Fix prevent_secrets checkbox on admin view

fixes #1059

See merge request !761

New update guide from 8.13 CE to 8.13 EE

Following the steps from https://gitlab.com/gitlab-org/release-tools/blob/master/doc/release-candidates.md#creating-rc1.

See merge request !765

[ci skip]
Signed-off-by: Rémy Coutable <remy@rymai.me>

Add missing url param to ajax call

The `url` param was missing from the ajax call.

This bug happened because the `url` param was not set. jQuery defaults to `location.href`. BUT if the user came to the protected branches page from another page a previously set `ajaxSettings.url` was used as default url (which defaults to `location.href`) so when the user submitted the form the request was made to a  completely wrong `url`. Refreshing the page was working because `ajaxSettings.url` was set to the current page'`location.href` and that was the correct URL.

This MR ensures the url will always be set with the right one.

Fixes https://gitlab.com/gitlab-org/gitlab-ce/issues/22020

See merge request !760

Ignore unknown project ID in RepositoryUpdateMirrorWorker

Projects that are in pending_delete could still trigger the mirror,
leading to undefined method `mark_import_as_failed` errors and
repeated Sidekiq retries.

See merge request !754

Projects that are in pending_delete could still trigger the mirror,
leading to undefined method `mark_import_as_failed` errors and
repeated Sidekiq retries.

CE upstream

CE changes https://gitlab.com/gitlab-org/gitlab-ce/compare/1d51bc7dfd04886fa5af69a60bb509691d697813...73b4eecddecf1e86d5e0c26166e2027583b680cf

See merge request !752

Fixed a broken documentation link to the wiki-specific-markdown.

## What does this MR do?
Fixes a broken link

## Are there points in the code the reviewer needs to double check?
Well, it's a one line change, so it couldn't hurt, right?

## Why was this MR needed?
Because broken links make us look like chumps. :)

## Screenshots (if relevant)

## Does this MR meet the acceptance criteria?
Probably not.

## What are the relevant issue numbers?
Closes https://gitlab.com/gitlab-org/gitlab-ce/issues/21760.

See merge request !6117

Keep API mounts in alphabetical order

## What does this MR do?

Just a cosmetic change to keep the API mounts in order.

See merge request !6515

Fixes issue with rails reserved keyword type exporting/importing services.

The attribute `type`in services was being ignored by Import/Export. Added `type` as a method call in the export, as `type` gets ignored invoking `to_json`, manually adding this as a method in `import_export.yml` solves the problem. 

On a different note, I found assigning a title directly to `CustomIssueTrackerService` didn't play very well with `prop_accessor`:

```ruby
> CustomIssueTrackerService.new(title: 'asdf')
NoMethodError: undefined method `[]=' for nil:NilClass
> CustomIssueTrackerService.new(title: nil)
NoMethodError: undefined method `[]=' for nil:NilClass
```

This was also causing the Import/Export to failed... So I added a custom setter that fixed the problem.

Fixes https://gitlab.com/gitlab-org/gitlab-ce/issues/22461

See merge request !6499

Replace deprecated Devise helper with new helper

Closes #22357

See merge request !6462

Fix trivial typo in docs



See merge request !5849

Fixes issue with rails reserved keyword type exporting/importing services. Also fixed CustomIssueTrackerService title setter and added relevant specs.

Remove gitlab_meta gem



See merge request !6510

- Presumably got in during conflict resolution
- This was causing the build to fail (constraint name already taken)

Fix typo in README

[ci skip]

See merge request !6512

cannonical -> canonical

Use base SHA for patches and diffs

## What does this MR do?

Switch from using 'start SHA' to 'base SHA' for patches and diffs

## Are there points in the code the reviewer needs to double check?

## Why was this MR needed?

Makes the downloaded patches and diffs on the merge request page match the frontend-rendered "changes" in these scenarios:

* Unpatched gitlab-workhorse, downloading patchsets of open MRs (https://gitlab.com/gitlab-org/gitlab-workhorse/merge_requests/68)
* Unpatched gitlab-workhorse, downloading diffs of open and merged MRs
* Patched gitlab-workhorse, downloading patchsets of merged merge requests

## What are the relevant issue numbers?

Closes #22229

See merge request !6435

Fix typo in README.md

## What does this MR do?

Fixes a typo in the documentation of the gitlab-ci-runner environment variables

See merge request !6340

Fix CHANGELOG.



See merge request !759

Fix CHANGELOG.

cc: @stanhu

See merge request !6505

Milestone tab badges

### What does this MR do?
Adds count badges to the tabs on the Milestone page to mirror the Issue page.

### Are there points in the code the reviewer needs to double check?
CSS: Padding was added to the `.milestone` element to make expired milestones look good.

### Why was this MR needed?
For consistency with other tabs

### What are the relevant issue numbers?
Closes #20114 

### Screenshots (if relevant)

**Before**
<img src="/uploads/1f75853a863a9058ee409916b7ee4057/Screen_Shot_2016-07-22_at_13.22.20.png" width="362">

**After**
<img src="/uploads/8a058290850f571db249dd9b23f5138d/Screen_Shot_2016-07-22_at_13.21.58.png"  width="303">

![Screen_Shot_2016-08-23_at_1.42.56_AM](/uploads/b072dc6bdf505b2fce46660beaf0eae7/Screen_Shot_2016-08-23_at_1.42.56_AM.png)

![Screen_Shot_2016-08-23_at_1.43.15_AM](/uploads/e7440bf2aa628aa4dba63863083699c0/Screen_Shot_2016-08-23_at_1.43.15_AM.png)

### Does this MR meet the acceptance criteria?

- [x] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- Tests
  - [x] Added for this feature/bug
  - [x] All builds are passing
- [ ] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [x] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [ ] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !5946

Removed z-index from flash container

## What does this MR do?

Fixes a styling bug where the flash container would be above the header when scrolling.

Before it looked like this when scrolling:

![Screen_Shot_2016-09-08_at_14.06.36](/uploads/d639287329643d26454a997e3917bc53/Screen_Shot_2016-09-08_at_14.06.36.png)

Now it looks like this when scrolling:

![Screen_Shot_2016-09-08_at_14.07.37](/uploads/7c1c5e38adc9b9011558d4190d3520fe/Screen_Shot_2016-09-08_at_14.07.37.png)

## Are there points in the code the reviewer needs to double check?

I can't think of any good reason why this would need to be above another element. But you never know!

Closes #20713 

See merge request !6264

Merge branch '22459-tooltips-for-mini-pipeline-graph-in-pipeline-list-use-the-svg-instead-of-container' into 'master'

Fixed pipeline stage svg link tooltip

## What does this MR do?

Adds `display: block` to the `.stage-container` class which allows the dimensional constraints of the link to be calculated correctly so the `mouseover` events are fired correctly.

## Are there points in the code the reviewer needs to double check?

## Why was this MR needed?

Hovering the stage icons to reveal their SVG was buggy and would flash.

## Screenshots (if relevant)

![2016-09-23_14.59.17](/uploads/ad4c85fb08f032cc3f5d17749d3f7091/2016-09-23_14.59.17.gif)

I just realised that Gifox actually adds its own mouse that isn't positioned or sized correctly so this doesn't look right, you'll have to `checkout` to confirm.

/cc @dimitrieh I found a con about Gifox! 😆 

## Does this MR meet the acceptance criteria?

- [ ] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- Tests
  - [ ] Added for this feature/bug
  - [ ] All builds are passing
- [ ] Conform by the [merge request performance guides](http://docs.gitlab.com/ce/development/merge_request_performance_guidelines.html)
- [ ] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [ ] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [ ] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

## What are the relevant issue numbers?


Closes #22459

See merge request !6494

Fix typo in protected_branches usage data



See merge request !758

8-12-stable-ee -> MASTER

/cc @stanhu

See merge request !756