numpy: upgrade version to 1.22.4

component/cython/buildout.cfg

@@ -3,7 +3,8 @@ parts = cython
 
 [cython]
 recipe = zc.recipe.egg:custom
-egg = cython
+egg = Cython
+interpreter = python_with_cython
 
 [versions]
-Cython = 0.29.21
+Cython = 0.29.24

component/numpy/buildout.cfg

 [buildout]
-parts = numpy
+extends =
+  ../cython/buildout.cfg
+
+parts =
+  numpy
+
+[numpy-env]
+BLAS=None
+LAPACK=None
+ATLAS=None
 
 [numpy]
 recipe = zc.recipe.egg:custom
-egg = numpy
+executable = ${cython:interpreter}
+egg =
+  numpy
 
+[numpy:sys.version_info >= (3,8)]
+environment = numpy-env
+setup-eggs = ${cython:egg}
 
 [versions]
 numpy = 1.16.4
+
+[versions:sys.version_info >= (3,8)]
+numpy = 1.22.0

component/scipy/buildout.cfg

@@ -12,5 +12,26 @@ parts =
 recipe = zc.recipe.egg:custom
 egg = scipy
 environment = scipy-env
-setup-eggs = ${numpy:egg}
+setup-eggs =
+  ${cython:egg}
+  ${numpy:egg}
 rpath = ${numpy:rpath}
+
+[scipy:sys.version_info >= (3,8)]
+setup-eggs +=
+  pandas
+  pythran
+  pybind11
+
+[versions]
+scipy = 1.0.1
+pandas = 0.25.3
+
+[versions:sys.version_info >= (3,8)]
+pybind11 = 2.9.2
+scipy = 1.8.1
+beniget = 0.4.1
+gast = 0.5.3
+ply = 3.11
+pandas = 1.4.0
+pythran = 0.11.0:whl

software/jupyter/software.cfg

@@ -5,6 +5,7 @@ extends =
   ../../component/cythonplus/buildout.cfg
   ../../component/openssl/buildout.cfg
   ../../component/jupyter/buildout.cfg
+  ../../component/numpy/openblas.cfg
   ../../stack/monitor/buildout.cfg
 parts +=
   slapos-cookbook
@@ -69,8 +70,6 @@ nest-asyncio = 1.4.3
 nbclient = 0.5.1
 nbformat = 5.0.8
 notebook = 6.1.5
-numpy = 1.14.6
-pandas = 0.25.3
 pandocfilters = 1.4.3
 prompt-toolkit = 1.0.13
 ptyprocess = 0.5.1
@@ -95,7 +94,6 @@ pickleshare = 0.7.4
 prometheus-client = 0.9.0
 scandir = 1.5
 pytz = 2020.4
-scipy = 1.0.1
 singledispatch = 3.4.0.3
 wcwidth = 0.1.7
 jupyter = 1.0.0

software/kvm/software.cfg

@@ -43,6 +43,7 @@ parts = ${:common-parts}
 [python-with-eggs]
 recipe = zc.recipe.egg
 interpreter = ${:_buildout_section_name_}
+depends = ${numpy:recipe}
 eggs =
   ${slapos-toolbox:eggs}
   ${python-cffi:egg}