
[
i
,
j
]
assert
m2
[
i
,
j
]
==
buffer_obj
.
m
[
i
,
j
],
(
i
,
j
,
m2
[
i
,
j
],
buffer_obj
.
m
[
i
,
j
])
assert
m3
[
i
,
j
]
==
buffer_obj
.
m
[
i
,
j
]
@
testcase
def
test_null_strides_error
(
buffer_obj
):
"""
>>> test_null_strides_error(Buffer())
C-contiguous buffer is not indirect in dimension 1
C-contiguous buffer is not indirect in dimension 0
C-contiguous buffer is not contiguous in dimension 0
C-contiguous buffer is not contiguous in dimension 0
>>> test_null_strides_error(SuboffsetsNoStridesBuffer())
Traceback (most recent call last):
...
ValueError: Buffer exposes suboffsets but no strides
"""
# valid
cdef
float
[::
view
.
generic
,
::
view
.
generic
]
full_buf
=
buffer_obj
# invalid
cdef
float
[:,
::
view
.
indirect
]
indirect_buf1
cdef
float
[::
view
.
indirect
,
:]
indirect_buf2
cdef
float
[::
1
,
:]
fortran_buf1
cdef
float
[::
view
.
contiguous
,
:]
fortran_buf2
try
:
indirect_buf1
=
buffer_obj
except
ValueError
,
e
:
print
e
try
:
indirect_buf2
=
buffer_obj
except
ValueError
,
e
:
print
e
try
:
fortran_buf1
=
buffer_obj
except
ValueError
,
e
:
print
e
try
:
fortran_buf2
=
buffer_obj
except
ValueError
,
e
:
print
e
\ No newline at end of file
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