Merge remote-tracking branch 'upstream/master' into ce-to-ee-2018-10-30

# Conflicts:
#	app/assets/stylesheets/pages/builds.scss
#	app/views/layouts/header/_default.html.haml
#	lib/gitlab/background_migration/redact_links.rb
#	spec/models/ci/build_spec.rb

[ci skip]

.gitlab-ci.yml

@@ -372,7 +372,7 @@ package-and-qa:
     SCRIPT_NAME: trigger-build-docs
   environment:
     name: review-docs/$CI_COMMIT_REF_SLUG
-    # DOCS_REVIEW_APPS_DOMAIN and DOCS_GITLAB_REPO_SUFFIX are secret variables
+    # DOCS_REVIEW_APPS_DOMAIN and DOCS_GITLAB_REPO_SUFFIX are CI variables
     # Discussion: https://gitlab.com/gitlab-org/gitlab-ce/merge_requests/14236/diffs#note_40140693
     url: http://$CI_ENVIRONMENT_SLUG.$DOCS_REVIEW_APPS_DOMAIN/$DOCS_GITLAB_REPO_SUFFIX
     on_stop: review-docs-cleanup

app/assets/javascripts/ci_variable_list/ajax_variable_list.js

@@ -47,7 +47,7 @@ export default class AjaxVariableList {
   }
 
   onSaveClicked() {
-    const loadingIcon = this.saveButton.querySelector('.js-secret-variables-save-loading-icon');
+    const loadingIcon = this.saveButton.querySelector('.js-ci-variables-save-loading-icon');
     loadingIcon.classList.toggle('hide', false);
     this.errorBox.classList.toggle('hide', true);
     // We use this to prevent a user from changing a key before we have a chance

app/assets/javascripts/diffs/components/app.vue

@@ -153,13 +153,9 @@ export default {
     },
     setDiscussions() {
       if (this.isNotesFetched && !this.assignedDiscussions && !this.isLoading) {
-        requestIdleCallback(
-          () =>
-            this.assignDiscussionsToDiff().then(() => {
-              this.assignedDiscussions = true;
-            }),
-          { timeout: 1000 },
-        );
+        this.assignedDiscussions = true;
+
+        requestIdleCallback(() => this.assignDiscussionsToDiff(), { timeout: 1000 });
       }
     },
     adjustView() {

app/assets/javascripts/diffs/store/mutations.js

@@ -133,7 +133,7 @@ export default {
                 },
                 right: {
                   ...line.right,
-                  discussions: right ? line.right.discussions.concat(discussion) : [],
+                  discussions: right && !left ? line.right.discussions.concat(discussion) : [],
                 },
               };
             }

app/assets/javascripts/notes/components/discussion_filter.vue

@@ -22,9 +22,7 @@ export default {
     return { currentValue: this.defaultValue };
   },
   computed: {
-    ...mapGetters([
-      'getNotesDataByProp',
-    ]),
+    ...mapGetters(['getNotesDataByProp']),
     currentFilter() {
       if (!this.currentValue) return this.filters[0];
       return this.filters.find(filter => filter.value === this.currentValue);
@@ -51,7 +49,7 @@ export default {
     <button
       id="discussion-filter-dropdown"
       ref="dropdownToggle"
-      class="btn btn-default"
+      class="btn btn-default qa-discussion-filter"
       data-toggle="dropdown"
       aria-expanded="false"
     >
@@ -69,6 +67,7 @@ export default {
           >
             <button
               :class="{ 'is-active': filter.value === currentValue }"
+              class="qa-filter-options"
               type="button"
               @click="selectFilter(filter.value)"
             >

app/assets/javascripts/pages/groups/settings/ci_cd/show/index.js

@@ -9,7 +9,7 @@ document.addEventListener('DOMContentLoaded', () => {
   // eslint-disable-next-line no-new
   new AjaxVariableList({
     container: variableListEl,
-    saveButton: variableListEl.querySelector('.js-secret-variables-save-button'),
+    saveButton: variableListEl.querySelector('.js-ci-variables-save-button'),
     errorBox: variableListEl.querySelector('.js-ci-variable-error-box'),
     saveEndpoint: variableListEl.dataset.saveEndpoint,
   });

app/assets/javascripts/pages/projects/settings/ci_cd/show/index.js

@@ -18,7 +18,7 @@ document.addEventListener('DOMContentLoaded', () => {
   // eslint-disable-next-line no-new
   new AjaxVariableList({
     container: variableListEl,
-    saveButton: variableListEl.querySelector('.js-secret-variables-save-button'),
+    saveButton: variableListEl.querySelector('.js-ci-variables-save-button'),
     errorBox: variableListEl.querySelector('.js-ci-variable-error-box'),
     saveEndpoint: variableListEl.dataset.saveEndpoint,
   });

app/assets/javascripts/pipelines/components/pipelines_actions.vue

 <script>
 import { s__, sprintf } from '~/locale';
-import { formatTime } from '~/lib/utils/datetime_utility';
 import eventHub from '../event_hub';
 import icon from '../../vue_shared/components/icon.vue';
 import tooltip from '../../vue_shared/directives/tooltip';
+import GlCountdown from '~/vue_shared/components/gl_countdown.vue';
 
 export default {
   directives: {
@@ -11,6 +11,7 @@ export default {
   },
   components: {
     icon,
+    GlCountdown,
   },
   props: {
     actions: {
@@ -51,11 +52,6 @@ export default {
 
       return !action.playable;
     },
-
-    remainingTime(action) {
-      const remainingMilliseconds = new Date(action.scheduled_at).getTime() - Date.now();
-      return formatTime(Math.max(0, remainingMilliseconds));
-    },
   },
 };
 </script>
@@ -100,7 +96,7 @@ export default {
             class="pull-right"
           >
             <icon name="clock" />
-            {{ remainingTime(action) }}
+            <gl-countdown :end-date-string="action.scheduled_at" />
           </span>
         </button>
       </li>

app/assets/javascripts/vue_merge_request_widget/components/deployment.vue

@@ -10,6 +10,7 @@ import { visitUrl } from '../../lib/utils/url_utility';
 import createFlash from '../../flash';
 import MemoryUsage from './memory_usage.vue';
 import StatusIcon from './mr_widget_status_icon.vue';
+import ReviewAppLink from './review_app_link.vue';
 import MRWidgetService from '../services/mr_widget_service';
 
 export default {
@@ -21,6 +22,7 @@ export default {
     Icon,
     TooltipOnTruncate,
     FilteredSearchDropdown,
+    ReviewAppLink,
   },
   directives: {
     tooltip,
@@ -63,6 +65,12 @@ export default {
     deployedText() {
       return this.$options.deployedTextMap[this.deployment.status];
     },
+    shouldRenderDropdown() {
+      return (
+        this.enableCiEnvironmentsStatusChanges &&
+        (this.deployment.changes && this.deployment.changes.length > 0)
+      );
+    },
   },
   methods: {
     stopEnvironment() {
@@ -133,7 +141,7 @@ export default {
           <div>
             <template v-if="hasExternalUrls">
               <filtered-search-dropdown
-                v-if="enableCiEnvironmentsStatusChanges"
+                v-if="shouldRenderDropdown"
                 class="js-mr-wigdet-deployment-dropdown inline"
                 :items="deployment.changes"
                 :main-action-link="deployment.external_url"
@@ -143,18 +151,10 @@ export default {
                   slot="mainAction"
                   slot-scope="slotProps"
                 >
-                  <a
-                    :href="deployment.external_url"
-                    target="_blank"
-                    rel="noopener noreferrer nofollow"
-                    class="deploy-link js-deploy-url inline"
-                    :class="slotProps.className"
-                  >
-                    <span>
-                      {{ __('View app') }}
-                      <icon name="external-link" />
-                    </span>
-                  </a>
+                  <review-app-link
+                    :link="deployment.external_url"
+                    :css-class="`deploy-link js-deploy-url inline ${slotProps.className}`"
+                  />
                 </template>
 
                 <template
@@ -177,18 +177,11 @@ export default {
                   </a>
                 </template>
               </filtered-search-dropdown>
-              <a
+              <review-app-link
                 v-else
-                :href="deployment.external_url"
-                target="_blank"
-                rel="noopener noreferrer nofollow"
-                class="js-deploy-url js-deploy-url-feature-flag deploy-link btn btn-default btn-sm inline"
-              >
-                <span>
-                  {{ __('View app') }}
-                  <icon name="external-link" />
-                </span>
-              </a>
+                :link="deployment.external_url"
+                css-class="js-deploy-url js-deploy-url-feature-flag deploy-link btn btn-default btn-sm inlin"
+              />
             </template>
             <loading-button
               v-if="deployment.stop_url"

app/assets/javascripts/vue_merge_request_widget/components/review_app_link.vue

+<script>
+import Icon from '~/vue_shared/components/icon.vue';
+
+export default {
+  components: {
+    Icon,
+  },
+  props: {
+    link: {
+      type: String,
+      required: true,
+    },
+    cssClass: {
+      type: String,
+      required: true,
+    },
+  },
+};
+</script>
+<template>
+  <a
+    :href="link"
+    target="_blank"
+    rel="noopener noreferrer nofollow"
+    :class="cssClass"
+  >
+    {{ __('View app') }}
+    <icon name="external-link" />
+  </a>
+</template>

app/assets/stylesheets/pages/builds.scss

@@ -50,12 +50,35 @@
     position: relative;
   }
 
+<<<<<<< HEAD
+=======
+
+>>>>>>> upstream/master
   .build-trace {
     @include build-trace();
   }
 
   .top-bar {
     @include build-trace-top-bar(35px);
+<<<<<<< HEAD
+=======
+
+    &.affix {
+      top: $header-height;
+
+      // with sidebar
+      &.sidebar-expanded {
+        right: 306px;
+        left: 16px;
+      }
+
+      // without sidebar
+      &.sidebar-collapsed {
+        right: 16px;
+        left: 16px;
+      }
+    }
+>>>>>>> upstream/master
 
     &.sidebar-expanded {
       margin-right: calc(#{$gutter-width} - 16px);
@@ -74,49 +97,7 @@
     }
 
     .controllers {
-      display: flex;
-      justify-content: center;
-      align-items: center;
-
-      svg {
-        height: 15px;
-        display: block;
-        fill: $gl-text-color;
-      }
-
-      .controllers-buttons {
-        color: $gl-text-color;
-        margin: 0 $grid-size;
-
-        &:last-child {
-          margin-right: 0;
-        }
-      }
-
-      .btn-scroll.animate {
-        .first-triangle {
-          animation: blinking-scroll-button 1s ease infinite;
-          animation-delay: 0.3s;
-        }
-
-        .second-triangle {
-          animation: blinking-scroll-button 1s ease infinite;
-          animation-delay: 0.2s;
-        }
-
-        .third-triangle {
-          animation: blinking-scroll-button 1s ease infinite;
-        }
-
-        &:disabled {
-          opacity: 1;
-        }
-      }
-
-      .btn-scroll:disabled {
-        opacity: 0.35;
-        cursor: not-allowed;
-      }
+      @include build-controllers(15px, center, false, 0);
     }
   }
 
@@ -140,6 +121,15 @@
   }
 }
 
+<<<<<<< HEAD
+=======
+.with-performance-bar .build-page {
+  .top-bar.affix {
+    top: $header-height + $performance-bar-height;
+  }
+}
+
+>>>>>>> upstream/master
 .build-header {
   .ci-header-container,
   .header-action-buttons {

app/controllers/application_controller.rb

@@ -46,6 +46,8 @@ class ApplicationController < ActionController::Base
     :git_import_enabled?, :gitlab_project_import_enabled?,
     :manifest_import_enabled?
 
+  DEFAULT_GITLAB_CACHE_CONTROL = "#{ActionDispatch::Http::Cache::Response::DEFAULT_CACHE_CONTROL}, no-store".freeze
+
   rescue_from Encoding::CompatibilityError do |exception|
     log_exception(exception)
     render "errors/encoding", layout: "errors", status: 500
@@ -252,6 +254,13 @@ class ApplicationController < ActionController::Base
     headers['X-XSS-Protection'] = '1; mode=block'
     headers['X-UA-Compatible'] = 'IE=edge'
     headers['X-Content-Type-Options'] = 'nosniff'
+
+    if current_user
+      # Adds `no-store` to the DEFAULT_CACHE_CONTROL, to prevent security
+      # concerns due to caching private data.
+      headers['Cache-Control'] = DEFAULT_GITLAB_CACHE_CONTROL
+      headers["Pragma"] = "no-cache" # HTTP 1.0 compatibility
+    end
   end
 
   def validate_user_service_ticket!

app/controllers/groups/settings/ci_cd_controller.rb

@@ -7,7 +7,7 @@ module Groups
       before_action :authorize_admin_pipeline!
 
       def show
-        define_secret_variables
+        define_ci_variables
       end
 
       def reset_registration_token
@@ -19,7 +19,7 @@ module Groups
 
       private
 
-      def define_secret_variables
+      def define_ci_variables
         @variable = Ci::GroupVariable.new(group: group)
           .present(current_user: current_user)
         @variables = group.variables.order_key_asc

app/controllers/projects/settings/ci_cd_controller.rb

@@ -70,7 +70,7 @@ module Projects
 
       def define_variables
         define_runners_variables
-        define_secret_variables
+        define_ci_variables
         define_triggers_variables
         define_badges_variables
         define_auto_devops_variables
@@ -92,7 +92,7 @@ module Projects
         @group_runners = ::Ci::Runner.belonging_to_parent_group_of_project(@project.id)
       end
 
-      def define_secret_variables
+      def define_ci_variables
         @variable = ::Ci::Variable.new(project: project)
           .present(current_user: current_user)
         @variables = project.variables.order_key_asc

app/finders/personal_access_tokens_finder.rb

@@ -3,7 +3,7 @@
 class PersonalAccessTokensFinder
   attr_accessor :params
 
-  delegate :build, :find, :find_by, to: :execute
+  delegate :build, :find, :find_by, :find_by_token, to: :execute
 
   def initialize(params = {})
     @params = params

app/models/ci/build.rb

@@ -597,11 +597,11 @@ module Ci
     def secret_group_variables
       return [] unless project.group
 
-      project.group.secret_variables_for(ref, project)
+      project.group.ci_variables_for(ref, project)
     end
 
     def secret_project_variables(environment: persisted_environment)
-      project.secret_variables_for(ref: ref, environment: environment)
+      project.ci_variables_for(ref: ref, environment: environment)
     end
 
     def steps

app/models/concerns/token_authenticatable.rb

@@ -5,57 +5,50 @@ module TokenAuthenticatable
 
   private
 
-  def write_new_token(token_field)
-    new_token = generate_available_token(token_field)
-    write_attribute(token_field, new_token)
-  end
-
-  def generate_available_token(token_field)
-    loop do
-      token = generate_token(token_field)
-      break token unless self.class.unscoped.find_by(token_field => token)
-    end
-  end
-
-  def generate_token(token_field)
-    Devise.friendly_token
-  end
-
   class_methods do
-    def authentication_token_fields
-      @token_fields || []
-    end
-
     private # rubocop:disable Lint/UselessAccessModifier
 
-    def add_authentication_token_field(token_field)
+    def add_authentication_token_field(token_field, options = {})
       @token_fields = [] unless @token_fields
+
+      if @token_fields.include?(token_field)
+        raise ArgumentError.new("#{token_field} already configured via add_authentication_token_field")
+      end
+
       @token_fields << token_field
 
+      attr_accessor :cleartext_tokens
+
+      strategy = if options[:digest]
+                   TokenAuthenticatableStrategies::Digest.new(self, token_field, options)
+                 else
+                   TokenAuthenticatableStrategies::Insecure.new(self, token_field, options)
+                 end
+
       define_singleton_method("find_by_#{token_field}") do |token|
-        find_by(token_field => token) if token
+        strategy.find_token_authenticatable(token)
       end
 
-      define_method("ensure_#{token_field}") do
-        current_token = read_attribute(token_field)
-        current_token.blank? ? write_new_token(token_field) : current_token
+      define_method(token_field) do
+        strategy.get_token(self)
       end
 
       define_method("set_#{token_field}") do |token|
-        write_attribute(token_field, token) if token
+        strategy.set_token(self, token)
+      end
+
+      define_method("ensure_#{token_field}") do
+        strategy.ensure_token(self)
       end
 
       # Returns a token, but only saves when the database is in read & write mode
       define_method("ensure_#{token_field}!") do
-        send("reset_#{token_field}!") if read_attribute(token_field).blank? # rubocop:disable GitlabSecurity/PublicSend
-
-        read_attribute(token_field)
+        strategy.ensure_token!(self)
       end
 
       # Resets the token, but only saves when the database is in read & write mode
       define_method("reset_#{token_field}!") do
-        write_new_token(token_field)
-        save! if Gitlab::Database.read_write?
+        strategy.reset_token!(self)
       end
     end
   end

app/models/concerns/token_authenticatable_strategies/base.rb

+# frozen_string_literal: true
+
+module TokenAuthenticatableStrategies
+  class Base
+    def initialize(klass, token_field, options)
+      @klass = klass
+      @token_field = token_field
+      @options = options
+    end
+
+    def find_token_authenticatable(instance, unscoped = false)
+      raise NotImplementedError
+    end
+
+    def get_token(instance)
+      raise NotImplementedError
+    end
+
+    def set_token(instance)
+      raise NotImplementedError
+    end
+
+    def ensure_token(instance)
+      write_new_token(instance) unless token_set?(instance)
+    end
+
+    # Returns a token, but only saves when the database is in read & write mode
+    def ensure_token!(instance)
+      reset_token!(instance) unless token_set?(instance)
+      get_token(instance)
+    end
+
+    # Resets the token, but only saves when the database is in read & write mode
+    def reset_token!(instance)
+      write_new_token(instance)
+      instance.save! if Gitlab::Database.read_write?
+    end
+
+    protected
+
+    def write_new_token(instance)
+      new_token = generate_available_token
+      set_token(instance, new_token)
+    end
+
+    def generate_available_token
+      loop do
+        token = generate_token
+        break token unless find_token_authenticatable(token, true)
+      end
+    end
+
+    def generate_token
+      @options[:token_generator] ? @options[:token_generator].call : Devise.friendly_token
+    end
+
+    def relation(unscoped)
+      unscoped ? @klass.unscoped : @klass
+    end
+
+    def token_set?(instance)
+      raise NotImplementedError
+    end
+
+    def token_field_name
+      @token_field
+    end
+  end
+end

app/models/concerns/token_authenticatable_strategies/digest.rb

+# frozen_string_literal: true
+
+module TokenAuthenticatableStrategies
+  class Digest < Base
+    def find_token_authenticatable(token, unscoped = false)
+      return unless token
+
+      token_authenticatable = relation(unscoped).find_by(token_field_name => Gitlab::CryptoHelper.sha256(token))
+
+      if @options[:fallback]
+        token_authenticatable ||= fallback_strategy.find_token_authenticatable(token)
+      end
+
+      token_authenticatable
+    end
+
+    def get_token(instance)
+      token = instance.cleartext_tokens&.[](@token_field)
+      token ||= fallback_strategy.get_token(instance) if @options[:fallback]
+
+      token
+    end
+
+    def set_token(instance, token)
+      return unless token
+
+      instance.cleartext_tokens ||= {}
+      instance.cleartext_tokens[@token_field] = token
+      instance[token_field_name] = Gitlab::CryptoHelper.sha256(token)
+      instance[@token_field] = nil if @options[:fallback]
+    end
+
+    protected
+
+    def fallback_strategy
+      @fallback_strategy ||= TokenAuthenticatableStrategies::Insecure.new(@klass, @token_field, @options)
+    end
+
+    def token_set?(instance)
+      token_digest = instance.read_attribute(token_field_name)
+      token_digest ||= instance.read_attribute(@token_field) if @options[:fallback]
+
+      token_digest.present?
+    end
+
+    def token_field_name
+      "#{@token_field}_digest"
+    end
+  end
+end

app/models/concerns/token_authenticatable_strategies/insecure.rb

+# frozen_string_literal: true
+
+module TokenAuthenticatableStrategies
+  class Insecure < Base
+    def find_token_authenticatable(token, unscoped = false)
+      relation(unscoped).find_by(@token_field => token) if token
+    end
+
+    def get_token(instance)
+      instance.read_attribute(@token_field)
+    end
+
+    def set_token(instance, token)
+      instance[@token_field] = token if token
+    end
+
+    protected
+
+    def token_set?(instance)
+      instance.read_attribute(@token_field).present?
+    end
+  end
+end

app/models/group.rb

@@ -371,7 +371,7 @@ class Group < Namespace
     }
   end
 
-  def secret_variables_for(ref, project)
+  def ci_variables_for(ref, project)
     list_of_ids = [self] + ancestors
     variables = Ci::GroupVariable.where(group: list_of_ids)
     variables = variables.unprotected unless project.protected_for?(ref)

app/models/lfs_object.rb

@@ -8,7 +8,7 @@ class LfsObject < ActiveRecord::Base
   has_many :lfs_objects_projects, dependent: :destroy # rubocop:disable Cop/ActiveRecordDependent
   has_many :projects, through: :lfs_objects_projects
 
-  scope :with_files_stored_locally, -> { where(file_store: [nil, LfsObjectUploader::Store::LOCAL]) }
+  scope :with_files_stored_locally, -> { where(file_store: LfsObjectUploader::Store::LOCAL) }
 
   validates :oid, presence: true, uniqueness: true
 
@@ -27,7 +27,7 @@ class LfsObject < ActiveRecord::Base
   end
 
   def local_store?
-    [nil, LfsObjectUploader::Store::LOCAL].include?(self.file_store)
+    file_store == LfsObjectUploader::Store::LOCAL
   end
 
   # rubocop: disable DestroyAll

app/models/personal_access_token.rb

@@ -3,7 +3,7 @@
 class PersonalAccessToken < ActiveRecord::Base
   include Expirable
   include TokenAuthenticatable
-  add_authentication_token_field :token
+  add_authentication_token_field :token, digest: true, fallback: true
 
   REDIS_EXPIRY_TIME = 3.minutes
 
@@ -33,16 +33,22 @@ class PersonalAccessToken < ActiveRecord::Base
 
   def self.redis_getdel(user_id)
     Gitlab::Redis::SharedState.with do |redis|
-      token = redis.get(redis_shared_state_key(user_id))
+      encrypted_token = redis.get(redis_shared_state_key(user_id))
       redis.del(redis_shared_state_key(user_id))
-      token
+      begin
+        Gitlab::CryptoHelper.aes256_gcm_decrypt(encrypted_token)
+      rescue => ex
+        logger.warn "Failed to decrypt PersonalAccessToken value stored in Redis for User ##{user_id}: #{ex.class}"
+        encrypted_token
+      end
     end
   end
 
   def self.redis_store!(user_id, token)
+    encrypted_token = Gitlab::CryptoHelper.aes256_gcm_encrypt(token)
+
     Gitlab::Redis::SharedState.with do |redis|
-      redis.set(redis_shared_state_key(user_id), token, ex: REDIS_EXPIRY_TIME)
-      token
+      redis.set(redis_shared_state_key(user_id), encrypted_token, ex: REDIS_EXPIRY_TIME)
     end
   end
 

app/models/project.rb

@@ -1814,7 +1814,7 @@ class Project < ActiveRecord::Base
       .first
   end
 
-  def secret_variables_for(ref:, environment: nil)
+  def ci_variables_for(ref:, environment: nil)
     # EE would use the environment
     if protected_for?(ref)
       variables

app/models/user.rb

@@ -30,7 +30,7 @@ class User < ActiveRecord::Base
   ignore_column :email_provider
   ignore_column :authentication_token
 
-  add_authentication_token_field :incoming_email_token
+  add_authentication_token_field :incoming_email_token, token_generator: -> { SecureRandom.hex.to_i(16).to_s(36) }
   add_authentication_token_field :feed_token
 
   default_value_for :admin, false
@@ -476,7 +476,7 @@ class User < ActiveRecord::Base
     def find_by_personal_access_token(token_string)
       return unless token_string
 
-      PersonalAccessTokensFinder.new(state: 'active').find_by(token: token_string)&.user # rubocop: disable CodeReuse/Finder
+      PersonalAccessTokensFinder.new(state: 'active').find_by_token(token_string)&.user # rubocop: disable CodeReuse/Finder
     end
 
     # Returns a user for the given SSH key.
@@ -1486,15 +1486,6 @@ class User < ActiveRecord::Base
     end
   end
 
-  def generate_token(token_field)
-    if token_field == :incoming_email_token
-      # Needs to be all lowercase and alphanumeric because it's gonna be used in an email address.
-      SecureRandom.hex.to_i(16).to_s(36)
-    else
-      super
-    end
-  end
-
   def self.unique_internal(scope, username, email_pattern, &block)
     scope.first || create_unique_internal(scope, username, email_pattern, &block)
   end

app/presenters/merge_request_presenter.rb

@@ -110,16 +110,10 @@ class MergeRequestPresenter < Gitlab::View::Presenter::Delegated
     namespace = source_project_namespace
     branch = source_branch
 
-    if source_branch_exists?
-      namespace = link_to(namespace, project_path(source_project))
-      branch = link_to(branch, project_tree_path(source_project, source_branch))
-    end
+    namespace_link = source_branch_exists? ? link_to(namespace, project_path(source_project)) : ERB::Util.html_escape(namespace)
+    branch_link = source_branch_exists? ? link_to(branch, project_tree_path(source_project, source_branch)) : ERB::Util.html_escape(branch)
 
-    if for_fork?
-      namespace + ":" + branch
-    else
-      branch
-    end
+    for_fork? ? "#{namespace_link}:#{branch_link}" : branch_link
   end
 
   def closing_issues_links

app/services/merge_requests/refresh_service.rb

@@ -87,7 +87,7 @@ module MergeRequests
         .where.not(target_project: @project).to_a
 
       filter_merge_requests(merge_requests).each do |merge_request|
-        if merge_request.source_branch == @push.branch_name || @push.force_push?
+        if branch_and_project_match?(merge_request) || @push.force_push?
           merge_request.reload_diff(current_user)
         else
           mr_commit_ids = merge_request.commit_shas
@@ -106,6 +106,11 @@ module MergeRequests
     end
     # rubocop: enable CodeReuse/ActiveRecord
 
+    def branch_and_project_match?(merge_request)
+      merge_request.source_project == @project &&
+        merge_request.source_branch == @push.branch_name
+    end
+
     def reset_merge_when_pipeline_succeeds
       merge_requests_for_source_branch.each(&:reset_merge_when_pipeline_succeeds)
     end

app/views/ci/variables/_index.html.haml

@@ -9,8 +9,8 @@
         = render 'ci/variables/variable_row', form_field: 'variables', variable: variable
       = render 'ci/variables/variable_row', form_field: 'variables'
     .prepend-top-20
-      %button.btn.btn-success.js-secret-variables-save-button{ type: 'button' }
-        %span.hide.js-secret-variables-save-loading-icon
+      %button.btn.btn-success.js-ci-variables-save-button{ type: 'button' }
+        %span.hide.js-ci-variables-save-loading-icon
           = icon('spinner spin')
         = _('Save variables')
       %button.btn.btn-info.btn-inverted.prepend-left-10.js-secret-value-reveal-button{ type: 'button', data: { secret_reveal_status: "#{@variables.size == 0}" } }

app/views/groups/settings/ci_cd/show.html.haml

@@ -3,7 +3,7 @@
 
 - expanded = Rails.env.test?
 
-%section.settings#secret-variables.no-animate{ class: ('expanded' if expanded) }
+%section.settings#ci-variables.no-animate{ class: ('expanded' if expanded) }
   .settings-header
     %h4
       = _('Variables')

app/views/layouts/header/_default.html.haml

@@ -5,7 +5,11 @@
 - else
   - search_path_url = search_path
 
+<<<<<<< HEAD
 %header.navbar.navbar-gitlab.qa-navbar.navbar-expand-sm.navbar-gitlab-new.js-navbar
+=======
+%header.navbar.navbar-gitlab.qa-navbar.navbar-expand-sm.js-navbar
+>>>>>>> upstream/master
   %a.sr-only.gl-accessibility{ href: "#content-body", tabindex: "1" } Skip to content
   .container-fluid
     .header-content

changelogs/unreleased/51527-xss-in-mr-source-branch.yml

+---
+title: Fix XSS in merge request source branch name
+merge_request:
+author:
+type: security

changelogs/unreleased/53227-empty-list.yml

+---
+title: Only renders dropdown for review app changes when we have a list of files to
+  show. Otherwise will render the regular review app button
+merge_request:
+author:
+type: other

changelogs/unreleased/fix-53298.yml

+---
+title: 'Fix #53298: JupyterHub restarts should work without errors'
+merge_request: 22671
+author: Amit Rathi
+type: fixed

changelogs/unreleased/ravlen-rename-secret-variables-in-codebase.yml

+---
+title: "Secret Variables renamed to CI Variables in the codebase, to match UX"
+merge_request: 22414
+author: Marcel Amirault @ravlen
+type: changed
\ No newline at end of file

changelogs/unreleased/security-2717-fix-issue-title-xss.yml

+---
+title: Escape entity title while autocomplete template rendering to prevent XSS
+merge_request: 2556
+author:
+type: security

changelogs/unreleased/security-51113-hash_personal_access_tokens.yml

+---
+title: Persist only SHA digest of PersonalAccessToken#token
+merge_request:
+author:
+type: security

changelogs/unreleased/sh-fix-issue-53153.yml

+---
+title: Fix extra merge request versions created from forked merge requests
+merge_request: 22611
+author:
+type: fixed

changelogs/unreleased/sh-fix-wiki-security-issue-53072.yml

+---
+title: Validate Wiki attachments are valid temporary files
+merge_request:
+author:
+type: security

changelogs/unreleased/tc-index-lfs-objects-file-store.yml

+---
+title: Enhance performance of counting local LFS objects
+merge_request: 22143
+author:
+type: performance

changelogs/unreleased/winh-pipeline-actions-dynamic-timer.yml

+---
+title: Add dynamic timer for delayed jobs in pipelines list
+merge_request: 22621
+author:
+type: changed

db/migrate/20180910153412_add_token_digest_to_personal_access_tokens.rb

+# frozen_string_literal: true
+
+class AddTokenDigestToPersonalAccessTokens < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  DOWNTIME = false
+
+  def up
+    change_column :personal_access_tokens, :token, :string, null: true
+
+    add_column :personal_access_tokens, :token_digest, :string
+  end
+
+  def down
+    remove_column :personal_access_tokens, :token_digest
+
+    change_column :personal_access_tokens, :token, :string, null: false
+  end
+end

db/migrate/20180910153413_add_index_to_token_digest_on_personal_access_tokens.rb

+# frozen_string_literal: true
+
+class AddIndexToTokenDigestOnPersonalAccessTokens < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  DOWNTIME = false
+
+  disable_ddl_transaction!
+
+  def up
+    add_concurrent_index :personal_access_tokens, :token_digest, unique: true
+  end
+
+  def down
+    remove_concurrent_index :personal_access_tokens, :token_digest if index_exists?(:personal_access_tokens, :token_digest)
+  end
+end

db/migrate/20181005110927_add_index_to_lfs_objects_file_store.rb

+# frozen_string_literal: true
+
+class AddIndexToLfsObjectsFileStore < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  DOWNTIME = false
+
+  disable_ddl_transaction!
+
+  def up
+    add_concurrent_index :lfs_objects, :file_store
+  end
+
+  def down
+    remove_concurrent_index :lfs_objects, :file_store
+  end
+end

db/post_migrate/20180913142237_schedule_digest_personal_access_tokens.rb

+class ScheduleDigestPersonalAccessTokens < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  DOWNTIME = false
+
+  BATCH_SIZE = 10_000
+  MIGRATION = 'DigestColumn'
+  DELAY_INTERVAL = 5.minutes.to_i
+
+  disable_ddl_transaction!
+
+  class PersonalAccessToken < ActiveRecord::Base
+    include EachBatch
+
+    self.table_name = 'personal_access_tokens'
+  end
+
+  def up
+    PersonalAccessToken.where('token is NOT NULL').each_batch(of: BATCH_SIZE) do |batch, index|
+      range = batch.pluck('MIN(id)', 'MAX(id)').first
+      BackgroundMigrationWorker.perform_in(index * DELAY_INTERVAL, MIGRATION, ['PersonalAccessToken', :token, :token_digest, *range])
+    end
+  end
+
+  def down
+    # raise ActiveRecord::IrreversibleMigration
+  end
+end

db/schema.rb

@@ -1619,6 +1619,7 @@ ActiveRecord::Schema.define(version: 20181017131623) do
     t.integer "file_store"
   end
 
+  add_index "lfs_objects", ["file_store"], name: "index_lfs_objects_on_file_store", using: :btree
   add_index "lfs_objects", ["oid"], name: "index_lfs_objects_on_oid", unique: true, using: :btree
 
   create_table "lfs_objects_projects", force: :cascade do |t|
@@ -2104,7 +2105,7 @@ ActiveRecord::Schema.define(version: 20181017131623) do
 
   create_table "personal_access_tokens", force: :cascade do |t|
     t.integer "user_id", null: false
-    t.string "token", null: false
+    t.string "token"
     t.string "name", null: false
     t.boolean "revoked", default: false
     t.date "expires_at"
@@ -2112,9 +2113,11 @@ ActiveRecord::Schema.define(version: 20181017131623) do
     t.datetime "updated_at", null: false
     t.string "scopes", default: "--- []\n", null: false
     t.boolean "impersonation", default: false, null: false
+    t.string "token_digest"
   end
 
   add_index "personal_access_tokens", ["token"], name: "index_personal_access_tokens_on_token", unique: true, using: :btree
+  add_index "personal_access_tokens", ["token_digest"], name: "index_personal_access_tokens_on_token_digest", unique: true, using: :btree
   add_index "personal_access_tokens", ["user_id"], name: "index_personal_access_tokens_on_user_id", using: :btree
 
   create_table "plans", force: :cascade do |t|

doc/development/testing_guide/review_apps.md

@@ -37,9 +37,9 @@ Review Apps are automatically deployed by each pipeline, both in
   review app manually, and is also started by GitLab once a branch is deleted
 - [TBD] Review apps are cleaned up regularly using a pipeline schedule that runs
   the [`scripts/review_apps/automated_cleanup.rb`][automated_cleanup.rb] script
-- If you're unable to log in using the `root` username and password the 
-  deployment may have failed. Stop the review app via the `stop_review` 
-  manual job and then retry the `review` job to redeploy the review app.
+- If you're unable to log in using the `root` username and password, the 
+  deployment may have failed. Stop the Review App via the `stop_review` 
+  manual job and then retry the `review` job to redeploy the Review App.
 
 [^1]: We use the `CNG-mirror` project so that the `CNG`, (**C**loud **N**ative **G**itLab), project's registry is
   not overloaded with a lot of transient Docker images.

lib/api/validations/types/safe_file.rb

+# frozen_string_literal: true
+
+# This module overrides the Grape type validator defined in
+# https://github.com/ruby-grape/grape/blob/master/lib/grape/validations/types/file.rb
+module API
+  module Validations
+    module Types
+      class SafeFile < ::Grape::Validations::Types::File
+        def value_coerced?(value)
+          super && value[:tempfile].is_a?(Tempfile)
+        end
+      end
+    end
+  end
+end

lib/api/wikis.rb

@@ -6,7 +6,7 @@ module API
       def commit_params(attrs)
         {
           file_name: attrs[:file][:filename],
-          file_content: File.read(attrs[:file][:tempfile]),
+          file_content: attrs[:file][:tempfile].read,
           branch_name: attrs[:branch]
         }
       end
@@ -100,7 +100,7 @@ module API
         success Entities::WikiAttachment
       end
       params do
-        requires :file, type: File, desc: 'The attachment file to be uploaded'
+        requires :file, type: ::API::Validations::Types::SafeFile, desc: 'The attachment file to be uploaded'
         optional :branch, type: String, desc: 'The name of the branch'
       end
       post ":id/wikis/attachments", requirements: API::PROJECT_ENDPOINT_REQUIREMENTS do

lib/gitlab/auth.rb

@@ -153,17 +153,15 @@ module Gitlab
       end
       # rubocop: enable CodeReuse/ActiveRecord
 
-      # rubocop: disable CodeReuse/ActiveRecord
       def personal_access_token_check(password)
         return unless password.present?
 
-        token = PersonalAccessTokensFinder.new(state: 'active').find_by(token: password)
+        token = PersonalAccessTokensFinder.new(state: 'active').find_by_token(password)
 
         if token && valid_scoped_token?(token, available_scopes)
           Gitlab::Auth::Result.new(token.user, nil, :personal_access_token, abilities_for_scopes(token.scopes))
         end
       end
-      # rubocop: enable CodeReuse/ActiveRecord
 
       def valid_oauth_token?(token)
         token && token.accessible? && valid_scoped_token?(token, [:api])

lib/gitlab/auth/user_auth_finders.rb

@@ -75,7 +75,6 @@ module Gitlab
         end
       end
 
-      # rubocop: disable CodeReuse/ActiveRecord
       def find_personal_access_token
         token =
           current_request.params[PRIVATE_TOKEN_PARAM].presence ||
@@ -84,9 +83,8 @@ module Gitlab
         return unless token
 
         # Expiration, revocation and scopes are verified in `validate_access_token!`
-        PersonalAccessToken.find_by(token: token) || raise(UnauthorizedError)
+        PersonalAccessToken.find_by_token(token) || raise(UnauthorizedError)
       end
-      # rubocop: enable CodeReuse/ActiveRecord
 
       def find_oauth_access_token
         token = Doorkeeper::OAuth::Token.from_request(current_request, *Doorkeeper.configuration.access_token_methods)

lib/gitlab/background_migration/digest_column.rb

+# frozen_string_literal: true
+
+# rubocop:disable Style/Documentation
+module Gitlab
+  module BackgroundMigration
+    class DigestColumn
+      class PersonalAccessToken < ActiveRecord::Base
+        self.table_name = 'personal_access_tokens'
+      end
+
+      def perform(model, attribute_from, attribute_to, start_id, stop_id)
+        model = model.constantize if model.is_a?(String)
+
+        model.transaction do
+          relation = model.where(id: start_id..stop_id).where.not(attribute_from => nil).lock
+
+          relation.each do |instance|
+            instance.update_columns(attribute_to => Gitlab::CryptoHelper.sha256(instance.read_attribute(attribute_from)),
+                                    attribute_from => nil)
+          end
+        end
+      end
+    end
+  end
+end

lib/gitlab/background_migration/redact_links.rb

@@ -4,8 +4,11 @@
 module Gitlab
   module BackgroundMigration
     class RedactLinks
+<<<<<<< HEAD
       prepend EE::Gitlab::BackgroundMigration::RedactLinks
 
+=======
+>>>>>>> upstream/master
       module Redactable
         extend ActiveSupport::Concern
 

lib/gitlab/ci/parsers/test/junit.rb

@@ -14,10 +14,10 @@ module Gitlab
               test_case = create_test_case(test_case)
               test_suite.add_test_case(test_case)
             end
-          rescue REXML::ParseException => e
-            raise JunitParserError, "XML parsing failed: #{e.message}"
-          rescue => e
-            raise JunitParserError, "JUnit parsing failed: #{e.message}"
+          rescue REXML::ParseException
+            raise JunitParserError, "XML parsing failed"
+          rescue
+            raise JunitParserError, "JUnit parsing failed"
           end
 
           private

lib/gitlab/crypto_helper.rb

+# frozen_string_literal: true
+
+module Gitlab
+  module CryptoHelper
+    extend self
+
+    AES256_GCM_OPTIONS = {
+      algorithm: 'aes-256-gcm',
+      key: Settings.attr_encrypted_db_key_base_truncated,
+      iv: Settings.attr_encrypted_db_key_base_truncated[0..11]
+    }.freeze
+
+    def sha256(value)
+      salt = Settings.attr_encrypted_db_key_base_truncated
+      ::Digest::SHA256.base64digest("#{value}#{salt}")
+    end
+
+    def aes256_gcm_encrypt(value)
+      encrypted_token = Encryptor.encrypt(AES256_GCM_OPTIONS.merge(value: value))
+      Base64.encode64(encrypted_token)
+    end
+
+    def aes256_gcm_decrypt(value)
+      return unless value
+
+      encrypted_token = Base64.decode64(value)
+      Encryptor.decrypt(AES256_GCM_OPTIONS.merge(value: encrypted_token))
+    end
+  end
+end

lib/gitlab/url_blocker.rb

@@ -32,6 +32,7 @@ module Gitlab
         end
 
         validate_localhost!(addrs_info) unless allow_localhost
+        validate_loopback!(addrs_info) unless allow_localhost
         validate_local_network!(addrs_info) unless allow_local_network
         validate_link_local!(addrs_info) unless allow_local_network
 
@@ -86,6 +87,12 @@ module Gitlab
         raise BlockedUrlError, "Requests to localhost are not allowed"
       end
 
+      def validate_loopback!(addrs_info)
+        return unless addrs_info.any? { |addr| addr.ipv4_loopback? || addr.ipv6_loopback? }
+
+        raise BlockedUrlError, "Requests to loopback addresses are not allowed"
+      end
+
       def validate_local_network!(addrs_info)
         return unless addrs_info.any? { |addr| addr.ipv4_private? || addr.ipv6_sitelocal? }
 

lib/tasks/tokens.rake

 require_relative '../../app/models/concerns/token_authenticatable.rb'
+require_relative '../../app/models/concerns/token_authenticatable_strategies/base.rb'
+require_relative '../../app/models/concerns/token_authenticatable_strategies/insecure.rb'
+require_relative '../../app/models/concerns/token_authenticatable_strategies/digest.rb'
 
 namespace :tokens do
   desc "Reset all GitLab incoming email tokens"
@@ -26,13 +29,6 @@ class TmpUser < ActiveRecord::Base
 
   self.table_name = 'users'
 
-  def reset_incoming_email_token!
-    write_new_token(:incoming_email_token)
-    save!(validate: false)
-  end
-
-  def reset_feed_token!
-    write_new_token(:feed_token)
-    save!(validate: false)
-  end
+  add_authentication_token_field :incoming_email_token, token_generator: -> { SecureRandom.hex.to_i(16).to_s(36) }
+  add_authentication_token_field :feed_token
 end

qa/qa.rb

@@ -53,7 +53,7 @@ module QA
       autoload :DeployKey, 'qa/factory/resource/deploy_key'
       autoload :DeployToken, 'qa/factory/resource/deploy_token'
       autoload :Branch, 'qa/factory/resource/branch'
-      autoload :SecretVariable, 'qa/factory/resource/secret_variable'
+      autoload :CiVariable, 'qa/factory/resource/ci_variable'
       autoload :Runner, 'qa/factory/resource/runner'
       autoload :PersonalAccessToken, 'qa/factory/resource/personal_access_token'
       autoload :KubernetesCluster, 'qa/factory/resource/kubernetes_cluster'
@@ -183,7 +183,7 @@ module QA
         autoload :DeployKeys, 'qa/page/project/settings/deploy_keys'
         autoload :DeployTokens, 'qa/page/project/settings/deploy_tokens'
         autoload :ProtectedBranches, 'qa/page/project/settings/protected_branches'
-        autoload :SecretVariables, 'qa/page/project/settings/secret_variables'
+        autoload :CiVariables, 'qa/page/project/settings/ci_variables'
         autoload :Runners, 'qa/page/project/settings/runners'
         autoload :MergeRequest, 'qa/page/project/settings/merge_request'
         autoload :Members, 'qa/page/project/settings/members'

qa/qa/factory/resource/secret_variable.rb → qa/qa/factory/resource/ci_variable.rb

 module QA
   module Factory
     module Resource
-      class SecretVariable < Factory::Base
+      class CiVariable < Factory::Base
         attr_accessor :key, :value
 
         attribute :project do
           Factory::Resource::Project.fabricate! do |resource|
-            resource.name = 'project-with-secret-variables'
-            resource.description = 'project for adding secret variable test'
+            resource.name = 'project-with-ci-variables'
+            resource.description = 'project for adding CI variable test'
           end
         end
 
@@ -17,7 +17,7 @@ module QA
           Page::Project::Menu.perform(&:click_ci_cd_settings)
 
           Page::Project::Settings::CICD.perform do |setting|
-            setting.expand_secret_variables do |page|
+            setting.expand_ci_variables do |page|
               page.fill_variable(key, value)
 
               page.save_variables

qa/qa/page/project/issue/show.rb

@@ -7,35 +7,42 @@ module QA
         class Show < Page::Base
           include Page::Component::Issuable::Common
 
-          view 'app/views/projects/issues/show.html.haml' do
-            element :issue_details, '.issue-details' # rubocop:disable QA/ElementWithPattern
-            element :title, '.title' # rubocop:disable QA/ElementWithPattern
-          end
-
           view 'app/views/shared/notes/_form.html.haml' do
             element :new_note_form, 'new-note' # rubocop:disable QA/ElementWithPattern
             element :new_note_form, 'attr: :note' # rubocop:disable QA/ElementWithPattern
           end
 
-          view 'app/views/shared/notes/_comment_button.html.haml' do
-            element :comment_button, '%strong Comment' # rubocop:disable QA/ElementWithPattern
+          view 'app/assets/javascripts/notes/components/comment_form.vue' do
+            element :comment_button
+            element :comment_input
           end
 
-          def issue_title
-            find('.issue-details .title').text
+          view 'app/assets/javascripts/notes/components/discussion_filter.vue' do
+            element :discussion_filter
+            element :filter_options
           end
 
           # Adds a comment to an issue
           # attachment option should be an absolute path
           def comment(text, attachment: nil)
-            fill_in(with: text, name: 'note[note]')
+            fill_element :comment_input, text
 
             unless attachment.nil?
               QA::Page::Component::Dropzone.new(self, '.new-note')
                 .attach_file(attachment)
             end
 
-            click_on 'Comment'
+            click_element :comment_button
+          end
+
+          def select_comments_only_filter
+            click_element :discussion_filter
+            all_elements(:filter_options).last.click
+          end
+
+          def select_all_activities_filter
+            click_element :discussion_filter
+            all_elements(:filter_options).first.click
           end
         end
       end

qa/qa/page/project/settings/ci_cd.rb

@@ -25,9 +25,9 @@ module QA # rubocop:disable Naming/FileName
             end
           end
 
-          def expand_secret_variables(&block)
+          def expand_ci_variables(&block)
             expand_section(:variables_settings) do
-              Settings::SecretVariables.perform(&block)
+              Settings::CiVariables.perform(&block)
             end
           end
 

qa/qa/page/project/settings/secret_variables.rb → qa/qa/page/project/settings/ci_variables.rb

@@ -2,7 +2,7 @@ module QA
   module Page
     module Project
       module Settings
-        class SecretVariables < Page::Base
+        class CiVariables < Page::Base
           include Common
 
           view 'app/views/ci/variables/_variable_row.html.haml' do
@@ -12,7 +12,7 @@ module QA
           end
 
           view 'app/views/ci/variables/_index.html.haml' do
-            element :save_variables, '.js-secret-variables-save-button' # rubocop:disable QA/ElementWithPattern
+            element :save_variables, '.js-ci-variables-save-button' # rubocop:disable QA/ElementWithPattern
             element :reveal_values, '.js-secret-value-reveal-button' # rubocop:disable QA/ElementWithPattern
           end
 
@@ -33,7 +33,7 @@ module QA
           end
 
           def save_variables
-            find('.js-secret-variables-save-button').click
+            find('.js-ci-variables-save-button').click
           end
 
           def reveal_variables

qa/qa/specs/features/browser_ui/2_plan/issue/filter_issue_comments_spec.rb

+# frozen_string_literal: true
+
+module QA
+  context 'Plan' do
+    describe 'filter issue comments activities' do
+      let(:issue_title) { 'issue title' }
+
+      it 'user filters comments and activites in an issue' do
+        Runtime::Browser.visit(:gitlab, Page::Main::Login)
+        Page::Main::Login.act { sign_in_using_credentials }
+
+        Factory::Resource::Issue.fabricate! do |issue|
+          issue.title = issue_title
+        end
+
+        expect(page).to have_content(issue_title)
+
+        Page::Project::Issue::Show.perform do |show_page|
+          show_page.select_comments_only_filter
+          show_page.comment('/confidential')
+          show_page.comment('My own comment')
+
+          expect(show_page).not_to have_content("made the issue confidential")
+          expect(show_page).to have_content("My own comment")
+
+          show_page.select_all_activities_filter
+
+          expect(show_page).to have_content("made the issue confidential")
+          expect(show_page).to have_content("My own comment")
+        end
+      end
+    end
+  end
+end

qa/qa/specs/features/browser_ui/3_create/merge_request/squash_merge_request_spec.rb

@@ -25,6 +25,7 @@ module QA
           push.file_content = "Test with unicode characters ❤✓€❄"
         end
 
+        Page::Project::Show.perform(&:wait_for_push)
         merge_request.visit!
 
         expect(page).to have_text('to be squashed')

qa/qa/specs/features/browser_ui/4_verify/secret_variable/add_secret_variable_spec.rb → qa/qa/specs/features/browser_ui/4_verify/ci_variable/add_ci_variable_spec.rb

@@ -2,24 +2,24 @@
 
 module QA
   context 'Verify' do
-    describe 'Secret variable support' do
-      it 'user adds a secret variable' do
+    describe 'CI variable support' do
+      it 'user adds a CI variable' do
         Runtime::Browser.visit(:gitlab, Page::Main::Login)
         Page::Main::Login.act { sign_in_using_credentials }
 
-        Factory::Resource::SecretVariable.fabricate! do |resource|
+        Factory::Resource::CiVariable.fabricate! do |resource|
           resource.key = 'VARIABLE_KEY'
-          resource.value = 'some secret variable'
+          resource.value = 'some CI variable'
         end
 
         Page::Project::Settings::CICD.perform do |settings|
-          settings.expand_secret_variables do |page|
+          settings.expand_ci_variables do |page|
             expect(page).to have_field(with: 'VARIABLE_KEY')
-            expect(page).not_to have_field(with: 'some secret variable')
+            expect(page).not_to have_field(with: 'some CI variable')
 
             page.reveal_variables
 
-            expect(page).to have_field(with: 'some secret variable')
+            expect(page).to have_field(with: 'some CI variable')
           end
         end
       end

qa/qa/specs/features/browser_ui/6_release/deploy_key/clone_using_deploy_key_spec.rb

@@ -55,7 +55,7 @@ module QA
 
           deploy_key_name = "DEPLOY_KEY_#{key.name}_#{key.bits}"
 
-          Factory::Resource::SecretVariable.fabricate! do |resource|
+          Factory::Resource::CiVariable.fabricate! do |resource|
             resource.project = @project
             resource.key = deploy_key_name
             resource.value = key.private_key

qa/qa/specs/features/browser_ui/7_configure/auto_devops/create_project_with_auto_devops_spec.rb

@@ -22,7 +22,7 @@ module QA
 
             # Disable code_quality check in Auto DevOps pipeline as it takes
             # too long and times out the test
-            Factory::Resource::SecretVariable.fabricate! do |resource|
+            Factory::Resource::CiVariable.fabricate! do |resource|
               resource.project = project
               resource.key = 'CODE_QUALITY_DISABLED'
               resource.value = '1'

spec/controllers/application_controller_spec.rb

@@ -792,4 +792,30 @@ describe ApplicationController do
       end
     end
   end
+
+  context 'control headers' do
+    controller(described_class) do
+      def index
+        render json: :ok
+      end
+    end
+
+    context 'user not logged in' do
+      it 'sets the default headers' do
+        get :index
+
+        expect(response.headers['Cache-Control']).to be_nil
+      end
+    end
+
+    context 'user logged in' do
+      it 'sets the default headers' do
+        sign_in(user)
+
+        get :index
+
+        expect(response.headers['Cache-Control']).to eq 'max-age=0, private, must-revalidate, no-store'
+      end
+    end
+  end
 end

spec/controllers/uploads_controller_spec.rb

@@ -5,6 +5,17 @@ shared_examples 'content not cached without revalidation' do
   end
 end
 
+shared_examples 'content not cached without revalidation and no-store' do
+  it 'ensures content will not be cached without revalidation' do
+    # Fixed in newer versions of ActivePack, it will only output a single `private`.
+    if Gitlab.rails5?
+      expect(subject['Cache-Control']).to eq('max-age=0, private, must-revalidate, no-store')
+    else
+      expect(subject['Cache-Control']).to eq('max-age=0, private, must-revalidate, private, no-store')
+    end
+  end
+end
+
 describe UploadsController do
   let!(:user) { create(:user, avatar: fixture_file_upload("spec/fixtures/dk.png", "image/png")) }
 
@@ -177,7 +188,7 @@ describe UploadsController do
             expect(response).to have_gitlab_http_status(200)
           end
 
-          it_behaves_like 'content not cached without revalidation' do
+          it_behaves_like 'content not cached without revalidation and no-store' do
             subject do
               get :show, model: 'user', mounted_as: 'avatar', id: user.id, filename: 'dk.png'
 
@@ -239,7 +250,7 @@ describe UploadsController do
             expect(response).to have_gitlab_http_status(200)
           end
 
-          it_behaves_like 'content not cached without revalidation' do
+          it_behaves_like 'content not cached without revalidation and no-store' do
             subject do
               get :show, model: 'project', mounted_as: 'avatar', id: project.id, filename: 'dk.png'
 
@@ -292,7 +303,7 @@ describe UploadsController do
                 expect(response).to have_gitlab_http_status(200)
               end
 
-              it_behaves_like 'content not cached without revalidation' do
+              it_behaves_like 'content not cached without revalidation and no-store' do
                 subject do
                   get :show, model: 'project', mounted_as: 'avatar', id: project.id, filename: 'dk.png'
 
@@ -344,7 +355,7 @@ describe UploadsController do
             expect(response).to have_gitlab_http_status(200)
           end
 
-          it_behaves_like 'content not cached without revalidation' do
+          it_behaves_like 'content not cached without revalidation and no-store' do
             subject do
               get :show, model: 'group', mounted_as: 'avatar', id: group.id, filename: 'dk.png'
 
@@ -388,7 +399,7 @@ describe UploadsController do
                 expect(response).to have_gitlab_http_status(200)
               end
 
-              it_behaves_like 'content not cached without revalidation' do
+              it_behaves_like 'content not cached without revalidation and no-store' do
                 subject do
                   get :show, model: 'group', mounted_as: 'avatar', id: group.id, filename: 'dk.png'
 
@@ -445,7 +456,7 @@ describe UploadsController do
             expect(response).to have_gitlab_http_status(200)
           end
 
-          it_behaves_like 'content not cached without revalidation' do
+          it_behaves_like 'content not cached without revalidation and no-store' do
             subject do
               get :show, model: 'note', mounted_as: 'attachment', id: note.id, filename: 'dk.png'
 
@@ -498,7 +509,7 @@ describe UploadsController do
                 expect(response).to have_gitlab_http_status(200)
               end
 
-              it_behaves_like 'content not cached without revalidation' do
+              it_behaves_like 'content not cached without revalidation and no-store' do
                 subject do
                   get :show, model: 'note', mounted_as: 'attachment', id: note.id, filename: 'dk.png'
 

spec/features/projects_spec.rb

@@ -322,6 +322,22 @@ describe 'Project' do
     end
   end
 
+  context 'content is not cached after signing out', :js do
+    let(:user) { create(:user, project_view: 'activity') }
+    let(:project) { create(:project, :repository) }
+
+    it 'does not load activity', :js do
+      project.add_maintainer(user)
+      sign_in(user)
+      visit project_path(project)
+      sign_out(user)
+
+      page.evaluate_script('window.history.back()')
+
+      expect(page).not_to have_selector('.event-item')
+    end
+  end
+
   def remove_with_confirm(button_text, confirm_with)
     click_button button_text
     fill_in 'confirm_name_input', with: confirm_with

spec/javascripts/ci_variable_list/ajax_variable_list_spec.js

@@ -24,7 +24,7 @@ describe('AjaxFormVariableList', () => {
     mock = new MockAdapter(axios);
 
     const ajaxVariableListEl = document.querySelector('.js-ci-variable-list-section');
-    saveButton = ajaxVariableListEl.querySelector('.js-secret-variables-save-button');
+    saveButton = ajaxVariableListEl.querySelector('.js-ci-variables-save-button');
     errorBox = container.querySelector('.js-ci-variable-error-box');
     ajaxVariableList = new AjaxFormVariableList({
       container,
@@ -44,7 +44,7 @@ describe('AjaxFormVariableList', () => {
 
   describe('onSaveClicked', () => {
     it('shows loading spinner while waiting for the request', done => {
-      const loadingIcon = saveButton.querySelector('.js-secret-variables-save-loading-icon');
+      const loadingIcon = saveButton.querySelector('.js-ci-variables-save-loading-icon');
 
       mock.onPatch(VARIABLE_PATCH_ENDPOINT).reply(() => {
         expect(loadingIcon.classList.contains(HIDE_CLASS)).toEqual(false);
@@ -172,7 +172,7 @@ describe('AjaxFormVariableList', () => {
       container = document.querySelector('.js-ci-variable-list-section');
 
       const ajaxVariableListEl = document.querySelector('.js-ci-variable-list-section');
-      saveButton = ajaxVariableListEl.querySelector('.js-secret-variables-save-button');
+      saveButton = ajaxVariableListEl.querySelector('.js-ci-variables-save-button');
       errorBox = container.querySelector('.js-ci-variable-error-box');
       ajaxVariableList = new AjaxFormVariableList({
         container,

spec/javascripts/diffs/store/mutations_spec.js

@@ -221,6 +221,7 @@ describe('DiffsStoreMutations', () => {
 
       expect(state.diffFiles[0].parallelDiffLines[0].left.discussions.length).toEqual(1);
       expect(state.diffFiles[0].parallelDiffLines[0].left.discussions[0].id).toEqual(1);
+      expect(state.diffFiles[0].parallelDiffLines[0].right.discussions).toEqual([]);
 
       expect(state.diffFiles[0].highlightedDiffLines[0].discussions.length).toEqual(1);
       expect(state.diffFiles[0].highlightedDiffLines[0].discussions[0].id).toEqual(1);

spec/javascripts/pipelines/pipelines_actions_spec.js

@@ -62,9 +62,13 @@ describe('Pipelines Actions dropdown', () => {
       );
     };
 
-    beforeEach(() => {
+    beforeEach(done => {
       spyOn(Date, 'now').and.callFake(() => new Date('2063-04-04T00:42:00Z').getTime());
       vm = mountComponent(Component, { actions: [scheduledJobAction, expiredJobAction] });
+
+      Vue.nextTick()
+        .then(done)
+        .catch(done.fail);
     });
 
     it('emits postAction event after confirming', () => {

spec/javascripts/vue_mr_widget/components/deployment_spec.js

@@ -211,6 +211,26 @@ describe('Deployment component', () => {
     });
   });
 
+  describe('without changes', () => {
+    beforeEach(() => {
+      window.gon = window.gon || {};
+      window.gon.features = window.gon.features || {};
+      window.gon.features.ciEnvironmentsStatusChanges = true;
+      delete deploymentMockData.changes;
+
+      vm = mountComponent(Component, { deployment: { ...deploymentMockData } });
+    });
+
+    afterEach(() => {
+      delete window.gon.features.ciEnvironmentsStatusChanges;
+    });
+
+    it('renders the link to the review app without dropdown', () => {
+      expect(vm.$el.querySelector('.js-mr-wigdet-deployment-dropdown')).toBeNull();
+      expect(vm.$el.querySelector('.js-deploy-url-feature-flag')).not.toBeNull();
+    });
+  });
+
   describe('deployment status', () => {
     describe('running', () => {
       beforeEach(() => {

spec/javascripts/vue_mr_widget/components/review_app_link_spec.js

+import Vue from 'vue';
+import component from '~/vue_merge_request_widget/components/review_app_link.vue';
+import mountComponent from '../../helpers/vue_mount_component_helper';
+
+describe('review app link', () => {
+  const Component = Vue.extend(component);
+  const props = {
+    link: '/review',
+    cssClass: 'js-link',
+  };
+  let vm;
+  let el;
+
+  beforeEach(() => {
+    vm = mountComponent(Component, props);
+    el = vm.$el;
+  });
+
+  afterEach(() => {
+    vm.$destroy();
+  });
+
+  it('renders provided link as href attribute', () => {
+    expect(el.getAttribute('href')).toEqual(props.link);
+  });
+
+  it('renders provided cssClass as class attribute', () => {
+    expect(el.getAttribute('class')).toEqual(props.cssClass);
+  });
+
+  it('renders View app text', () => {
+    expect(el.textContent.trim()).toEqual('View app');
+  });
+
+  it('renders svg icon', () => {
+    expect(el.querySelector('svg')).not.toBeNull();
+  });
+});

spec/lib/gitlab/background_migration/digest_column_spec.rb

+# frozen_string_literal: true
+
+require 'spec_helper'
+
+describe Gitlab::BackgroundMigration::DigestColumn, :migration, schema: 20180913142237 do
+  let(:personal_access_tokens) { table(:personal_access_tokens) }
+  let(:users) { table(:users) }
+
+  subject { described_class.new }
+
+  describe '#perform' do
+    context 'token is not yet hashed' do
+      before do
+        users.create(id: 1, email: 'user@example.com', projects_limit: 10)
+        personal_access_tokens.create!(id: 1, user_id: 1, name: 'pat-01', token: 'token-01')
+      end
+
+      it 'saves token digest' do
+        expect { subject.perform(PersonalAccessToken, :token, :token_digest, 1, 2) }.to(
+          change { PersonalAccessToken.find(1).token_digest }.from(nil).to(Gitlab::CryptoHelper.sha256('token-01')))
+      end
+
+      it 'erases token' do
+        expect { subject.perform(PersonalAccessToken, :token, :token_digest, 1, 2) }.to(
+          change { PersonalAccessToken.find(1).token }.from('token-01').to(nil))
+      end
+    end
+
+    context 'token is already hashed' do
+      before do
+        users.create(id: 1, email: 'user@example.com', projects_limit: 10)
+        personal_access_tokens.create!(id: 1, user_id: 1, name: 'pat-01', token_digest: 'token-digest-01')
+      end
+
+      it 'does not change existing token digest' do
+        expect { subject.perform(PersonalAccessToken, :token, :token_digest, 1, 2) }.not_to(
+          change { PersonalAccessToken.find(1).token_digest })
+      end
+
+      it 'leaves token empty' do
+        expect { subject.perform(PersonalAccessToken, :token, :token_digest, 1, 2) }.not_to(
+          change { PersonalAccessToken.find(1).token }.from(nil))
+      end
+    end
+  end
+end

spec/lib/gitlab/ci/build/policy/variables_spec.rb

@@ -54,7 +54,7 @@ describe Gitlab::Ci::Build::Policy::Variables do
       expect(policy).not_to be_satisfied_by(pipeline, seed)
     end
 
-    it 'allows to evaluate regular secret variables' do
+    it 'allows to evaluate regular CI variables' do
       create(:ci_variable, project: project, key: 'SECRET', value: 'my secret')
 
       policy = described_class.new(["$SECRET == 'my secret'"])

spec/lib/gitlab/url_blocker_spec.rb

@@ -29,6 +29,16 @@ describe Gitlab::UrlBlocker do
       expect(described_class.blocked_url?('https://gitlab.com/foo/foo.git', protocols: ['http'])).to be true
     end
 
+    it 'returns true for localhost IPs' do
+      expect(described_class.blocked_url?('https://0.0.0.0/foo/foo.git')).to be true
+      expect(described_class.blocked_url?('https://[::1]/foo/foo.git')).to be true
+      expect(described_class.blocked_url?('https://127.0.0.1/foo/foo.git')).to be true
+    end
+
+    it 'returns true for loopback IP' do
+      expect(described_class.blocked_url?('https://127.0.0.2/foo/foo.git')).to be true
+    end
+
     it 'returns true for alternative version of 127.0.0.1 (0177.1)' do
       expect(described_class.blocked_url?('https://0177.1:65535/foo/foo.git')).to be true
     end
@@ -84,6 +94,16 @@ describe Gitlab::UrlBlocker do
           end
         end
 
+        it 'allows localhost endpoints' do
+          expect(described_class).not_to be_blocked_url('http://0.0.0.0', allow_localhost: true)
+          expect(described_class).not_to be_blocked_url('http://localhost', allow_localhost: true)
+          expect(described_class).not_to be_blocked_url('http://127.0.0.1', allow_localhost: true)
+        end
+
+        it 'allows loopback endpoints' do
+          expect(described_class).not_to be_blocked_url('http://127.0.0.2', allow_localhost: true)
+        end
+
         it 'allows IPv4 link-local endpoints' do
           expect(described_class).not_to be_blocked_url('http://169.254.169.254')
           expect(described_class).not_to be_blocked_url('http://169.254.168.100')
@@ -122,7 +142,7 @@ describe Gitlab::UrlBlocker do
       end
 
       def stub_domain_resolv(domain, ip)
-        allow(Addrinfo).to receive(:getaddrinfo).with(domain, any_args).and_return([double(ip_address: ip, ipv4_private?: true, ipv6_link_local?: false)])
+        allow(Addrinfo).to receive(:getaddrinfo).with(domain, any_args).and_return([double(ip_address: ip, ipv4_private?: true, ipv6_link_local?: false, ipv4_loopback?: false, ipv6_loopback?: false)])
       end
 
       def unstub_domain_resolv

spec/migrations/schedule_digest_personal_access_tokens_spec.rb

+require 'spec_helper'
+require Rails.root.join('db', 'post_migrate', '20180913142237_schedule_digest_personal_access_tokens.rb')
+
+describe ScheduleDigestPersonalAccessTokens, :migration, :sidekiq do
+  let(:personal_access_tokens) { table(:personal_access_tokens) }
+  let(:users) { table(:users) }
+
+  before do
+    stub_const("#{described_class.name}::BATCH_SIZE", 4)
+
+    users.create(id: 1, email: 'user@example.com', projects_limit: 10)
+
+    personal_access_tokens.create!(id: 1, user_id: 1, name: 'pat-01', token: 'token-01')
+    personal_access_tokens.create!(id: 2, user_id: 1, name: 'pat-02', token: 'token-02')
+    personal_access_tokens.create!(id: 3, user_id: 1, name: 'pat-03', token_digest: 'token_digest')
+    personal_access_tokens.create!(id: 4, user_id: 1, name: 'pat-04', token: 'token-04')
+    personal_access_tokens.create!(id: 5, user_id: 1, name: 'pat-05', token: 'token-05')
+    personal_access_tokens.create!(id: 6, user_id: 1, name: 'pat-06', token: 'token-06')
+  end
+
+  it 'correctly schedules background migrations' do
+    Sidekiq::Testing.fake! do
+      migrate!
+
+      expect(described_class::MIGRATION).to(
+        be_scheduled_delayed_migration(
+          5.minutes, 'PersonalAccessToken', 'token', 'token_digest', 1, 5))
+      expect(described_class::MIGRATION).to(
+        be_scheduled_delayed_migration(
+          10.minutes, 'PersonalAccessToken', 'token', 'token_digest', 6, 6))
+      expect(BackgroundMigrationWorker.jobs.size).to eq 2
+    end
+  end
+
+  it 'schedules background migrations' do
+    perform_enqueued_jobs do
+      plain_text_token = 'token IS NOT NULL'
+
+      expect(personal_access_tokens.where(plain_text_token).count).to eq 5
+
+      migrate!
+
+      expect(personal_access_tokens.where(plain_text_token).count).to eq 0
+    end
+  end
+end

spec/models/ci/build_spec.rb

@@ -2029,17 +2029,17 @@ describe Ci::Build do
       it { is_expected.to include(tag_variable) }
     end
 
-    context 'when secret variable is defined' do
-      let(:secret_variable) do
+    context 'when CI variable is defined' do
+      let(:ci_variable) do
         { key: 'SECRET_KEY', value: 'secret_value', public: false }
       end
 
       before do
         create(:ci_variable,
-               secret_variable.slice(:key, :value).merge(project: project))
+               ci_variable.slice(:key, :value).merge(project: project))
       end
 
-      it { is_expected.to include(secret_variable) }
+      it { is_expected.to include(ci_variable) }
     end
 
     context 'when protected variable is defined' do
@@ -2074,17 +2074,17 @@ describe Ci::Build do
       end
     end
 
-    context 'when group secret variable is defined' do
-      let(:secret_variable) do
+    context 'when group CI variable is defined' do
+      let(:ci_variable) do
         { key: 'SECRET_KEY', value: 'secret_value', public: false }
       end
 
       before do
         create(:ci_group_variable,
-               secret_variable.slice(:key, :value).merge(group: group))
+               ci_variable.slice(:key, :value).merge(group: group))
       end
 
-      it { is_expected.to include(secret_variable) }
+      it { is_expected.to include(ci_variable) }
     end
 
     context 'when group protected variable is defined' do
@@ -2358,8 +2358,13 @@ describe Ci::Build do
           allow_any_instance_of(Project)
             .to receive(:predefined_variables) { [project_pre_var] }
 
+<<<<<<< HEAD
           allow_any_instance_of(EE::Project)
             .to receive(:secret_variables_for)
+=======
+          allow_any_instance_of(Project)
+            .to receive(:ci_variables_for)
+>>>>>>> upstream/master
             .with(ref: 'master', environment: nil) do
             [create(:ci_variable, key: 'secret', value: 'value')]
           end
@@ -2510,7 +2515,7 @@ describe Ci::Build do
   end
 
   describe '#scoped_variables_hash' do
-    context 'when overriding secret variables' do
+    context 'when overriding CI variables' do
       before do
         project.variables.create!(key: 'MY_VAR', value: 'my value 1')
         pipeline.variables.create!(key: 'MY_VAR', value: 'my value 2')

spec/models/concerns/token_authenticatable_spec.rb

@@ -2,8 +2,6 @@ require 'spec_helper'
 
 shared_examples 'TokenAuthenticatable' do
   describe 'dynamically defined methods' do
-    it { expect(described_class).to be_private_method_defined(:generate_token) }
-    it { expect(described_class).to be_private_method_defined(:write_new_token) }
     it { expect(described_class).to respond_to("find_by_#{token_field}") }
     it { is_expected.to respond_to("ensure_#{token_field}") }
     it { is_expected.to respond_to("set_#{token_field}") }
@@ -66,13 +64,275 @@ describe ApplicationSetting, 'TokenAuthenticatable' do
   end
 
   describe 'multiple token fields' do
-    before do
+    before(:all) do
       described_class.send(:add_authentication_token_field, :yet_another_token)
     end
 
-    describe '.token_fields' do
-      subject { described_class.authentication_token_fields }
-      it { is_expected.to include(:runners_registration_token, :yet_another_token) }
+    it { is_expected.to respond_to(:ensure_runners_registration_token) }
+    it { is_expected.to respond_to(:ensure_yet_another_token) }
+  end
+
+  describe 'setting same token field multiple times' do
+    subject { described_class.send(:add_authentication_token_field, :runners_registration_token) }
+
+    it 'raises error' do
+      expect {subject}.to raise_error(ArgumentError)
+    end
+  end
+end
+
+describe PersonalAccessToken, 'TokenAuthenticatable' do
+  let(:personal_access_token_name) { 'test-pat-01' }
+  let(:token_value) { 'token' }
+  let(:user) { create(:user) }
+  let(:personal_access_token) do
+    described_class.new(name: personal_access_token_name,
+                        user_id: user.id,
+                        scopes: [:api],
+                        token: token,
+                        token_digest: token_digest)
+  end
+
+  before do
+    allow(Devise).to receive(:friendly_token).and_return(token_value)
+  end
+
+  describe '.find_by_token' do
+    subject { PersonalAccessToken.find_by_token(token_value) }
+
+    before do
+      personal_access_token.save
+    end
+
+    context 'token_digest already exists' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256(token_value) }
+
+      it 'finds the token' do
+        expect(subject).not_to be_nil
+        expect(subject.name).to eql(personal_access_token_name)
+      end
+    end
+
+    context 'token_digest does not exist' do
+      let(:token) { token_value }
+      let(:token_digest) { nil }
+
+      it 'finds the token' do
+        expect(subject).not_to be_nil
+        expect(subject.name).to eql(personal_access_token_name)
+      end
+    end
+  end
+
+  describe '#set_token'   do
+    let(:new_token_value) { 'new-token' }
+    subject { personal_access_token.set_token(new_token_value) }
+
+    context 'token_digest already exists' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256(token_value) }
+
+      it 'overwrites token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(new_token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(new_token_value))
+      end
+    end
+
+    context 'token_digest does not exist but token does' do
+      let(:token) { token_value }
+      let(:token_digest) { nil }
+
+      it 'creates new token_digest and clears token' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(new_token_value)
+        expect(personal_access_token.token_digest).to eql(Gitlab::CryptoHelper.sha256(new_token_value))
+      end
+    end
+
+    context 'token_digest does not exist, nor token' do
+      let(:token) { nil }
+      let(:token_digest) { nil }
+
+      it 'creates new token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(new_token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(new_token_value))
+      end
+    end
+  end
+
+  describe '#ensure_token' do
+    subject { personal_access_token.ensure_token }
+
+    context 'token_digest already exists' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256(token_value) }
+
+      it 'does not change token fields' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to be_nil
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token_digest does not exist but token does' do
+      let(:token) { token_value }
+      let(:token_digest) { nil }
+
+      it 'does not change token fields' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to eql(token_value)
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to be_nil
+      end
+    end
+
+    context 'token_digest does not exist, nor token' do
+      let(:token) { nil }
+      let(:token_digest) { nil }
+
+      it 'creates token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+  end
+
+  describe '#ensure_token!' do
+    subject { personal_access_token.ensure_token! }
+
+    context 'token_digest already exists' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256(token_value) }
+
+      it 'does not change token fields' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to be_nil
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token_digest does not exist but token does' do
+      let(:token) { token_value }
+      let(:token_digest) { nil }
+
+      it 'does not change token fields' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to eql(token_value)
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to be_nil
+      end
+    end
+
+    context 'token_digest does not exist, nor token' do
+      let(:token) { nil }
+      let(:token_digest) { nil }
+
+      it 'creates token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+  end
+
+  describe '#reset_token!' do
+    subject { personal_access_token.reset_token! }
+
+    context 'token_digest already exists' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256('old-token') }
+
+      it 'creates new token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token_digest does not exist but token does' do
+      let(:token) { 'old-token' }
+      let(:token_digest) { nil }
+
+      it 'creates new token_digest and clears token' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql(Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token_digest does not exist, nor token' do
+      let(:token) { nil }
+      let(:token_digest) { nil }
+
+      it 'creates new token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token_digest exists and newly generated token would be the same' do
+      let(:token) { nil }
+      let(:token_digest) { Gitlab::CryptoHelper.sha256('old-token') }
+
+      before do
+        personal_access_token.save
+        allow(Devise).to receive(:friendly_token).and_return(
+          'old-token', token_value, 'boom!')
+      end
+
+      it 'regenerates a new token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
+    end
+
+    context 'token exists and newly generated token would be the same' do
+      let(:token) { 'old-token' }
+      let(:token_digest) { nil }
+
+      before do
+        personal_access_token.save
+        allow(Devise).to receive(:friendly_token).and_return(
+          'old-token', token_value, 'boom!')
+      end
+
+      it 'regenerates a new token_digest' do
+        subject
+
+        expect(personal_access_token.read_attribute('token')).to be_nil
+        expect(personal_access_token.token).to eql(token_value)
+        expect(personal_access_token.token_digest).to eql( Gitlab::CryptoHelper.sha256(token_value))
+      end
     end
   end
 end

spec/models/group_spec.rb

@@ -653,10 +653,10 @@ describe Group do
     end
   end
 
-  describe '#secret_variables_for' do
+  describe '#ci_variables_for' do
     let(:project) { create(:project, group: group) }
 
-    let!(:secret_variable) do
+    let!(:ci_variable) do
       create(:ci_group_variable, value: 'secret', group: group)
     end
 
@@ -664,11 +664,11 @@ describe Group do
       create(:ci_group_variable, :protected, value: 'protected', group: group)
     end
 
-    subject { group.secret_variables_for('ref', project) }
+    subject { group.ci_variables_for('ref', project) }
 
     shared_examples 'ref is protected' do
       it 'contains all the variables' do
-        is_expected.to contain_exactly(secret_variable, protected_variable)
+        is_expected.to contain_exactly(ci_variable, protected_variable)
       end
     end
 
@@ -678,8 +678,8 @@ describe Group do
           default_branch_protection: Gitlab::Access::PROTECTION_NONE)
       end
 
-      it 'contains only the secret variables' do
-        is_expected.to contain_exactly(secret_variable)
+      it 'contains only the CI variables' do
+        is_expected.to contain_exactly(ci_variable)
       end
     end
 
@@ -712,9 +712,9 @@ describe Group do
       end
 
       it 'returns all variables belong to the group and parent groups' do
-        expected_array1 = [protected_variable, secret_variable]
+        expected_array1 = [protected_variable, ci_variable]
         expected_array2 = [variable_child, variable_child_2, variable_child_3]
-        got_array = group_child_3.secret_variables_for('ref', project).to_a
+        got_array = group_child_3.ci_variables_for('ref', project).to_a
 
         expect(got_array.shift(2)).to contain_exactly(*expected_array1)
         expect(got_array).to eq(expected_array2)

spec/models/lfs_object_spec.rb

@@ -2,12 +2,6 @@ require 'spec_helper'
 
 describe LfsObject do
   describe '#local_store?' do
-    it 'returns true when file_store is nil' do
-      subject.file_store = nil
-
-      expect(subject.local_store?).to eq true
-    end
-
     it 'returns true when file_store is equal to LfsObjectUploader::Store::LOCAL' do
       subject.file_store = LfsObjectUploader::Store::LOCAL
 
@@ -83,19 +77,6 @@ describe LfsObject do
     describe 'file is being stored' do
       let(:lfs_object) { create(:lfs_object, :with_file) }
 
-      context 'when object has nil store' do
-        before do
-          lfs_object.update_column(:file_store, nil)
-          lfs_object.reload
-        end
-
-        it 'is stored locally' do
-          expect(lfs_object.file_store).to be(nil)
-          expect(lfs_object.file).to be_file_storage
-          expect(lfs_object.file.object_store).to eq(ObjectStorage::Store::LOCAL)
-        end
-      end
-
       context 'when existing object has local store' do
         it 'is stored locally' do
           expect(lfs_object.file_store).to be(ObjectStorage::Store::LOCAL)

spec/models/personal_access_token_spec.rb

@@ -49,18 +49,36 @@ describe PersonalAccessToken do
 
   describe 'Redis storage' do
     let(:user_id) { 123 }
-    let(:token) { 'abc000foo' }
+    let(:token) { 'KS3wegQYXBLYhQsciwsj' }
 
-    before do
-      subject.redis_store!(user_id, token)
+    context 'reading encrypted data' do
+      before do
+        subject.redis_store!(user_id, token)
+      end
+
+      it 'returns stored data' do
+        expect(subject.redis_getdel(user_id)).to eq(token)
+      end
     end
 
-    it 'returns stored data' do
-      expect(subject.redis_getdel(user_id)).to eq(token)
+    context 'reading unencrypted data' do
+      before do
+        Gitlab::Redis::SharedState.with do |redis|
+          redis.set(described_class.redis_shared_state_key(user_id),
+                    token,
+                    ex: PersonalAccessToken::REDIS_EXPIRY_TIME)
+        end
+      end
+
+      it 'returns stored data unmodified' do
+        expect(subject.redis_getdel(user_id)).to eq(token)
+      end
     end
 
     context 'after deletion' do
       before do
+        subject.redis_store!(user_id, token)
+
         expect(subject.redis_getdel(user_id)).to eq(token)
       end
 

spec/models/project_spec.rb

@@ -2713,10 +2713,10 @@ describe Project do
     end
   end
 
-  describe '#secret_variables_for' do
+  describe '#ci_variables_for' do
     let(:project) { create(:project) }
 
-    let!(:secret_variable) do
+    let!(:ci_variable) do
       create(:ci_variable, value: 'secret', project: project)
     end
 
@@ -2724,7 +2724,7 @@ describe Project do
       create(:ci_variable, :protected, value: 'protected', project: project)
     end
 
-    subject { project.reload.secret_variables_for(ref: 'ref') }
+    subject { project.reload.ci_variables_for(ref: 'ref') }
 
     before do
       stub_application_setting(
@@ -2733,13 +2733,13 @@ describe Project do
 
     shared_examples 'ref is protected' do
       it 'contains all the variables' do
-        is_expected.to contain_exactly(secret_variable, protected_variable)
+        is_expected.to contain_exactly(ci_variable, protected_variable)
       end
     end
 
     context 'when the ref is not protected' do
-      it 'contains only the secret variables' do
-        is_expected.to contain_exactly(secret_variable)
+      it 'contains only the CI variables' do
+        is_expected.to contain_exactly(ci_variable)
       end
     end
 

spec/models/user_spec.rb

@@ -758,6 +758,14 @@ describe User do
 
       expect(user.incoming_email_token).not_to be_blank
     end
+
+    it 'uses SecureRandom to generate the incoming email token' do
+      expect(SecureRandom).to receive(:hex).and_return('3b8ca303')
+
+      user = create(:user)
+
+      expect(user.incoming_email_token).to eql('gitlab')
+    end
   end
 
   describe '#ensure_user_rights_and_limits' do

spec/presenters/merge_request_presenter_spec.rb

@@ -508,6 +508,15 @@ describe MergeRequestPresenter do
       is_expected
         .to eq("<a href=\"/#{resource.source_project.full_path}/tree/#{resource.source_branch}\">#{resource.source_branch}</a>")
     end
+
+    it 'escapes html, when source_branch does not exist' do
+      xss_attempt = "<img src='x' onerror=alert('bad stuff') />"
+
+      allow(resource).to receive(:source_branch) { xss_attempt }
+      allow(resource).to receive(:source_branch_exists?) { false }
+
+      is_expected.to eq(ERB::Util.html_escape(xss_attempt))
+    end
   end
 
   describe '#rebase_path' do

spec/requests/api/wikis_spec.rb

@@ -158,6 +158,16 @@ describe API::Wikis do
       expect(json_response.size).to eq(1)
       expect(json_response['error']).to eq('file is missing')
     end
+
+    it 'responds with validation error on invalid temp file' do
+      payload[:file] = { tempfile: '/etc/hosts' }
+
+      post(api(url, user), payload)
+
+      expect(response).to have_gitlab_http_status(400)
+      expect(json_response.size).to eq(1)
+      expect(json_response['error']).to eq('file is invalid')
+    end
   end
 
   describe 'GET /projects/:id/wikis' do

spec/services/merge_requests/refresh_service_spec.rb

@@ -324,6 +324,66 @@ describe MergeRequests::RefreshService do
       end
     end
 
+    context 'forked projects with the same source branch name as target branch' do
+      let!(:first_commit) do
+        @fork_project.repository.create_file(@user, 'test1.txt', 'Test data',
+                                             message: 'Test commit',
+                                             branch_name: 'master')
+      end
+      let!(:second_commit) do
+        @fork_project.repository.create_file(@user, 'test2.txt', 'More test data',
+                                             message: 'Second test commit',
+                                             branch_name: 'master')
+      end
+      let!(:forked_master_mr) do
+        create(:merge_request,
+               source_project: @fork_project,
+               source_branch: 'master',
+               target_branch: 'master',
+               target_project: @project)
+      end
+      let(:force_push_commit) { @project.commit('feature').id }
+
+      it 'should reload a new diff for a push to the forked project' do
+        expect do
+          service.new(@fork_project, @user).execute(@oldrev, first_commit, 'refs/heads/master')
+          reload_mrs
+        end.to change { forked_master_mr.merge_request_diffs.count }.by(1)
+      end
+
+      it 'should reload a new diff for a force push to the source branch' do
+        expect do
+          service.new(@fork_project, @user).execute(@oldrev, force_push_commit, 'refs/heads/master')
+          reload_mrs
+        end.to change { forked_master_mr.merge_request_diffs.count }.by(1)
+      end
+
+      it 'should reload a new diff for a force push to the target branch' do
+        expect do
+          service.new(@project, @user).execute(@oldrev, force_push_commit, 'refs/heads/master')
+          reload_mrs
+        end.to change { forked_master_mr.merge_request_diffs.count }.by(1)
+      end
+
+      it 'should reload a new diff for a push to the target project that contains a commit in the MR' do
+        expect do
+          service.new(@project, @user).execute(@oldrev, first_commit, 'refs/heads/master')
+          reload_mrs
+        end.to change { forked_master_mr.merge_request_diffs.count }.by(1)
+      end
+
+      it 'should not increase the diff count for a new push to target branch' do
+        new_commit = @project.repository.create_file(@user, 'new-file.txt', 'A new file',
+                                                     message: 'This is a test',
+                                                     branch_name: 'master')
+
+        expect do
+          service.new(@project, @user).execute(@newrev, new_commit, 'refs/heads/master')
+          reload_mrs
+        end.not_to change { forked_master_mr.merge_request_diffs.count }
+      end
+    end
+
     context 'push to origin repo target branch after fork project was removed' do
       before do
         @fork_project.destroy

spec/support/features/variable_list_shared_examples.rb

@@ -5,7 +5,7 @@ shared_examples 'variable list' do
     end
   end
 
-  it 'adds new secret variable' do
+  it 'adds new CI variable' do
     page.within('.js-ci-variable-list-section .js-row:last-child') do
       find('.js-ci-variable-input-key').set('key')
       find('.js-ci-variable-input-value').set('key value')

vendor/jupyter/values.yaml

@@ -16,7 +16,7 @@ singleuser:
   lifecycleHooks:
     postStart:
       exec:
-        command: ["git", "clone", "https://gitlab.com/gitlab-org/nurtch-demo.git", "DevOps-Runbook-Demo"]
+        command: ["sh", "-c", "git clone https://gitlab.com/gitlab-org/nurtch-demo.git DevOps-Runbook-Demo || true"]
 
 ingress:
  enabled: true