[Rails5] Bump Rails to 5.0.7 and set `atomic` to 1.1.99

atomic 1.1.100 was yanked by its author.

Gemfile

@@ -6,7 +6,7 @@ end
 gem_versions = {}
 gem_versions['activerecord_sane_schema_dumper'] = rails5? ? '1.0'      : '0.2'
 gem_versions['default_value_for']               = rails5? ? '~> 3.0.5' : '~> 3.0.0'
-gem_versions['rails']                           = rails5? ? '5.0.6'    : '4.2.10'
+gem_versions['rails']                           = rails5? ? '5.0.7'    : '4.2.10'
 gem_versions['rails-i18n']                      = rails5? ? '~> 5.1'   : '~> 4.0.9'
 # --- The end of special code for migrating to Rails 5.0 ---
 

Gemfile.rails5.lock

@@ -4,43 +4,43 @@ GEM
     RedCloth (4.3.2)
     abstract_type (0.0.7)
     ace-rails-ap (4.1.4)
-    actioncable (5.0.6)
-      actionpack (= 5.0.6)
+    actioncable (5.0.7)
+      actionpack (= 5.0.7)
       nio4r (>= 1.2, < 3.0)
       websocket-driver (~> 0.6.1)
-    actionmailer (5.0.6)
-      actionpack (= 5.0.6)
-      actionview (= 5.0.6)
-      activejob (= 5.0.6)
+    actionmailer (5.0.7)
+      actionpack (= 5.0.7)
+      actionview (= 5.0.7)
+      activejob (= 5.0.7)
       mail (~> 2.5, >= 2.5.4)
       rails-dom-testing (~> 2.0)
-    actionpack (5.0.6)
-      actionview (= 5.0.6)
-      activesupport (= 5.0.6)
+    actionpack (5.0.7)
+      actionview (= 5.0.7)
+      activesupport (= 5.0.7)
       rack (~> 2.0)
       rack-test (~> 0.6.3)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.0, >= 1.0.2)
-    actionview (5.0.6)
-      activesupport (= 5.0.6)
+    actionview (5.0.7)
+      activesupport (= 5.0.7)
       builder (~> 3.1)
       erubis (~> 2.7.0)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.0, >= 1.0.3)
-    activejob (5.0.6)
-      activesupport (= 5.0.6)
+    activejob (5.0.7)
+      activesupport (= 5.0.7)
       globalid (>= 0.3.6)
-    activemodel (5.0.6)
-      activesupport (= 5.0.6)
-    activerecord (5.0.6)
-      activemodel (= 5.0.6)
-      activesupport (= 5.0.6)
+    activemodel (5.0.7)
+      activesupport (= 5.0.7)
+    activerecord (5.0.7)
+      activemodel (= 5.0.7)
+      activesupport (= 5.0.7)
       arel (~> 7.0)
     activerecord_sane_schema_dumper (1.0)
       rails (>= 5, < 6)
-    activesupport (5.0.6)
+    activesupport (5.0.7)
       concurrent-ruby (~> 1.0, >= 1.0.2)
-      i18n (~> 0.7)
+      i18n (>= 0.7, < 2)
       minitest (~> 5.1)
       tzinfo (~> 1.1)
     acts-as-taggable-on (5.0.0)
@@ -62,13 +62,13 @@ GEM
     asciidoctor (1.5.6.1)
     asciidoctor-plantuml (0.0.8)
       asciidoctor (~> 1.5)
-    asset_sync (2.2.0)
+    asset_sync (2.4.0)
       activemodel (>= 4.1.0)
       fog-core
       mime-types (>= 2.99)
       unf
     ast (2.4.0)
-    atomic (1.1.100)
+    atomic (1.1.99)
     attr_encrypted (3.1.0)
       encryptor (~> 3.0.0)
     attr_required (1.0.1)
@@ -144,12 +144,10 @@ GEM
     connection_pool (2.2.1)
     crack (0.4.3)
       safe_yaml (~> 1.0.0)
-    crass (1.0.3)
+    crass (1.0.4)
     creole (0.5.0)
     css_parser (1.6.0)
       addressable
-    d3_rails (3.5.17)
-      railties (>= 3.1.0)
     daemons (1.2.6)
     database_cleaner (1.5.3)
     debug_inspector (0.0.3)
@@ -292,7 +290,7 @@ GEM
       po_to_json (>= 1.0.0)
       rails (>= 3.2.0)
     gherkin-ruby (0.3.2)
-    gitaly-proto (0.97.0)
+    gitaly-proto (0.99.0)
       google-protobuf (~> 3.1)
       grpc (~> 1.10)
     github-linguist (5.3.3)
@@ -335,9 +333,8 @@ GEM
       activesupport (>= 4.2.0)
     gollum-grit_adapter (1.0.1)
       gitlab-grit (~> 2.7, >= 2.7.1)
-    gon (6.1.0)
+    gon (6.2.0)
       actionpack (>= 3.0)
-      json
       multi_json
       request_store (>= 1.0)
     google-api-client (0.19.8)
@@ -367,8 +364,8 @@ GEM
       rack (>= 1.3.0)
       rack-accept
       virtus (>= 1.0.0)
-    grape-entity (0.6.1)
-      activesupport (>= 5.0.0)
+    grape-entity (0.7.1)
+      activesupport (>= 4.0)
       multi_json (>= 1.3.2)
     grape-route-helpers (2.1.0)
       activesupport
@@ -420,7 +417,7 @@ GEM
       json (~> 1.8)
       multi_xml (>= 0.5.2)
     httpclient (2.8.3)
-    i18n (0.9.5)
+    i18n (1.0.1)
       concurrent-ruby (~> 1.0)
     ice_nine (0.11.2)
     influxdb (0.5.3)
@@ -515,7 +512,7 @@ GEM
     net-ldap (0.16.1)
     net-ssh (4.2.0)
     netrc (0.11.0)
-    nio4r (2.2.0)
+    nio4r (2.3.1)
     nokogiri (1.8.2)
       mini_portile2 (~> 2.3.0)
     numerizer (0.1.1)
@@ -545,9 +542,9 @@ GEM
       omniauth (~> 1.2)
     omniauth-facebook (4.0.0)
       omniauth-oauth2 (~> 1.2)
-    omniauth-github (1.1.2)
-      omniauth (~> 1.0)
-      omniauth-oauth2 (~> 1.1)
+    omniauth-github (1.3.0)
+      omniauth (~> 1.5)
+      omniauth-oauth2 (>= 1.4.0, < 2.0)
     omniauth-gitlab (1.0.3)
       omniauth (~> 1.0)
       omniauth-oauth2 (~> 1.0)
@@ -633,7 +630,7 @@ GEM
       parser
       unparser
     procto (0.0.3)
-    prometheus-client-mmap (0.9.1)
+    prometheus-client-mmap (0.9.2)
     pry (0.11.3)
       coderay (~> 1.1.0)
       method_source (~> 0.9.0)
@@ -644,7 +641,7 @@ GEM
       pry (>= 0.10.4)
     public_suffix (3.0.2)
     pyu-ruby-sasl (0.0.3.3)
-    rack (2.0.4)
+    rack (2.0.5)
     rack-accept (0.4.5)
       rack (>= 0.4)
     rack-attack (4.4.1)
@@ -662,17 +659,17 @@ GEM
       rack
     rack-test (0.6.3)
       rack (>= 1.0)
-    rails (5.0.6)
-      actioncable (= 5.0.6)
-      actionmailer (= 5.0.6)
-      actionpack (= 5.0.6)
-      actionview (= 5.0.6)
-      activejob (= 5.0.6)
-      activemodel (= 5.0.6)
-      activerecord (= 5.0.6)
-      activesupport (= 5.0.6)
+    rails (5.0.7)
+      actioncable (= 5.0.7)
+      actionmailer (= 5.0.7)
+      actionpack (= 5.0.7)
+      actionview (= 5.0.7)
+      activejob (= 5.0.7)
+      activemodel (= 5.0.7)
+      activerecord (= 5.0.7)
+      activesupport (= 5.0.7)
       bundler (>= 1.3.0)
-      railties (= 5.0.6)
+      railties (= 5.0.7)
       sprockets-rails (>= 2.0.0)
     rails-controller-testing (1.0.2)
       actionpack (~> 5.x, >= 5.0.1)
@@ -683,21 +680,21 @@ GEM
     rails-dom-testing (2.0.3)
       activesupport (>= 4.2.0)
       nokogiri (>= 1.6)
-    rails-html-sanitizer (1.0.3)
-      loofah (~> 2.0)
+    rails-html-sanitizer (1.0.4)
+      loofah (~> 2.2, >= 2.2.2)
     rails-i18n (5.1.1)
       i18n (>= 0.7, < 2)
       railties (>= 5.0, < 6)
-    railties (5.0.6)
-      actionpack (= 5.0.6)
-      activesupport (= 5.0.6)
+    railties (5.0.7)
+      actionpack (= 5.0.7)
+      activesupport (= 5.0.7)
       method_source
       rake (>= 0.8.7)
       thor (>= 0.18.1, < 2.0)
     rainbow (2.2.2)
       rake
     raindrops (0.19.0)
-    rake (12.3.0)
+    rake (12.3.1)
     rb-fsevent (0.10.3)
     rb-inotify (0.9.10)
       ffi (>= 0.5.0, < 2)
@@ -1001,7 +998,7 @@ DEPENDENCIES
   asana (~> 0.6.0)
   asciidoctor (~> 1.5.6)
   asciidoctor-plantuml (= 0.0.8)
-  asset_sync (~> 2.2.0)
+  asset_sync (~> 2.4)
   attr_encrypted (~> 3.1.0)
   awesome_print (~> 1.2.0)
   babosa (~> 1.0.2)
@@ -1027,12 +1024,11 @@ DEPENDENCIES
   concurrent-ruby (~> 1.0.5)
   connection_pool (~> 2.0)
   creole (~> 0.5.0)
-  d3_rails (~> 3.5.0)
   database_cleaner (~> 1.5.0)
   deckar01-task_list (= 2.0.0)
   default_value_for (~> 3.0.5)
   device_detector
-  devise (~> 4.2)
+  devise (~> 4.4)
   devise-two-factor (~> 3.0.0)
   diffy (~> 3.1.0)
   doorkeeper (~> 4.3)
@@ -1063,7 +1059,7 @@ DEPENDENCIES
   gettext (~> 3.2.2)
   gettext_i18n_rails (~> 1.8.0)
   gettext_i18n_rails_js (~> 1.3)
-  gitaly-proto (~> 0.97.0)
+  gitaly-proto (~> 0.99.0)
   github-linguist (~> 5.3.3)
   gitlab-flowdock-git-hook (~> 1.0.1)
   gitlab-gollum-lib (~> 4.2)
@@ -1071,12 +1067,12 @@ DEPENDENCIES
   gitlab-markup (~> 1.6.2)
   gitlab-styles (~> 2.3)
   gitlab_omniauth-ldap (~> 2.0.4)
-  gon (~> 6.1.0)
+  gon (~> 6.2)
   google-api-client (~> 0.19.8)
   google-protobuf (= 3.5.1)
   gpgme
   grape (~> 1.0)
-  grape-entity (~> 0.6.0)
+  grape-entity (~> 0.7.1)
   grape-route-helpers (~> 2.1.0)
   grape_logging (~> 1.7)
   grpc (~> 1.11.0)
@@ -1117,7 +1113,7 @@ DEPENDENCIES
   omniauth-azure-oauth2 (~> 0.0.9)
   omniauth-cas3 (~> 1.1.4)
   omniauth-facebook (~> 4.0.0)
-  omniauth-github (~> 1.1.1)
+  omniauth-github (~> 1.3)
   omniauth-gitlab (~> 1.0.2)
   omniauth-google-oauth2 (~> 0.5.3)
   omniauth-kerberos (~> 0.3.0)
@@ -1136,14 +1132,14 @@ DEPENDENCIES
   peek-sidekiq (~> 1.0.3)
   pg (~> 0.18.2)
   premailer-rails (~> 1.9.7)
-  prometheus-client-mmap (~> 0.9.1)
+  prometheus-client-mmap (~> 0.9.2)
   pry-byebug (~> 3.4.1)
   pry-rails (~> 0.3.4)
   rack-attack (~> 4.4.1)
   rack-cors (~> 1.0.0)
   rack-oauth2 (~> 1.2.1)
   rack-proxy (~> 0.6.0)
-  rails (= 5.0.6)
+  rails (= 5.0.7)
   rails-controller-testing
   rails-deprecated_sanitizer (~> 1.0.3)
   rails-i18n (~> 5.1)