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The reason of this valgrind's compaint is not a bug but rather a feature of bitwise ops: for any value of the byte x x | 1 -> 1, and x & 0 -> 0. x, being a null_byte part of record[1] can be left unassigned even after ha_innobase::index_read_idx because the above and still be correct. Addding a check memory upon the invocation of the function can detect this fact long before record[1], old record, is eventually passed to my_write. Fixed with initialization of record[1]'s null_bytes part in open_table_from_share.
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