MDEV-7038 Assertion `status_var.memory_used == 0' failed in THD::~THD() on disconnect after executing EXPLAIN for multi-table UPDATE

Added test case that caught this bug. It is no longer reproducible in
the current tree.

Problem was that std::vector was allocated using calloc instead of
new, this caused vector constructor not being called and vector
metadata not initialized.

Backport into 10.0

The slave SQL thread was clearing serial_rgi->thd before deleting
serial_rgi, which could cause access to NULL THD.

The clearing was introduced in commit
2e100cc5 and is just plain wrong. So revert
that part (single line) of that commit.

Thanks to Daniel Black for bug analysis and test case.

MDEV-7130: MASTER_POS_WAIT(log_name,log_pos,timeout,"connection_name") hangs, does not respect the timeout

Changed also arg_count check for connection_name to prevent same bug
if fifth argument is introduced in future

MDEV-8031: Parallel replication stops on "connection killed" error (probably incorrectly handled deadlock kill)

There was a rare race, where a deadlock error might not be correctly
handled, causing the slave to stop with something like this in the error
log:

150423 14:04:10 [ERROR] Slave SQL: Connection was killed, Gtid 0-1-2, Internal MariaDB error code: 1927
150423 14:04:10 [Warning] Slave: Connection was killed Error_code: 1927
150423 14:04:10 [Warning] Slave: Deadlock found when trying to get lock; try restarting transaction Error_code: 1213
150423 14:04:10 [Warning] Slave: Connection was killed Error_code: 1927
150423 14:04:10 [Warning] Slave: Connection was killed Error_code: 1927
150423 14:04:10 [ERROR] Error running query, slave SQL thread aborted. Fix the problem, and restart the slave SQL thread with "SLAVE START". We stopped at log 'master-bin.000001 position 1234

The problem was incorrect error handling. When a deadlock is detected, it
causes a KILL CONNECTION on the offending thread. This error is then later
converted to a deadlock error, and the transaction is retried.

However, the deadlock error was not cleared at the start of the retry, nor
was the lingering kill signal. So it was possible to get another deadlock
kill early during retry. If this happened with particular thread
scheduling/timing, it was possible that the new KILL CONNECTION error was
masked by the earlier deadlock error, so that the second kill was not
properly converted into a deadlock error and retry.

This patch adds code that clears the old error and killed flag before
starting the retry. It also adds code to handle a deadlock kill caught in a
couple of places where it was not handled before.

Fix a silly typo that caused the test to occasionally fail.

This was a regression from the patch for MDEV-7668.

A test was incorrect, so the slave would not properly handle re-using
temporary tables, which lead to replication failure in this case.

Add some suppressions that were missing. They are for if a STOP SLAVE is
executed early during IO thread startup, when it is negotiating with the
master. The master connection may be killed in the middle of a
mysql_real_query(), which is not a test failure if it is a network error.

This also caught one real code error, fixed with this commit: The I/O thread
would fail to automatically reconnect if a network error happened while
fetching the value of @@GLOBAL.gtid_domain_id.

Conflicts:
	sql/sql_base.cc

MDEV-7936: Assertion `!table || table->in_use == _current_thd()' failed on parallel replication in optimistic mode

Make sure that in parallel replication, we execute wait_for_prior_commit()
before setting table->in_use for a temporary table. Otherwise we can end up
with two parallel replication worker threads competing with each other for
use of a temporary table.

Re-factor the use of find_temporary_table() to be able to handle errors
in the caller (as wait_for_prior_commit() can return error in case of
deadlock kill).

MDEV-7668: Intermediate master groups CREATE TEMPORARY with INSERT, causing parallel replication failure

[This commit cherry-picked to be able to merge MDEV-7936, of which it
is a pre-requisite, into both 10.0 and 10.1.]

Parallel replication depends on locking (table locks, row locks, etc.) to
prevent two conflicting transactions from running and committing in parallel.
But temporary tables are designed to be visible only to one thread, and have
no such locking.

In the concrete issue, an intermediate master could commit a CREATE TEMPORARY
TABLE in the same group commit as in INSERT into that table. Thus, a
lower-level master could attempt to run them in parallel and get an error.

More generally, we need protection from parallel replication trying to run
transactions in parallel that access a common temporary table.

This patch simply causes use of a temporary table from parallel replication
to wait for all previous transactions to commit, serialising the replication
at that point.

(A more fine-grained locking could be added later, possibly. However,
using temporary tables in statement-based replication is in any case
normally undesirable; for example a restart of the server will lose
temporary tables and can break replication).

Note that row-based replication is not affected, as it does not do any
temporary tables on the slave-side.

This patch also cleans up the locking around protecting the list of
temporary tables in Relay_log_info. This used to take the
rli->data_lock at the end of every statement, which is very bad for
concurrency. With this patch, the lock is not taken unless temporary
tables (with statement-based binlogging) are in use on the slave.

Fix a race in the test case. When we do start_slave.inc immediately
followed by stop_slave.inc, it is possible to kill the IO thread while
it is still running inside get_master_version_and_clock(), and this
gives warnings in the error log that cause the test to fail.

The test case was missing --source include/wait_for_binlog_checkpoint.inc.
So it could occasionally fail if the checkpoint managed to occur just at the
right point in time between fetching the two binlog positions to compare.

The hangs occur when the group_commit_orderer object is freed before the last
mark_start_commit() call on it - this loses the wakeup to other waiting worker
threads, causing them to hang until killed manually.

The object was freed because wakeup_subsequent_commits() was called two early
in two places. For MDEV-7888, during ANALYZE TABLE, and for MDEV-7929 during
record_gtid() after processing a DDL event. The group_commit_orderer object
can be freed when its last transaction has called wait_for_prior_commit().

Fix by implementing a suspend/resume mechanism for wakeup_subsequent_commits()
that can be used in places where a transaction is committed without this being
the commit of the actual replication event group.

Also add a protection mechanism (that asserts in debug builds) which can
prevent the too-early free and hang if other similar bugs should remain in
other parts of the code.

Problem was that in XA prepared state we should still be able to
release a savepoint, but assertions were too strict.

Analysis: MySQL table definition contains also virtual columns. Similarly,
index fielnr references MySQL table fields. However, InnoDB table definition
does not contain virtual columns. Therefore, when matching MySQL key fieldnr
we need to use actual column name to find out referenced InnoDB dictionary
column name.

Fix: Add new function to match MySQL index key columns to InnoDB dictionary.

Replace static array of thread sync levels with std::vector.

Conflicts:
	mysql-test/suite/rpl/r/rpl_parallel.result
	mysql-test/suite/rpl/t/rpl_parallel.test

MDEV-7847: "Slave worker thread retried transaction 10 time(s) in vain, giving up", followed by replication hanging

This patch fixes a bug in the error handling in parallel replication, when one
worker thread gets a failure and other worker threads processing later
transactions have to rollback and abort.

The problem was with the lifetime of group_commit_orderer objects (GCOs).
A GCO is freed when we register that its last event group has committed. This
relies on register_wait_for_prior_commit() and wait_for_prior_commit() to
ensure that the fact that T2 has committed implies that any earlier T1 has
also committed, and can thus no longer execute mark_start_commit().

However, in the error case, the code was skipping the
register_wait_for_prior_commit() and wait_for_prior_commit() calls. Thus
commit ordering was not guaranteed, and a GCO could be freed too early. Then a
later mark_start_commit() would reference deallocated GCO, which could lead to
lost wakeup (causing slave threads to hang) or other corruption.

This patch makes also the error case respect commit order. This way, also the
error case gets the GCO lifetime correct, and the hang no longer occurs.

When a transaction in parallel replication needs to retry (eg. because of
deadlock kill), first wait for all prior transactions to commit before doing
the retry. This way, we avoid the retry once again conflicting with a prior
transaction, requiring yet another retry.

Without this patch, we saw "in the wild" that transactions had to be retried
more than 10 times to succeed, which exceeds the default
--slave_transaction_retries value and is in any case undesirable.

(We already do this in 10.1 in "optimistic" parallel replication mode; this
patch just makes the code use the same logic for "conservative" mode (only
mode in 10.0)).

Fix BigEndian build for Cassandra SE

There is a bug in Visual Studio 2010
Visual Studio has a feature "Checked Iterators". In a debug build, every
iterator operation is checked at runtime for errors, e g, out of range.
Disable this "Checked Iterators" for Windows and Debug if defined.

Problem was that static array was used for storing thread mutex sync levels.
Fixed by using std::vector instead.

Does not contain test case to avoid too big memory/disk space usage
on buildbot VMs.

Parallel replication (in 10.0 / "conservative" mode) relies on binlog group
commits to group transactions that can be safely run in parallel on the
slave. The --binlog-commit-wait-count and --binlog-commit-wait-usec options
exist to increase the number of commits per group. But in case of conflicts
between transactions, this can cause unnecessary delay and reduced througput,
especially on a slave where commit order is fixed.

This patch adds a heuristics to reduce this problem. When transaction T1 goes
to commit, it will first wait for N transactions to queue up for a group
commit. However, if we detect that another transaction T2 is waiting for a row
lock held by T1, then we will skip the wait and let T1 commit immediately,
releasing locks and let T2 continue.

On a slave, this avoids the unfortunate situation where T1 is waiting for T2
to join the group commit, but T2 is waiting for T1 to release locks, causing
no work to be done for the duration of the --binlog-commit-wait-usec timeout.

(The heuristic seems reasonable on the master as well, so it is enabled for
all transactions, not just replication transactions).

A contribution from Daniel Black, with minor additional enhancements.

type storage engine.

Authored by: Kentoku Shiba

Delay spawning parallel replication worker threads until a slave SQL
thread is running, and de-spawn them when the last SQL thread stops.

This is especially useful to avoid needless threads on a master in a
setup where same my.cnf is used on masters and slaves.

available space on disk

Add error handling when disk full situation happens and
intentionally bring server down with stacktrace because
on all cases InnoDB can't continue anyway.

Extend show_slave_status.inc to run SHOW ALL SLAVES STATUS and
SHOW SLAVE 'name' STATUS on demand, and make the test use
the include file instead of direct SHOW statements